clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF023I12 | Sequence | 458 | 006027 (4) | ref|XP_009589862.1| | 1e-07 | PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tomentosiformis] ref|XP_00958986 | 719 | 013813 (5) | ref|XP_011085765.1| | 1e-60 | PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 31-like [Sesamum indicum] |
JMFF024K04 | Sequence | 528 | 006027 (4) | ref|XP_009589862.1| | 9e-16 | PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tomentosiformis] ref|XP_00958986 | 765 | 013813 (5) | ref|XP_011085765.1| | 2e-63 | PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 31-like [Sesamum indicum] |
JMFF035H15 | Sequence | 552 | 006027 (4) | ref|XP_009589862.1| | 8e-20 | PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tomentosiformis] ref|XP_00958986 | 669 | 013813 (5) | ref|XP_011085765.1| | 3e-57 | PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 31-like [Sesamum indicum] |
JMFF044C23 | Sequence | 636 | 006027 (4) | ref|XP_009589862.1| | 2e-40 | PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tomentosiformis] ref|XP_00958986 | 592 | 013813 (5) | ref|XP_009589862.1| | 4e-39 | PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tomentosiformis] ref|XP_00958986 |
JMFN037E07 | Sequence | 208 | 013813 (5) | ref|XP_009593218.1| | 115 | PREDICTED: protein IQ-DOMAIN 31-like isoform X2 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF024K04+ GGTTCGCGAGCAAGTAGTTGTTGATT
____________________________________________________________
consensus GGTTCGCGAGCAAGTAGTTGTTGATT
. : . : . : . : . : . :
rJMFF024K04+ CTTCAGACCTGACTACTGACTNTAAGATTGAAGTTGACGAATTGGCTGTGATTGAACCCT
____________________________________________________________
consensus CTTCAGACCTGACTACTGACTNTAAGATTGAAGTTGACGAATTGGCTGTGATTGAACCCT
. : . : . : . : . : . :
rJMFF024K04+ CTCCAAAACCTTCTACAGTTGATGACAATCCAGTAGATGTATTGCAGAATCATAT-CCCT
rJMFF035H15+ AGTTGATGACAATCCAGTAGATGTATTGCAGAATCATATCCCCT
rJMFF023I12+ AGTTGATGACAATCCAGTAGATGTATTGCAGAATCATAT-CCCT
____________________________________________________________
consensus CTCCAAAACCTTCTACAGTTGATGACAATCCAGTAGATGTATTGCAGAATCATAT-CCCT
. : . : . : . : . : . :
rJMFF024K04+ GTTGAACAGTTGCTGCCTGAAAATGGTGAGAGGGGCGAGACAATACCCGCAGTAATGGAG
rJMFF035H15+ GTTGAACAGTTGCTGCCTGAAAATGGTGAGAGGGGCGAGACAATACCCGCAGTAATGGAG
rJMFF023I12+ GTTGAACAGTTGCTGCCTGAAAATGGTGAGAGGGGCGAGACAATACCCGCAGTAATGGAG
____________________________________________________________
consensus GTTGAACAGTTGCTGCCTGAAAATGGTGAGAGGGGCGAGACAATACCCGCAGTAATGGAG
. : . : . : . : . : . :
rJMFF024K04+ GAACTTACCTCCAAGGAGGATCAAACTAGCAAGGAAAGCCAGAGAACTAGGAGAAGGAGA
rJMFF035H15+ GAACTTACCTCCAAGGAGGATCAAACTAGCAAGGAAAGCCAGAGAACTAGGAGAAGGAGA
rJMFF023I12+ GAACTTACCTCCAAGGAGGATCAAACTAGCAAGGAAAGCCAGAGAACTAGGAGAAGGAGA
____________________________________________________________
consensus GAACTTACCTCCAAGGAGGATCAAACTAGCAAGGAAAGCCAGAGAACTAGGAGAAGGAGA
. : . : . : . : . : . :
rJMFF024K04+ TCTCTTCCAGCAAAGCAGGAACAGACTGAAAATATTTCACAAAATGCACCAAGCTTGCCT
rJMFF035H15+ TCTCTTCCAGCAAAGCAGGAACAGACTGAAAATATTTCACAAAATGCACCAAGCTTGCCT
JMFN037E07- ATTTCACAAAATGCACCAAGCTTGCCT
rJMFF023I12+ TCTCTTCCAGCAAAGCAGGAACAGACTGAAAATATTTCACAAAATGCACCAAGCTTGCCT
rJMFF044C23+ CAGCAAAGCATGAACAGACTGAAAAT-TTTCACAAAATGCACCAAGCTTGCCT
____________________________________________________________
consensus TCTCTTCCAGCAAAGCAGGAACAGACTGAAAATATTTCACAAAATGCACCAAGCTTGCCT
. : . : . : . : . : . :
rJMFF024K04+ AGCTATATGGCAGCGACTGAATCTGCAAAGGCTAAGCTTAAAGCACAGGGAACTACTAGA
rJMFF035H15+ AGCTATATGGCAGCGACTGAATCTGCAAAGGCTAAGCTTAAAGCACAGGGAACTACTAGA
JMFN037E07- AGCTATATGGCAGCGACTGAATCTGCAAAGGCTAAGCTTAAAGCACAGGGAACTACTAGA
rJMFF023I12+ AGCTATATGGCAGCGACTGAATCTGCAAAGGCTAAGCTTAAAGCACAGGGAACTACTAGA
rJMFF044C23+ AGCTATATGGCAGCGACTGAATCTGCAAAGGCTAAGCTTAAAGCACAGGGAACTACTAGA
____________________________________________________________
consensus AGCTATATGGCAGCGACTGAATCTGCAAAGGCTAAGCTTAAAGCACAGGGAACTACTAGA
. : . : . : . : . : . :
rJMFF024K04+ TCTACTGAAGATGAGGCTGAAAATGGATTTGTCAGACGGCATTCACTACCATCCTTGACC
rJMFF035H15+ TCTACTGAAGATGAGGCTGAAAATGGATTTGTCAGACGGCATTCACTACCATCCTTGACC
JMFN037E07- TCTACTGAAGATGAGGCTGAAAATGGATTTGTCAGACGGCATTCACTACCATCCTTGACC
rJMFF023I12+ TCTACTGAAGATGAGGCTGAAAATGGATTTGTCAGACGGCATTCACTACCATCCTTGACC
rJMFF044C23+ TCTACTGAAGATAAGGCTGAAAATGGATTTGTCAGACGGCATTCACTACCATCCTTGACC
____________________________________________________________
consensus TCTACTGAAGATGAGGCTGAAAATGGATTTGTCAGACGGCATTCACTACCATCCTTGACC
. : . : . : . : . : . :
rJMFF024K04+ AAAGGAAAACTCAACTCACTGTCTCCTCGGGTGCAGCGGCCAGTGCAAGCAAATGGCAAA
rJMFF035H15+ AAAGGAAAACTCAACTCACTGTCTCCTCGGGTGCAGCGGCCAGTGCAAGCAAATGGCAAA
JMFN037E07- AATGGAAAACTCAACTCACTGTCTCCTCGGGTGCAGCGGCCAGTGCAAGCAAATGGCAAA
rJMFF023I12+ AATGGAAAACTCAACTCACTGTCTCCTCGGGTGCAGCGGCCAGTGCAAGCAAATGGCAAA
rJMFF044C23+ AATGGAAAACTCAACTCACTGTCTCCTCGGGTGCAGCGGCCAGTGCAAGCAAATGGCAAA
____________________________________________________________
consensus AATGGAAAACTCAACTCACTGTCTCCTCGGGTGCAGCGGCCAGTGCAAGCAAATGGCAAA
. : . : . : . : . : . :
rJMFF024K04+ GGAGGAAACAAACCCAACAGATCAGTGTCTTCCACTAGAGATGAAAAGGCGCTTCAGCCT
rJMFF035H15+ GGAGGAAACAAACCCAACAGATCAGTGTCTTCCACTAGAGATGAAAAGGCGCTTCAGCCT
JMFN037E07- G
rJMFF023I12+ GGAGGAAACAAACCCAACAGATCAGTGTCTTCCACTAGAGATGAAAAGGCGCTTCAGCCT
rJMFF044C23+ GGAGGAAACAAACCCAACAGATCAGTGTCTTCCACTAGAGATGAAAAGGCGCTTCAGCCT
____________________________________________________________
consensus GGAGGAAACAAACCCAACAGATCAGTGTCTTCCACTAGAGATGAAAAGGCGCTTCAGCCT
. : . : . : . : . : . :
rJMFF024K04+ GGTTGGAGGAGATGAGTTCAAGAATCCTCTCACCGGAGTGTGGAGGTCCATTGTGAGGCT
rJMFF035H15+ GGTTGGAGGAGATGAGTTCAAGAATCCTCTCACCGGAGTGTGGAGGTCCATTGTGAGGCT
rJMFF023I12+ GGTTGGAGGAGATGAGTTCAAGAATCCTCTCACCGGAGTGTGGAGGTCCATTGTGAGGCT
rJMFF044C23+ GGTTGGAGGAGATGAGTTCAAGAATCCTCTCACCGGAGTGTGGAGGTCCATTGTGAGGCT
____________________________________________________________
consensus GGTTGGAGGAGATGAGTTCAAGAATCCTCTCACCGGAGTGTGGAGGTCCATTGTGAGGCT
. : . : . : . : . : . :
rJMFF024K04+ GTTTCATTTGGTTGTGCAATCTCTGTTGTGTAAAAGATTAGACTGAACTTAGCTTAATAT
rJMFF035H15+ GTTTCATTTGGTTGTGCAATCTCTGTTGTGTAAAAGATTAGACTGAACTTAGCTTAATAT
rJMFF023I12+ GTTTCATTTGGTTGTGCAATCTCTGTTGTGTAAAAGATTAGACTGAACTTAGCTTAATAT
rJMFF044C23+ GTTTCATTTGGTTGTGCAATCTCTGTTGTGTAAAAGATTAGACTGAACTTAGCTTAATAT
____________________________________________________________
consensus GTTTCATTTGGTTGTGCAATCTCTGTTGTGTAAAAGATTAGACTGAACTTAGCTTAATAT
. : . : . : . : . : . :
rJMFF024K04+ AATTTGTGTCACTCCCAGGCTTCCCATCATAGGCTTGGACTGTTAAAAGGGGAATGTATA
rJMFF035H15+ AATTTGTGTCACTCCCAGGCTTCCCATCATAGGCTTGGACTGTTAAAAGGGGAATGTATA
rJMFF023I12+ AATTTGTGTCACTCCCAGGCTTCCCATCATAGGCTTGGACTGTTAAAAGGGGAATGTATA
rJMFF044C23+ AATTTGTGTCACTCCCAGGCTTCCCATCATAGGCTTGGACTGTTAAAAGGGGAATGTATA
____________________________________________________________
consensus AATTTGTGTCACTCCCAGGCTTCCCATCATAGGCTTGGACTGTTAAAAGGGGAATGTATA
. : . : . : . : . : . :
rJMFF024K04+ GCGATAGACTCCGAGAGAAT
rJMFF035H15+ GCGATAGACTCCGAGAGAAT
rJMFF023I12+ GCGATAGACTCCGAGAGAATGTCATTTTACAGTTGGTGTGCTGTTTTTTGTTTCTGTTTT
rJMFF044C23+ GCGATAGACTCCGAGAGAATGTCATTTTACAGTTGGTGTGCTGTTTTTTGTTTCTGTTTT
____________________________________________________________
consensus GCGATAGACTCCGAGAGAATGTCATTTTACAGTTGGTGTGCTGTTTTTTGTTTCTGTTTT
. : . : . : . : . : . :
rJMFF023I12+ GTAATGTGCAGATGCT
rJMFF044C23+ GTAATGTGCAGATGCTTGACTCATGAATCTCTTGCTACAGGTTTGCTGTGTGTTTTTTTT
____________________________________________________________
consensus GTAATGTGCAGATGCTTGACTCATGAATCTCTTGCTACAGGTTTGCTGTGTGTTTTTTTT