Contig 013816:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF045B09-                                   AACGACCGGTGTTGGACTCGCAGTGTCGTCGTGGAT
JMSF031I06-                 GAGGGAGCTCTCTCTACAAACGACCGGTGTTGGACTCGCAGTGTCGTCGTGGAT
                      ____________________________________________________________
consensus                   GAGGGAGCTCTCTCTACAAACGACCGGTGTTGGACTCGCAGTGTCGTCGTGGAT
 
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JMFF045B09-           TTCTTATACCCTTTTTCTCGATCGGAAGCTTCCAAGTTTCATCCAAGATTACAAGCTAGA
JMSF031I06-           TTCTTATACCCTTTTTCTCGATCGGAAGCTTCCAAGTTTCATCCAAGATTACAAGCTAGA
                      ____________________________________________________________
consensus             TTCTTATACCCTTTTTCTCGATCGGAAGCTTCCAAGTTTCATCCAAGATTACAAGCTAGA
 
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JMFF045B09-           AAAGCTGGGATGGCGGGAGAGGATGGTATTGATATGTCAGCTCTGAAGTCCGAATTGACC
JMSF031I06-           AAAGCTGGGATGGCGGGAGAGGATGGTATTGATATGTCAGCTCTGAAGTCCGAATTGACC
                      ____________________________________________________________
consensus             AAAGCTGGGATGGCGGGAGAGGATGGTATTGATATGTCAGCTCTGAAGTCCGAATTGACC
 
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JMFF045B09-           GAAACTGATATTAATTGGAAACAAGAAATGGAAAAGAGCCAGTGCGAGGTGGATGCATTG
JMSF031I06-           GAAACTGATATTAATTGGAAACAAGAAATGGAAAAGAGCCAGTGCGAGGTGGATGCATTG
                      ____________________________________________________________
consensus             GAAACTGATATTAATTGGAAACAAGAAATGGAAAAGAGCCAGTGCGAGGTGGATGCATTG
 
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JMFF045B09-           CAAGCAAAACTTTTCGAGGTAAAAGATTGCACAAAGGATTCAGAAGAAGATGGAAAGAAG
JMSF031I06-           CAAGCAAAACTTTTCGAGGTAAAAGATTGCACAAAGGATTCAGAAGAAGATGGAAAGAAG
                      ____________________________________________________________
consensus             CAAGCAAAACTTTTCGAGGTAAAAGATTGCACAAAGGATTCAGAAGAAGATGGAAAGAAG
 
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JMFF045B09-           GAGTTAGATGTTCTCTGGCGAAGAGTCAGAACTGCTGCAACATTGATGACACACTTGAAA
JMSF031I06-           GAGTTAGATGTTCTCTGGCGAAGAGTCAGAACTGCTGCAACATTGATGACACACTTGAAA
                      ____________________________________________________________
consensus             GAGTTAGATGTTCTCTGGCGAAGAGTCAGAACTGCTGCAACATTGATGACACACTTGAAA
 
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JMFF045B09-           GTAAAAGCTAGAGTCCTTGCTGTTCCTCATTTGGCCCATATGATATGTGGTATCAAACAA
JMSF031I06-           GTAAAAGCTAGAGTCCTTGCTGTTCCTCATTTGGCCCATATGATATGTGGTATCAAACAA
                      ____________________________________________________________
consensus             GTAAAAGCTAGAGTCCTTGCTGTTCCTCATTTGGCCCATATGATATGTGGTATCAAACAA
 
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JMFF045B09-           CTAGATGGAACGGGACTTGTTGACAGAAATGGCATTCCATTGCCGGGCTGGTCTAGGGAT
JMSF031I06-           CTAGATGGAACGGGACTTGTTGACAGAAATGGCATTCCATTGCCGGGCTGGTCTAGGGAT
                      ____________________________________________________________
consensus             CTAGATGGAACGGGACTTGTTGACAGAAATGGCATTCCATTGCCGGGCTGGTCTAGGGAT
 
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JMFF045B09-           GTAGATCTACCCGCTTTTGATGATTCAGATGAGGAAGCATGGATTANACATTCTAGTGAA
JMSF031I06-           GTAGATCTACCCGCTTTTGATGATTCAGATGAGGAAGCATGGATTAAACATTCTAGTGAA
                      ____________________________________________________________
consensus             GTAGATCTACCCGCTTTTGATGATTCAGATGAGGAAGCATGGATTAAACATTCTAGTGAA
 
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JMFF045B09-           CAAGGTTCTCTCCATGATCAAGATGGAGCTTATATTACTGAATTACTGAGGTGTGTACAG
JMSF031I06-           CAAGGTTCTCTCCATGATCAAGATGGAGCTTATATTACTGAATTACTGAGGTGTGTACAG
rJMSF031I06+                                             TACTGNATTACTGAGGTGTGTACAG
                      ____________________________________________________________
consensus             CAAGGTTCTCTCCATGATCAAGATGGAGCTTATATTACTGAATTACTGAGGTGTGTACAG
 
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JMFF045B09-           ACAGTTACAGACGTTATGGAAAATCTTGTTAAGAGGGTTATACTGGCTGAAT        
JMSF031I06-           ACAGTTACAGACGTTATGGAAAATCTTGTTAAGAGGGTTATACTGGCTGAATCGGAGACT
rJMSF031I06+          ACAGTTACAGACGTTATGGAAAATCTTGTTAAGAGGGTTATACTGGCTGAATCGGAGACT
                      ____________________________________________________________
consensus             ACAGTTACAGACGTTATGGAAAATCTTGTTAAGAGGGTTATACTGGCTGAATCGGAGACT
 
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JMSF031I06-           GCTGTTGAGAA                                                 
rJMSF031I06+          GCTGTTGAGAAGAAGAAGGTGACTGTAGGTGAGGAAGAGATTAGAAAGAAGGCACTCGAA
                      ____________________________________________________________
consensus             GCTGTTGAGAAGAAGAAGGTGACTGTAGGTGAGGAAGAGATTAGAAAGAAGGCACTCGAA
 
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rJMSF031I06+          ATTGAAAACATGTCTATTAAGTTAGAAGAGATGGAAAGATTTGCAATGGGTACAAACTGT
                      ____________________________________________________________
consensus             ATTGAAAACATGTCTATTAAGTTAGAAGAGATGGAAAGATTTGCAATGGGTACAAACTGT
 
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rJMSF031I06+          ATCTTAAATGAGATGCGCCAGAGAGTTGAAGATTTAGTTGAAGAAACATCTCAACAGAGG
rJMFF045B09+                   GAGATGCGCCAGAGAGTTGAAGATTTAGTTGAAGAAACATCTCAACAGAGG
                      ____________________________________________________________
consensus             ATCTTAAATGAGATGCGCCAGAGAGTTGAAGATTTAGTTGAAGAAACATCTCAACAGAGG
 
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rJMSF031I06+          CAAAGAGCTGCAGAAAATGAGCAAGAGCTTTGTCGTGTTAAGCGAGACTTTGAATCTCTG
rJMFF045B09+          CAAAGAGCTGCAGAAAATGAGCAAGAGCTTNGTCGTGTTAAGCGAGACTTTGAATCTCTG
                      ____________________________________________________________
consensus             CAAAGAGCTGCAGAAAATGAGCAAGAGCTTTGTCGTGTTAAGCGAGACTTTGAATCTCTG
 
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rJMSF031I06+          AAGACGTATGTTAATAGTCTTATTAGTGTGAGAGAAACACTCCTCTCATCAGAAAAGCAG
rJMFF045B09+          AAGACGTATGTTAATAGTCTTATTAGTGTGAGAGAAACACTCCTCTCATCAG-AAAGCAG
                      ____________________________________________________________
consensus             AAGACGTATGTTAATAGTCTTATTAGTGTGAGAGAAACACTCCTCTCATCAGAAAAGCAG
 
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rJMSF031I06+          TTTCAGACAATTGAAAGGCTCTTTGAACGGCTGGTTGAGAAAACAACTCAGTTGGAGAGT
rJMFF045B09+          TTTCAGACAATTGAAAGGCTCTTTGAACGGCTGGTTGAGAAAACAACTCAGTTGGAGAGT
                      ____________________________________________________________
consensus             TTTCAGACAATTGAAAGGCTCTTTGAACGGCTGGTTGAGAAAACAACTCAGTTGGAGAGT
 
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rJMSF031I06+          GAGAAGATGCAAAAAGAGGCCGAAGTACAGAAGCTTATGGAAGAGAATGTGAAGTTAACT
rJMFF045B09+          GAGAAGATGCAAAAAGAGGCCGAAGTACAGAAGCTTATGGAAGAGAATGTGAAGTTAACT
                      ____________________________________________________________
consensus             GAGAAGATGCAAAAAGAGGCCGAAGTACAGAAGCTTATGGAAGAGAATGTGAAGTTAACT
 
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rJMSF031I06+          GCTTTACTTGACAAGAAAGAGGCCCAACTCCTAGCAATGAATGAACAATGCAAGGTTATG
rJMFF045B09+          GCTTTACTTGACAAGAAAGAGGCCCAACTCCTAGCAATGAATGAACAATGCAAGGTTATG
                      ____________________________________________________________
consensus             GCTTTACTTGACAAGAAAGAGGCCCAACTCCTAGCAATGAATGAACAATGCAAGGTTATG
 
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rJMSF031I06+          GCACTGAGTGCTT                                               
rJMFF045B09+          GCACTGAGTGCTTCTAATATCTAGTTTGACATGCTTATACAGATGCCATCTTTATCACAT
                      ____________________________________________________________
consensus             GCACTGAGTGCTTCTAATATCTAGTTTGACATGCTTATACAGATGCCATCTTTATCACAT
 
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rJMFF045B09+          TGACCTCACCTTAACACCTGTTATCCTTCCAGAAGATTAAGGTGAGTTTAGCAGATGAAT
                      ____________________________________________________________
consensus             TGACCTCACCTTAACACCTGTTATCCTTCCAGAAGATTAAGGTGAGTTTAGCAGATGAAT
 
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rJMFF045B09+          TCTGTTTTGGCTTCTGTTCTTGACTACAATCCAAGAGAACCCATTGCCTGTAATTGTGCT
                      ____________________________________________________________
consensus             TCTGTTTTGGCTTCTGTTCTTGACTACAATCCAAGAGAACCCATTGCCTGTAATTGTGCT
 
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rJMFF045B09+          GTATTGGCTCATTGAGCGAAGTAATCCCATTAACTAGACACAATTGTACTTAAATCTAAT
                      ____________________________________________________________
consensus             GTATTGGCTCATTGAGCGAAGTAATCCCATTAACTAGACACAATTGTACTTAAATCTAAT
 
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rJMFF045B09+          AGAAAATGTTGTTGCATCTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             AGAAAATGTTGTTGCATCTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG