Contig 013818:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004K01Sequence251004456 (4)659013818 (4)ref|XP_009591120.1|89.7PREDICTED: probable transcription factor PosF21 [Nicotiana tomentosiformis]
JMFF004K07Sequence544004456 (4)700013818 (4)ref|XP_009591120.1|112PREDICTED: probable transcription factor PosF21 [Nicotiana tomentosiformis]
JMFF017M19Sequence571004456 (4)466013818 (4)
JMFF045G04Sequence641004456 (4)559013818 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF004K07+ CTGAGAACAGTGAACTTAAGCTGCGCTTGCAAACAATGGANCAACAAGTGCAC
rJMFF004K01+ CAACAAGTGCAC
                      ____________________________________________________________
consensus CTGAGAACAGTGAACTTAAGCTGCGCTTGCAAACAATGGANCAACAAGTGCAC
 
. : . : . : . : . : . :
rJMFF004K07+ TNGCAAGATGCCTTAAATGATGCTGTAAAAGAGGAGATACAGCATCTGAAAGTTTTANCG
rJMFF004K01+ TNGCAAGATGCNTTAAATGATGCTGTAAAAGAGGAGATACAGCATCTGAAAGTTTTANCG
                      ____________________________________________________________
consensus TNGCAAGATGCCTTAAATGATGCTGTAAAAGAGGAGATACAGCATCTGAAAGTTTTANCG
 
. : . : . : . : . : . :
rJMFF004K07+ GGGCAAGGCATGGCAAACGGTGGACCTATGATGATGAACTTCGGTCCATCCTTTGGAGCG
rJMFF004K01+ GGGCAAGGCATGGCAAACGGTGGACCTATGATGATGAACTTCGGTCCATCCTTTGGAGCG
rJMFF045G04+ CGGTCCATCCTTTGGAGCG
                      ____________________________________________________________
consensus GGGCAAGGCATGGCAAACGGTGGACCTATGATGATGAACTTCGGTCCATCCTTTGGAGCG
 
. : . : . : . : . : . :
rJMFF017M19+ CCATGCCATGCACACATTGTTAACGGCACATCAG
rJMFF004K07+ GGCCAGCAACAATTTTATCCCAACAACCATGCCATGCACACATTGTTAACGGCACATCAG
rJMFF004K01+ GGCCAGCAACAATTTTATCCCAACAACCATGCCATGCACACATTGTTAACGGCACATCAG
rJMFF045G04+ GGCCAGCAACAATTTTATCCCAACAACCATGCCATGCACACATTGTTAACGGCACATCAG
                      ____________________________________________________________
consensus GGCCAGCAACAATTTTATCCCAACAACCATGCCATGCACACATTGTTAACGGCACATCAG
 
. : . : . : . : . : . :
rJMFF017M19+ CTTCANCAGCTTCAGTTACATTCTCAAAAGCCGCNTNTTCAACAGCATCANTTACGCCCG
rJMFF004K07+ CTTCAACAGCTTCAGTTACATTCTCAAAAGCCGCCTTTTCAACAGCATCAANTACGCCCG
rJMFF004K01+ CTTCAACAGCTTCAGTTACATTCTCAAAAGCCGCCTTTTCAACAGCATCAANTACGCCCG
rJMFF045G04+ CTTCAACAGCTTCAGTTACATTTTCAAAAGCCGCCTTTTCAACAGCATCAACTACGCCCG
                      ____________________________________________________________
consensus CTTCAACAGCTTCAGTTACATTCTCAAAAGCCGCCTTTTCAACAGCATCAATTACGCCCG
 
. : . : . : . : . : . :
rJMFF017M19+ TTTCAACNGCAGCANCCNCNGCAGCAGCATCCGCNTCCTCTGCAGCCACAGGAACAACAT
rJMFF004K07+ TTTCAACTGCAGCAACCACCGCAGCAGCANCCGCCTCCTCTGCAGCCACAGGAACAACAT
rJMFF004K01+ TTTCAACTGCAGCAACCACCGCAGCAGCANCCGCCTCCTCTGCAGCCACAGGAACAACAT
rJMFF045G04+ TTTCAACTGCAGCAACCACCGCAGCAGCAACCGCCTCCTTTGCAGCCACAGGAACAACAT
                      ____________________________________________________________
consensus TTTCAACTGCAGCAACCACCGCAGCAGCATCCGCCTCCTCTGCAGCCACAGGAACAACAT
 
. : . : . : . : . : . :
rJMFF017M19+ NTGCNNCAAGGCGGGGANTCAAAGTTGAGAAGTTCAANGTCAGCAAGTGNTCTCNCNGAG
rJMFF004K07+ TTGCACCAAGGCGGGGACTCAAAGTTGNGAAGTTCAATGTCAGCAAGTGCTCTCACCGAG
rJMFF004K01+ TTGCACCAAGGCGGGGACTCAAAGTTGNGAAGTTCAATGTCAGCAAGTGCTCTCACCGAG
rJMFF045G04+ TTGCACCAAGGCGGGGACTCAAAGTTGCGAAGTTCAATGTCAGCAAGTGCTCTCACCGAG
                      ____________________________________________________________
consensus TTGCACCAAGGCGGGGACTCAAAGTTGCGAAGTTCAATGTCAGCAAGTGCTCTCACCGAG
 
. : . : . : . : . : . :
rJMFF017M19+ CATGCTTGTGACNCNTGCANTTCTANGAAGGAGTGAGATGAGANGGAAAGAAGTATGTTT
rJMFF004K07+ CATGCTTNTGACACCTGCACTTCTATGAAGGANTGAGATGAGATGGAAAGAAGTATGTTT
rJMFF004K01+ CATGCTTNTGACACCTGCACTTCTATGAAGGANTGAGATGAGATGGAAAGAAGTATGTTT
rJMFF045G04+ CATGCTTTTGACACCTGCACTTTTATGAAGGACTGAGATGAGATGGAAAGAAGTATGTTT
                      ____________________________________________________________
consensus CATGCTTTTGACACCTGCACTTCTATGAAGGAGTGAGATGAGATGGAAAGAAGTATGTTT
 
. : . : . : . : . : . :
rJMFF017M19+ TGTCNCNACGCNAGATAGTCGGTCCGAAATCTTTTATNGCCTTTGTAGCTCTGTCACTGT
rJMFF004K07+ TGTCCCAACGCTAGATAGTCGGTCCGAAATCTTTTATTGCCTTTGTAGCTCTCTCACTGT
rJMFF004K01+ TGTCCCAACGCTAGATAGTCGGTCCGAAATCTTTTATTGCCTTTGTAGCTCTCTCACTGT
rJMFF045G04+ TGTCCCAACGCTAGATAGTCGGTCCGAAATCTTTTATTGCCTTTGTAGCTCTCTCACTGT
                      ____________________________________________________________
consensus TGTCCCAACGCTAGATAGTCGGTCCGAAATCTTTTATTGCCTTTGTAGCTCTCTCACTGT
 
. : . : . : . : . : . :
rJMFF017M19+ NGATTTAGGATGCATCATGCATAGNCTCGCCCGCACNTTTATTCTATAATACTCAAGTGC
rJMFF004K07+ TGATTTAGGATGCATCATGCATAGACTCGCCCGCACCTTTATTCTATAATACTCAAGTGC
rJMFF004K01+ TGATTTAGGATGCATCATGCATAGACTCGCCCGCACCTTTATTCTATAATACTCAAGTGC
rJMFF045G04+ TGATTTAGGATGCATCATGCATAGACTCGCCCGCACCTTTATTCTATAATACTCAAGTGC
                      ____________________________________________________________
consensus TGATTTAGGATGCATCATGCATAGACTCGCCCGCACCTTTATTCTATAATACTCAAGTGC
 
. : . : . : . : . : . :
rJMFF017M19+ CCCTNGGAATCGTAGTTCGTTAAAATGATACTATTATTCAAATATTAAGTGCTCTATTGT
rJMFF004K07+ CCCTNGGAATCGTAGTTCGTTAAAATGATACTNTTATTCAAATATTAAGTGCTCTATTGT
rJMFF004K01+ CCCTNGGAATCGTAGTTCGTTAAAATGATACTNTTATTCAAATATTAAGTGCTCTATTGT
rJMFF045G04+ CCCTTGGAATCGTAGTTCGTTAAAATGATACTTTTATTCAAATATTAAGTGCTCTATTGT
                      ____________________________________________________________
consensus CCCTTGGAATCGTAGTTCGTTAAAATGATACTTTTATTCAAATATTAAGTGCTCTATTGT
 
. : . : . : . : . : . :
rJMFF017M19+ NTGNAGGTTATG
rJMFF004K07+ TTGTAGGTTATGCATGTGTTGTCT
rJMFF004K01+ TTGTAGGTTATGCATGTGTTGTC-TTTGAAGAAAGAAAGAAAGAAAGT
rJMFF045G04+ TTGTAGGTTATGCATGTGTTGTCTTTTGAAGAAAGAAAGAAAGAAAGTTCAATTTTGGGT
                      ____________________________________________________________
consensus TTGTAGGTTATGCATGTGTTGTCTTTTGAAGAAAGAAAGAAAGAAAGTTCAATTTTGGGT