Contig 013812:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032E15Sequence571006071 (8)ref|XP_009799147.1|4e-73PREDICTED: fasciclin-like arabinogalactan protein 2 [Nicotiana sylvestris]130013812 (4)
JMFF044C10Sequence654006071 (8)ref|XP_009799147.1|3e-76PREDICTED: fasciclin-like arabinogalactan protein 2 [Nicotiana sylvestris]639013812 (4)
JMFF050J06Sequence632006071 (8)ref|XP_009799147.1|2e-76PREDICTED: fasciclin-like arabinogalactan protein 2 [Nicotiana sylvestris]528013812 (4)gb|EPS69372.1|4e-29fasciclin-like arabinogalactan protein 19, partial [Genlisea aurea]
JMFN016I04Sequence455013812 (4)emb|CDP18905.1|3e-19unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF050J06+                  TCCCGATTTACCACTCCCTCGCGATGCTGAAATCCAGCAACGGCCTAGTGAA
                      ____________________________________________________________
consensus                     TCCCGATTTACCACTCCCTCGCGATGCTGAAATCCAGCAACGGCCTAGTGAA
 
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JMFN016I04-           CACCCTCGCGACGGAGGGATCCAACAAGTACGACATCACCGTCAAAAACGACGGCGAAAC
rJMFF050J06+          CACCCTCGCGACGGAGGGATCCAACAAGTACGACATCACCGTCAAAAACGACGGCGAAAC
                      ____________________________________________________________
consensus             CACCCTCGCGACGGAGGGATCCAACAAGTACGACATCACCGTCAAAAACGACGGCGAAAC
 
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JMFN016I04-           CGTGAGCCTGGACACCAAAGTCGTGACGGCGACCATCACCGGAACCATGTACGACGAGGA
rJMFF050J06+          CGTGAGCCTGGACACCAAAGTCGTGACGGCGACCATCACCGGAACCATGTACGACGAGGA
                      ____________________________________________________________
consensus             CGTGAGCCTGGACACCAAAGTCGTGACGGCGACCATCACCGGAACCATGTACGACGAGGA
 
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JMFN016I04-           GCCGCTCGCGCTGTTCAAATTGGACAAGGTTTTGCAGCCGAGACAGCTTTTCAAGGCGGC
rJMFF050J06+          GCCGCTCGCGCTGTTCAAATTGGACAAGGTTTTGCAGCCGAGACAGCTTTTCAAGGCGGC
rJMFF044C10+                               GGACAAGGTTTTGCAGCCGAGACAGCTTTTCAAGGCGGC
                      ____________________________________________________________
consensus             GCCGCTCGCGCTGTTCAAATTGGACAAGGTTTTGCAGCCGAGACAGCTTTTCAAGGCGGC
 
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JMFN016I04-           GGCGGCGGAGGCGCCGGACGAAGCTCCGGCGCCCAAGGGCGCCAAGAAGAAGAAGAAGAG
rJMFF050J06+          GGCGGCGGAGGCGCCGGACGAAGCTCCGGCGCCCAAGGGCGCCAAGAAGAAGAAGAAGAG
rJMFF044C10+          GGCGGCGGAGGCGCCGATCGAAGCTCCGGCGCCCAAGGGCGCCAAGAAGAAGAAGAAGAG
                      ____________________________________________________________
consensus             GGCGGCGGAGGCGCCGGACGAAGCTCCGGCGCCCAAGGGCGCCAAGAAGAAGAAGAAGAG
 
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JMFN016I04-           CAAAAGCGGCGCCGTGGACGACGGAGACGATGGAGACGCGCCGGAGCCAAGCAGCGACGA
rJMFF050J06+          CAAAAGCGGCGCCGTGGACGACGGAGACGATGGAGACGCGCCGGAGCCAAGCAGCGACGA
rJMFF044C10+          GAAAAGCGGCGCCGTGGACGACGGAGACGATGGAGACGCGCCGGAGCCAAGCAGCGACGA
                      ____________________________________________________________
consensus             CAAAAGCGGCGCCGTGGACGACGGAGACGATGGAGACGCGCCGGAGCCAAGCAGCGACGA
 
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JMFN016I04-           CGATGAGCCGGCGGATGATACCGCCAGTGACAAGAATGGGGGCTCGGTGGTGATTGTCGG
rJMFF050J06+          CGATGAGCCGGCGGATGATACCGCCAGTGACAAGAATGGGGGCTCGGTGGTGATTGTCGG
rJMFF032E15+                                               GGGGGNTCGGNGGNGATTGTCGG
rJMFF044C10+          CGATGAGCCGGCGGATGATACCGCCAGTGACAAGAATGGGGGCTCGGTGGTGATTGTCGG
                      ____________________________________________________________
consensus             CGATGAGCCGGCGGATGATACCGCCAGTGACAAGAATGGGGGCTCGGTGGTGATTGTCGG
 
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JMFN016I04-           TGGATGGGTTCTGAGGGTATTTTTGGCATTGTGTGTGGGTAGTTTTGTCATAATTTCTTG
rJMFF050J06+          TGGATGGGTTCTGAGGGTATTTTTGGCATTGTGTGTGGGTAGTTTTGTCATAATTTCTTG
rJMFF032E15+          NGGANGGGTTTTGAGGGTATTTTTGGCNTTGNGNGNGGGTAGTTTTGTCATAANTTTTTG
rJMFF044C10+          TGGATGGGTTCTGAGGGTATTTTTGGCATTGTGTGTGGGTAGTTTTGTCATAATTTCTTG
                      ____________________________________________________________
consensus             TGGATGGGTTCTGAGGGTATTTTTGGCATTGTGTGTGGGTAGTTTTGTCATAATTTCTTG
 
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JMFN016I04-           AGGGACCATTATTATGTCAATTATTATATTGCTAT                         
rJMFF050J06+          AGGGACCATTATTATGTCAATTATTATATTGCTATAAACATGTGAGTTATCATC      
rJMFF032E15+          NGGGNCCNTTNTTATGTCAATTATTATATTGNTATAAACATG                  
rJMFF044C10+          AGGGACCATTATTATGTCAATTATTATATTGCTATAAACATGTGAGTTATCATCTGCATC
                      ____________________________________________________________
consensus             AGGGACCATTATTATGTCAATTATTATATTGCTATAAACATGTGAGTTATCATCTGCATC
 
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rJMFF044C10+          ATGACACCTAGCTTCCTAAATATTGCATATAGAAAATTATTATTTTGGGTCCCACAAAAA
                      ____________________________________________________________
consensus             ATGACACCTAGCTTCCTAAATATTGCATATAGAAAATTATTATTTTGGGTCCCACAAAAA
 
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rJMFF044C10+          AAGACAGATCAAATAATGATTTGATTTTCGTTTGGAGTTTTTCATAGTTTGAATGTAATT
                      ____________________________________________________________
consensus             AAGACAGATCAAATAATGATTTGATTTTCGTTTGGAGTTTTTCATAGTTTGAATGTAATT
 
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rJMFF044C10+          TTTTTTTTTTTTTGGGTTGAACAATAATTGCATCTTTCTTTCTTTTTTCCTTTTGTAATT
                      ____________________________________________________________
consensus             TTTTTTTTTTTTTGGGTTGAACAATAATTGCATCTTTCTTTCTTTTTTCCTTTTGTAATT
 
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rJMFF044C10+          ATTACTTTTTTATGCTACATAAAGTCGTGGTGAGTTGTGGTCAGTGATGGTACAACATTT
                      ____________________________________________________________
consensus             ATTACTTTTTTATGCTACATAAAGTCGTGGTGAGTTGTGGTCAGTGATGGTACAACATTT
 
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rJMFF044C10+          CTCCATGTTGTAAATTGTCATATTTAATACCTTCAAAATAAATATTAAATGTAAAAAAAA
                      ____________________________________________________________
consensus             CTCCATGTTGTAAATTGTCATATTTAATACCTTCAAAATAAATATTAAATGTAAAAAAAA