Contig 013813:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023I12Sequence458006027 (4)ref|XP_009589862.1|1e-07PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tomentosiformis] ref|XP_00958986719013813 (5)ref|XP_011085765.1|1e-60PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 31-like [Sesamum indicum]
JMFF024K04Sequence528006027 (4)ref|XP_009589862.1|9e-16PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tomentosiformis] ref|XP_00958986765013813 (5)ref|XP_011085765.1|2e-63PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 31-like [Sesamum indicum]
JMFF035H15Sequence552006027 (4)ref|XP_009589862.1|8e-20PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tomentosiformis] ref|XP_00958986669013813 (5)ref|XP_011085765.1|3e-57PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 31-like [Sesamum indicum]
JMFF044C23Sequence636006027 (4)ref|XP_009589862.1|2e-40PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tomentosiformis] ref|XP_00958986592013813 (5)ref|XP_009589862.1|4e-39PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tomentosiformis] ref|XP_00958986
JMFN037E07Sequence208013813 (5)ref|XP_009593218.1|115PREDICTED: protein IQ-DOMAIN 31-like isoform X2 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF024K04+                                            GGTTCGCGAGCAAGTAGTTGTTGATT
                      ____________________________________________________________
consensus                                               GGTTCGCGAGCAAGTAGTTGTTGATT
 
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rJMFF024K04+          CTTCAGACCTGACTACTGACTNTAAGATTGAAGTTGACGAATTGGCTGTGATTGAACCCT
                      ____________________________________________________________
consensus             CTTCAGACCTGACTACTGACTNTAAGATTGAAGTTGACGAATTGGCTGTGATTGAACCCT
 
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rJMFF024K04+          CTCCAAAACCTTCTACAGTTGATGACAATCCAGTAGATGTATTGCAGAATCATAT-CCCT
rJMFF035H15+                          AGTTGATGACAATCCAGTAGATGTATTGCAGAATCATATCCCCT
rJMFF023I12+                          AGTTGATGACAATCCAGTAGATGTATTGCAGAATCATAT-CCCT
                      ____________________________________________________________
consensus             CTCCAAAACCTTCTACAGTTGATGACAATCCAGTAGATGTATTGCAGAATCATAT-CCCT
 
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rJMFF024K04+          GTTGAACAGTTGCTGCCTGAAAATGGTGAGAGGGGCGAGACAATACCCGCAGTAATGGAG
rJMFF035H15+          GTTGAACAGTTGCTGCCTGAAAATGGTGAGAGGGGCGAGACAATACCCGCAGTAATGGAG
rJMFF023I12+          GTTGAACAGTTGCTGCCTGAAAATGGTGAGAGGGGCGAGACAATACCCGCAGTAATGGAG
                      ____________________________________________________________
consensus             GTTGAACAGTTGCTGCCTGAAAATGGTGAGAGGGGCGAGACAATACCCGCAGTAATGGAG
 
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rJMFF024K04+          GAACTTACCTCCAAGGAGGATCAAACTAGCAAGGAAAGCCAGAGAACTAGGAGAAGGAGA
rJMFF035H15+          GAACTTACCTCCAAGGAGGATCAAACTAGCAAGGAAAGCCAGAGAACTAGGAGAAGGAGA
rJMFF023I12+          GAACTTACCTCCAAGGAGGATCAAACTAGCAAGGAAAGCCAGAGAACTAGGAGAAGGAGA
                      ____________________________________________________________
consensus             GAACTTACCTCCAAGGAGGATCAAACTAGCAAGGAAAGCCAGAGAACTAGGAGAAGGAGA
 
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rJMFF024K04+          TCTCTTCCAGCAAAGCAGGAACAGACTGAAAATATTTCACAAAATGCACCAAGCTTGCCT
rJMFF035H15+          TCTCTTCCAGCAAAGCAGGAACAGACTGAAAATATTTCACAAAATGCACCAAGCTTGCCT
JMFN037E07-                                            ATTTCACAAAATGCACCAAGCTTGCCT
rJMFF023I12+          TCTCTTCCAGCAAAGCAGGAACAGACTGAAAATATTTCACAAAATGCACCAAGCTTGCCT
rJMFF044C23+                 CAGCAAAGCATGAACAGACTGAAAAT-TTTCACAAAATGCACCAAGCTTGCCT
                      ____________________________________________________________
consensus             TCTCTTCCAGCAAAGCAGGAACAGACTGAAAATATTTCACAAAATGCACCAAGCTTGCCT
 
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rJMFF024K04+          AGCTATATGGCAGCGACTGAATCTGCAAAGGCTAAGCTTAAAGCACAGGGAACTACTAGA
rJMFF035H15+          AGCTATATGGCAGCGACTGAATCTGCAAAGGCTAAGCTTAAAGCACAGGGAACTACTAGA
JMFN037E07-           AGCTATATGGCAGCGACTGAATCTGCAAAGGCTAAGCTTAAAGCACAGGGAACTACTAGA
rJMFF023I12+          AGCTATATGGCAGCGACTGAATCTGCAAAGGCTAAGCTTAAAGCACAGGGAACTACTAGA
rJMFF044C23+          AGCTATATGGCAGCGACTGAATCTGCAAAGGCTAAGCTTAAAGCACAGGGAACTACTAGA
                      ____________________________________________________________
consensus             AGCTATATGGCAGCGACTGAATCTGCAAAGGCTAAGCTTAAAGCACAGGGAACTACTAGA
 
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rJMFF024K04+          TCTACTGAAGATGAGGCTGAAAATGGATTTGTCAGACGGCATTCACTACCATCCTTGACC
rJMFF035H15+          TCTACTGAAGATGAGGCTGAAAATGGATTTGTCAGACGGCATTCACTACCATCCTTGACC
JMFN037E07-           TCTACTGAAGATGAGGCTGAAAATGGATTTGTCAGACGGCATTCACTACCATCCTTGACC
rJMFF023I12+          TCTACTGAAGATGAGGCTGAAAATGGATTTGTCAGACGGCATTCACTACCATCCTTGACC
rJMFF044C23+          TCTACTGAAGATAAGGCTGAAAATGGATTTGTCAGACGGCATTCACTACCATCCTTGACC
                      ____________________________________________________________
consensus             TCTACTGAAGATGAGGCTGAAAATGGATTTGTCAGACGGCATTCACTACCATCCTTGACC
 
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rJMFF024K04+          AAAGGAAAACTCAACTCACTGTCTCCTCGGGTGCAGCGGCCAGTGCAAGCAAATGGCAAA
rJMFF035H15+          AAAGGAAAACTCAACTCACTGTCTCCTCGGGTGCAGCGGCCAGTGCAAGCAAATGGCAAA
JMFN037E07-           AATGGAAAACTCAACTCACTGTCTCCTCGGGTGCAGCGGCCAGTGCAAGCAAATGGCAAA
rJMFF023I12+          AATGGAAAACTCAACTCACTGTCTCCTCGGGTGCAGCGGCCAGTGCAAGCAAATGGCAAA
rJMFF044C23+          AATGGAAAACTCAACTCACTGTCTCCTCGGGTGCAGCGGCCAGTGCAAGCAAATGGCAAA
                      ____________________________________________________________
consensus             AATGGAAAACTCAACTCACTGTCTCCTCGGGTGCAGCGGCCAGTGCAAGCAAATGGCAAA
 
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rJMFF024K04+          GGAGGAAACAAACCCAACAGATCAGTGTCTTCCACTAGAGATGAAAAGGCGCTTCAGCCT
rJMFF035H15+          GGAGGAAACAAACCCAACAGATCAGTGTCTTCCACTAGAGATGAAAAGGCGCTTCAGCCT
JMFN037E07-           G                                                           
rJMFF023I12+          GGAGGAAACAAACCCAACAGATCAGTGTCTTCCACTAGAGATGAAAAGGCGCTTCAGCCT
rJMFF044C23+          GGAGGAAACAAACCCAACAGATCAGTGTCTTCCACTAGAGATGAAAAGGCGCTTCAGCCT
                      ____________________________________________________________
consensus             GGAGGAAACAAACCCAACAGATCAGTGTCTTCCACTAGAGATGAAAAGGCGCTTCAGCCT
 
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rJMFF024K04+          GGTTGGAGGAGATGAGTTCAAGAATCCTCTCACCGGAGTGTGGAGGTCCATTGTGAGGCT
rJMFF035H15+          GGTTGGAGGAGATGAGTTCAAGAATCCTCTCACCGGAGTGTGGAGGTCCATTGTGAGGCT
rJMFF023I12+          GGTTGGAGGAGATGAGTTCAAGAATCCTCTCACCGGAGTGTGGAGGTCCATTGTGAGGCT
rJMFF044C23+          GGTTGGAGGAGATGAGTTCAAGAATCCTCTCACCGGAGTGTGGAGGTCCATTGTGAGGCT
                      ____________________________________________________________
consensus             GGTTGGAGGAGATGAGTTCAAGAATCCTCTCACCGGAGTGTGGAGGTCCATTGTGAGGCT
 
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rJMFF024K04+          GTTTCATTTGGTTGTGCAATCTCTGTTGTGTAAAAGATTAGACTGAACTTAGCTTAATAT
rJMFF035H15+          GTTTCATTTGGTTGTGCAATCTCTGTTGTGTAAAAGATTAGACTGAACTTAGCTTAATAT
rJMFF023I12+          GTTTCATTTGGTTGTGCAATCTCTGTTGTGTAAAAGATTAGACTGAACTTAGCTTAATAT
rJMFF044C23+          GTTTCATTTGGTTGTGCAATCTCTGTTGTGTAAAAGATTAGACTGAACTTAGCTTAATAT
                      ____________________________________________________________
consensus             GTTTCATTTGGTTGTGCAATCTCTGTTGTGTAAAAGATTAGACTGAACTTAGCTTAATAT
 
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rJMFF024K04+          AATTTGTGTCACTCCCAGGCTTCCCATCATAGGCTTGGACTGTTAAAAGGGGAATGTATA
rJMFF035H15+          AATTTGTGTCACTCCCAGGCTTCCCATCATAGGCTTGGACTGTTAAAAGGGGAATGTATA
rJMFF023I12+          AATTTGTGTCACTCCCAGGCTTCCCATCATAGGCTTGGACTGTTAAAAGGGGAATGTATA
rJMFF044C23+          AATTTGTGTCACTCCCAGGCTTCCCATCATAGGCTTGGACTGTTAAAAGGGGAATGTATA
                      ____________________________________________________________
consensus             AATTTGTGTCACTCCCAGGCTTCCCATCATAGGCTTGGACTGTTAAAAGGGGAATGTATA
 
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rJMFF024K04+          GCGATAGACTCCGAGAGAAT                                        
rJMFF035H15+          GCGATAGACTCCGAGAGAAT                                        
rJMFF023I12+          GCGATAGACTCCGAGAGAATGTCATTTTACAGTTGGTGTGCTGTTTTTTGTTTCTGTTTT
rJMFF044C23+          GCGATAGACTCCGAGAGAATGTCATTTTACAGTTGGTGTGCTGTTTTTTGTTTCTGTTTT
                      ____________________________________________________________
consensus             GCGATAGACTCCGAGAGAATGTCATTTTACAGTTGGTGTGCTGTTTTTTGTTTCTGTTTT
 
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rJMFF023I12+          GTAATGTGCAGATGCT                                            
rJMFF044C23+          GTAATGTGCAGATGCTTGACTCATGAATCTCTTGCTACAGGTTTGCTGTGTGTTTTTTTT
                      ____________________________________________________________
consensus             GTAATGTGCAGATGCTTGACTCATGAATCTCTTGCTACAGGTTTGCTGTGTGTTTTTTTT