Contig 013817:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007A14Sequence677013817 (3)emb|CDP02446.1|7e-80unnamed protein product [Coffea canephora]
JMFF014D03Sequence444004792 (6)emb|CDP02446.1|5e-46unnamed protein product [Coffea canephora]789013817 (3)emb|CDP02446.1|6e-107unnamed protein product [Coffea canephora]
JMFF045C09Sequence642004792 (6)emb|CDP02446.1|2e-94unnamed protein product [Coffea canephora]606013817 (3)emb|CDP02446.1|5e-63unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF014D03+                                                    GANCCCGAGATAATATGC
                      ____________________________________________________________
consensus                                                       GANCCCGAGATAATATGC
 
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rJMFF014D03+          AAGCATCTTGATCATATAAACATGCTAGGCCTCAACAAGACTACCCTTCGGCTACGTTTT
                      ____________________________________________________________
consensus             AAGCATCTTGATCATATAAACATGCTAGGCCTCAACAAGACTACCCTTCGGCTACGTTTT
 
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rJMFF007A14+                                           CTAAGATTGCCCGGTTCAAATGGCGAG
rJMFF014D03+          CTGATTAATTGGCTCGTGACCTCCTTGTTGCAACTAAGATTGCCCGGTTCAAATGGCGAG
                      ____________________________________________________________
consensus             CTGATTAATTGGCTCGTGACCTCCTTGTTGCAACTAAGATTGCCCGGTTCAAATGGCGAG
 
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rJMFF007A14+          GAAAGTCTACCTCTTGTTTACATTTATGGGCCCAAAATCAAATACGAAAGAGGTGCAGCA
rJMFF014D03+          GAAAGTCTACCTCTTGTTTACATTTATGGGCCCAAAATCAAATACGAAAGAGGTGCAGCA
rJMFF045C09+                                                                GCAGCA
                      ____________________________________________________________
consensus             GAAAGTCTACCTCTTGTTTACATTTATGGGCCCAAAATCAAATACGAAAGAGGTGCAGCA
 
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rJMFF007A14+          GTGGCTTTCAACGTGAGAGACAGAAATAAGGGTCTTATTAAGCCAGAAATTATCCAGAAG
rJMFF014D03+          GTGGCTTTCAACGTGAGAGACAGAAATAAGGGTCTTATTAAGCCAGAAATTATCCAGAAG
rJMFF045C09+          GTGGCTTTCAACGTGAGAGACAGAAATAAGGGTCTTATTAAGCCAGAAATTATCCAGAAG
                      ____________________________________________________________
consensus             GTGGCTTTCAACGTGAGAGACAGAAATAAGGGTCTTATTAAGCCAGAAATTATCCAGAAG
 
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rJMFF007A14+          CTGGCGGAGTTGCATGGTATCTATCTCGGCATTGGCATCCTCAGTCATATTCGAATTTTA
rJMFF014D03+          CTGGCGGAGTTGCATGGTATCTATCTCGGCATTGGCATCCTCAGTCATATTCGAATTTTA
rJMFF045C09+          CTGGCGGAGTTGCATGGTATCTATCTCGGCATTGGCATCCTCAGTCATATTCGAATTTTA
                      ____________________________________________________________
consensus             CTGGCGGAGTTGCATGGTATCTATCTCGGCATTGGCATCCTCAGTCATATTCGAATTTTA
 
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rJMFF007A14+          GATAGCCCGAAACAGCAGCGTGGAACTTCGAATCTCGAAGACACCTCCCTTTGCAAACCG
rJMFF014D03+          GATAGCCCGAAACAGCAGCGTGGAACTTCGAATCTCGAAGACACCTCCCTTTGCAAACCG
rJMFF045C09+          GATAGCCCGAAACAGCAGCGTGGAACTTCGAATCTCGAAGACACCTCCCTTTGCAAACCG
                      ____________________________________________________________
consensus             GATAGCCCGAAACAGCAGCGTGGAACTTCGAATCTCGAAGACACCTCCCTTTGCAAACCG
 
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rJMFF007A14+          ATGGAAAATGGTAGACAGGACAGTCGAAGTGGATTTATTAGAGTCGAGGTGATCACCGCC
rJMFF014D03+          ATGGAAAATGGTAGACAGGACAGTCGAAGTGGATTTATTAGAGTCGAGGTGATCACCGCC
rJMFF045C09+          ATGGAAAATGGTAGACAGGACAGTCGAAGTGGATTTATTAGAGTCGAGGTGATCACCGCC
                      ____________________________________________________________
consensus             ATGGAAAATGGTAGACAGGACAGTCGAAGTGGATTTATTAGAGTCGAGGTGATCACCGCC
 
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rJMFF007A14+          TCACTCGGCTTCCTCACAAATTTTGAAGACGTATACAAATTGTGGGCATTCGTGGCTAAG
rJMFF014D03+          TCACTCGGCTTCCTCACAAATTTTGAAGACGTATACAAATTGTGGGCATTCGTGGCTAAG
rJMFF045C09+          TCACTCGGCTTCCTCACAAATTTTGAAGACGTATACAAATTGTGGGCATTCGTGGCTAAG
                      ____________________________________________________________
consensus             TCACTCGGCTTCCTCACAAATTTTGAAGACGTATACAAATTGTGGGCATTCGTGGCTAAG
 
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rJMFF007A14+          TTTCTCAACCCAGATTTTATCAAAGATGGTGGCCTCCCAACTGTCGCAGAAGAGACCAAT
rJMFF014D03+          TTTCTCAACCCAGATTTTATCAAAGATGGTGGCCTCCCAACTGTCGCAGAAGAGACCAAT
rJMFF045C09+          TTTCTCAACCCAGATTTTATCAAAGATGGTGGCCTCCCAACTGTCGCAGAAGAGACCAAT
                      ____________________________________________________________
consensus             TTTCTCAACCCAGATTTTATCAAAGATGGTGGCCTCCCAACTGTCGCAGAAGAGACCAAT
 
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rJMFF007A14+          GCTTGAAATTTCAGGTGCCATAGAGAGTATGAAAGATTCAAATTGGATTCTTTTGCCCCC
rJMFF014D03+          GCTTGAAATTTCAGGTGCCATAGAGAGTATGAAAGATTCAAATTGGATTCTTTTGCCCCC
rJMFF045C09+          GCTTGAAATTTCAGGTGCCATAGAGAGTATGAAAGATTCAAATTGGATTCTTTTGCCCCC
                      ____________________________________________________________
consensus             GCTTGAAATTTCAGGTGCCATAGAGAGTATGAAAGATTCAAATTGGATTCTTTTGCCCCC
 
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rJMFF007A14+          TCCCCACCCCCTTGATGCTTGTGGGATAATTTGTTTGTTGATTCATGGTTTAAATTGCTC
rJMFF014D03+          TCCCCACCCCCTTGATGCTTGTGGGATAATTTGTTTGTTGATTCATGGTTTAAATTGCTC
rJMFF045C09+          TCCCCACCCCCTTGATGCTTGTGGGATAATTTGTTTGTTGATTCATGGTTTAAATTGCTC
                      ____________________________________________________________
consensus             TCCCCACCCCCTTGATGCTTGTGGGATAATTTGTTTGTTGATTCATGGTTTAAATTGCTC
 
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rJMFF007A14+          ATGCGTTTTCATTTTTACCCTTTTTGATATTGCTGTGGAATTGCGGTTAGAATCTTGTAT
rJMFF014D03+          ATGCGTTTTCATTTTTACCCTTTTTGATATTGCTGTGGAATTGCGGTTAGAATCTTGTAT
rJMFF045C09+          ATGCGTTTTCATTTTTACCCTTTTTGATATTGCTGTGGAATTGCGGTTAGAATCTTGTAT
                      ____________________________________________________________
consensus             ATGCGTTTTCATTTTTACCCTTTTTGATATTGCTGTGGAATTGCGGTTAGAATCTTGTAT
 
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rJMFF007A14+          TATTTTAGGTAGCAATGAAATGATGACTAAAGCAGGTATAAATCCACCCA          
rJMFF014D03+          TATTTTAGGTAGCAATGAAATGATGACTAAAGCAGGTATAAATCCACCCA          
rJMFF045C09+          TATTTTAGGTAGCAATGAAATGATGACTAAAGCAGGTATAAATCCACCCAATTTCCTCAT
                      ____________________________________________________________
consensus             TATTTTAGGTAGCAATGAAATGATGACTAAAGCAGGTATAAATCCACCCAATTTCCTCAT