Contig 013812:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032E15Sequence571006071 (8)ref|XP_009799147.1|4e-73PREDICTED: fasciclin-like arabinogalactan protein 2 [Nicotiana sylvestris]130013812 (4)
JMFF044C10Sequence654006071 (8)ref|XP_009799147.1|3e-76PREDICTED: fasciclin-like arabinogalactan protein 2 [Nicotiana sylvestris]639013812 (4)
JMFF050J06Sequence632006071 (8)ref|XP_009799147.1|2e-76PREDICTED: fasciclin-like arabinogalactan protein 2 [Nicotiana sylvestris]528013812 (4)gb|EPS69372.1|4e-29fasciclin-like arabinogalactan protein 19, partial [Genlisea aurea]
JMFN016I04Sequence455013812 (4)emb|CDP18905.1|3e-19unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF050J06+ TCCCGATTTACCACTCCCTCGCGATGCTGAAATCCAGCAACGGCCTAGTGAA
                      ____________________________________________________________
consensus TCCCGATTTACCACTCCCTCGCGATGCTGAAATCCAGCAACGGCCTAGTGAA
 
. : . : . : . : . : . :
JMFN016I04- CACCCTCGCGACGGAGGGATCCAACAAGTACGACATCACCGTCAAAAACGACGGCGAAAC
rJMFF050J06+ CACCCTCGCGACGGAGGGATCCAACAAGTACGACATCACCGTCAAAAACGACGGCGAAAC
                      ____________________________________________________________
consensus CACCCTCGCGACGGAGGGATCCAACAAGTACGACATCACCGTCAAAAACGACGGCGAAAC
 
. : . : . : . : . : . :
JMFN016I04- CGTGAGCCTGGACACCAAAGTCGTGACGGCGACCATCACCGGAACCATGTACGACGAGGA
rJMFF050J06+ CGTGAGCCTGGACACCAAAGTCGTGACGGCGACCATCACCGGAACCATGTACGACGAGGA
                      ____________________________________________________________
consensus CGTGAGCCTGGACACCAAAGTCGTGACGGCGACCATCACCGGAACCATGTACGACGAGGA
 
. : . : . : . : . : . :
JMFN016I04- GCCGCTCGCGCTGTTCAAATTGGACAAGGTTTTGCAGCCGAGACAGCTTTTCAAGGCGGC
rJMFF050J06+ GCCGCTCGCGCTGTTCAAATTGGACAAGGTTTTGCAGCCGAGACAGCTTTTCAAGGCGGC
rJMFF044C10+ GGACAAGGTTTTGCAGCCGAGACAGCTTTTCAAGGCGGC
                      ____________________________________________________________
consensus GCCGCTCGCGCTGTTCAAATTGGACAAGGTTTTGCAGCCGAGACAGCTTTTCAAGGCGGC
 
. : . : . : . : . : . :
JMFN016I04- GGCGGCGGAGGCGCCGGACGAAGCTCCGGCGCCCAAGGGCGCCAAGAAGAAGAAGAAGAG
rJMFF050J06+ GGCGGCGGAGGCGCCGGACGAAGCTCCGGCGCCCAAGGGCGCCAAGAAGAAGAAGAAGAG
rJMFF044C10+ GGCGGCGGAGGCGCCGATCGAAGCTCCGGCGCCCAAGGGCGCCAAGAAGAAGAAGAAGAG
                      ____________________________________________________________
consensus GGCGGCGGAGGCGCCGGACGAAGCTCCGGCGCCCAAGGGCGCCAAGAAGAAGAAGAAGAG
 
. : . : . : . : . : . :
JMFN016I04- CAAAAGCGGCGCCGTGGACGACGGAGACGATGGAGACGCGCCGGAGCCAAGCAGCGACGA
rJMFF050J06+ CAAAAGCGGCGCCGTGGACGACGGAGACGATGGAGACGCGCCGGAGCCAAGCAGCGACGA
rJMFF044C10+ GAAAAGCGGCGCCGTGGACGACGGAGACGATGGAGACGCGCCGGAGCCAAGCAGCGACGA
                      ____________________________________________________________
consensus CAAAAGCGGCGCCGTGGACGACGGAGACGATGGAGACGCGCCGGAGCCAAGCAGCGACGA
 
. : . : . : . : . : . :
JMFN016I04- CGATGAGCCGGCGGATGATACCGCCAGTGACAAGAATGGGGGCTCGGTGGTGATTGTCGG
rJMFF050J06+ CGATGAGCCGGCGGATGATACCGCCAGTGACAAGAATGGGGGCTCGGTGGTGATTGTCGG
rJMFF032E15+ GGGGGNTCGGNGGNGATTGTCGG
rJMFF044C10+ CGATGAGCCGGCGGATGATACCGCCAGTGACAAGAATGGGGGCTCGGTGGTGATTGTCGG
                      ____________________________________________________________
consensus CGATGAGCCGGCGGATGATACCGCCAGTGACAAGAATGGGGGCTCGGTGGTGATTGTCGG
 
. : . : . : . : . : . :
JMFN016I04- TGGATGGGTTCTGAGGGTATTTTTGGCATTGTGTGTGGGTAGTTTTGTCATAATTTCTTG
rJMFF050J06+ TGGATGGGTTCTGAGGGTATTTTTGGCATTGTGTGTGGGTAGTTTTGTCATAATTTCTTG
rJMFF032E15+ NGGANGGGTTTTGAGGGTATTTTTGGCNTTGNGNGNGGGTAGTTTTGTCATAANTTTTTG
rJMFF044C10+ TGGATGGGTTCTGAGGGTATTTTTGGCATTGTGTGTGGGTAGTTTTGTCATAATTTCTTG
                      ____________________________________________________________
consensus TGGATGGGTTCTGAGGGTATTTTTGGCATTGTGTGTGGGTAGTTTTGTCATAATTTCTTG
 
. : . : . : . : . : . :
JMFN016I04- AGGGACCATTATTATGTCAATTATTATATTGCTAT
rJMFF050J06+ AGGGACCATTATTATGTCAATTATTATATTGCTATAAACATGTGAGTTATCATC
rJMFF032E15+ NGGGNCCNTTNTTATGTCAATTATTATATTGNTATAAACATG
rJMFF044C10+ AGGGACCATTATTATGTCAATTATTATATTGCTATAAACATGTGAGTTATCATCTGCATC
                      ____________________________________________________________
consensus AGGGACCATTATTATGTCAATTATTATATTGCTATAAACATGTGAGTTATCATCTGCATC
 
. : . : . : . : . : . :
rJMFF044C10+ ATGACACCTAGCTTCCTAAATATTGCATATAGAAAATTATTATTTTGGGTCCCACAAAAA
                      ____________________________________________________________
consensus ATGACACCTAGCTTCCTAAATATTGCATATAGAAAATTATTATTTTGGGTCCCACAAAAA
 
. : . : . : . : . : . :
rJMFF044C10+ AAGACAGATCAAATAATGATTTGATTTTCGTTTGGAGTTTTTCATAGTTTGAATGTAATT
                      ____________________________________________________________
consensus AAGACAGATCAAATAATGATTTGATTTTCGTTTGGAGTTTTTCATAGTTTGAATGTAATT
 
. : . : . : . : . : . :
rJMFF044C10+ TTTTTTTTTTTTTGGGTTGAACAATAATTGCATCTTTCTTTCTTTTTTCCTTTTGTAATT
                      ____________________________________________________________
consensus TTTTTTTTTTTTTGGGTTGAACAATAATTGCATCTTTCTTTCTTTTTTCCTTTTGTAATT
 
. : . : . : . : . : . :
rJMFF044C10+ ATTACTTTTTTATGCTACATAAAGTCGTGGTGAGTTGTGGTCAGTGATGGTACAACATTT
                      ____________________________________________________________
consensus ATTACTTTTTTATGCTACATAAAGTCGTGGTGAGTTGTGGTCAGTGATGGTACAACATTT
 
. : . : . : . : . : . :
rJMFF044C10+ CTCCATGTTGTAAATTGTCATATTTAATACCTTCAAAATAAATATTAAATGTAAAAAAAA
                      ____________________________________________________________
consensus CTCCATGTTGTAAATTGTCATATTTAATACCTTCAAAATAAATATTAAATGTAAAAAAAA