Contig 013808:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043L11Sequence638013808 (2)498013808 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF043L11- TGAGAACCAACCTCACAACACCATTATTTTT
                      ____________________________________________________________
consensus TGAGAACCAACCTCACAACACCATTATTTTT
 
. : . : . : . : . : . :
JMFF043L11- CATCTCTCATTCTTTAATTCTTTTCTTTGTCTCAAAACTCTTCCTCTCTCGATCTCACTC
                      ____________________________________________________________
consensus CATCTCTCATTCTTTAATTCTTTTCTTTGTCTCAAAACTCTTCCTCTCTCGATCTCACTC
 
. : . : . : . : . : . :
JMFF043L11- TAGGCTCTAGGCTGAGAGAGAGAGAGATCGAGAGAGAGAGAGAAAGCAATTAAGAAGCAA
                      ____________________________________________________________
consensus TAGGCTCTAGGCTGAGAGAGAGAGAGATCGAGAGAGAGAGAGAAAGCAATTAAGAAGCAA
 
. : . : . : . : . : . :
JMFF043L11- CCAATTCAATATAATTATGGGTTGTGGGGAATCAAAGCATGCCACTGTAACAGCTAACAC
                      ____________________________________________________________
consensus CCAATTCAATATAATTATGGGTTGTGGGGAATCAAAGCATGCCACTGTAACAGCTAACAC
 
. : . : . : . : . : . :
JMFF043L11- TGCCATTACCAAGAGATCTTCCTCTTCAAGAACCAATTCCCAGAAGGAGAGACCCCCATT
                      ____________________________________________________________
consensus TGCCATTACCAAGAGATCTTCCTCTTCAAGAACCAATTCCCAGAAGGAGAGACCCCCATT
 
. : . : . : . : . : . :
JMFF043L11- GGATCAACAACCAGAAACACCTGCAAATAATGATGCCACCAAGAACCCACCTCAATCTGC
                      ____________________________________________________________
consensus GGATCAACAACCAGAAACACCTGCAAATAATGATGCCACCAAGAACCCACCTCAATCTGC
 
. : . : . : . : . : . :
JMFF043L11- TCCTCAAAAGGGTGACAATAATATTATTCATATTATAAAGGAGAGCAAAGGCGGAGACGA
rJMFF043L11+ GAGCAAAGGCGGAGACGA
                      ____________________________________________________________
consensus TCCTCAAAAGGGTGACAATAATATTATTCATATTATAAAGGAGAGCAAAGGCGGAGACGA
 
. : . : . : . : . : . :
JMFF043L11- AAAGGCCCTCGAGGCGAAGGAAAGCAAGAATGGTGCAAAGGAGACAATAATTGATAAAAC
rJMFF043L11+ AAAGGCCCTCGAGGCGAAGGAAAGCAAGAATGGTGCAAAGGAGACAATAATTGATAAAAC
                      ____________________________________________________________
consensus AAAGGCCCTCGAGGCGAAGGAAAGCAAGAATGGTGCAAAGGAGACAATAATTGATAAAAC
 
. : . : . : . : . : . :
JMFF043L11- AGCCAAAGTGGAAGAAAAGGAAAATGGAGCACAGGCCGGCAAGGAAGGATCTCTTGAACA
rJMFF043L11+ AGCCAAAGTGGAAGAAAAGGAAAATGGAGCCCAGGCCGGCAAGGAAGGATTTTTTGAACA
                      ____________________________________________________________
consensus AGCCAAAGTGGAAGAAAAGGAAAATGGAGCCCAGGCCGGCAAGGAAGGATTTTTTGAACA
 
. : . : . : . : . : . :
JMFF043L11- AAATGAAGATGTTAATACAAATGAAGAATACAGCTGCTTCTGAGGGCAAAACAGAAATCA
rJMFF043L11+ AAATGAAGATGTTAATTCAAATGAAGAATACAGCTGCTTTTGAGGCAAAAACAGAAATCA
                      ____________________________________________________________
consensus AAATGAAGATGTTAATTCAAATGAAGAATACAGCTGCTTTTGAGGGCAAAACAGAAATCA
 
. : . : . : . : . : . :
JMFF043L11- NACCACAACCATAAGAGAAGATTGGAAAACCAATCTGATACTAAATCAGATGCTCATTTC
rJMFF043L11+ AACCCCAACCATAAGAGAAGATTGAAAAACCAATTTGATACTAAATCAGATGCTCATTTC
                      ____________________________________________________________
consensus AACCCCAACCATAAGAGAAGATTGGAAAACCAATTTGATACTAAATCAGATGCTCATTTC
 
. : . : . : . : . : . :
JMFF043L11- ATCTGTA
rJMFF043L11+ ATCTGTATGAGAAATCATTTTTATTTATTTCCCATTATGGGTAATTTTAATGCCCCATTT
                      ____________________________________________________________
consensus ATCTGTATGAGAAATCATTTTTATTTATTTCCCATTATGGGTAATTTTAATGCCCCATTT
 
. : . : . : . : . : . :
rJMFF043L11+ TTTTTTCCATCAAATATACAAAACATGTAAAAGTGGAGAGTATATATCATATATTCATTT
                      ____________________________________________________________
consensus TTTTTTCCATCAAATATACAAAACATGTAAAAGTGGAGAGTATATATCATATATTCATTT
 
. : . : . : . : . : . :
rJMFF043L11+ TGTTGTGGAGGATAGAAGCATTGCATGGGCTTTTTAGTATCAAGTTTTCATACTAATTTG
                      ____________________________________________________________
consensus TGTTGTGGAGGATAGAAGCATTGCATGGGCTTTTTAGTATCAAGTTTTCATACTAATTTG
 
. : . : . : . : . : . :
rJMFF043L11+ GTTCGTGAAAAAAAAAAAATXXXXXXXXXXXXXXXXXXXXTAAAAAAAAAAAAAAAACAC
                      ____________________________________________________________
consensus GTTCGTGAAAAAAAAAAAATNNNNNNNNNNNNNNNNNNNNTAAAAAAAAAAAAAAAACAC