Contig 013807:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016F02Sequence615006361 (9)ref|XP_009783853.1|4e-46PREDICTED: uncharacterized protein LOC104232363 isoform X2 [Nicotiana sylvestri720013807 (8)emb|CDO98250.1|3e-39unnamed protein product [Coffea canephora]
JMFF030I17Sequence536006361 (9)ref|XP_009783853.1|2e-26PREDICTED: uncharacterized protein LOC104232363 isoform X2 [Nicotiana sylvestri719013807 (8)emb|CDO98250.1|3e-39unnamed protein product [Coffea canephora]
JMFF043G20Sequence635006361 (9)ref|XP_009783853.1|7e-52PREDICTED: uncharacterized protein LOC104232363 isoform X2 [Nicotiana sylvestri559013807 (8)emb|CDP19452.1|2e-10unnamed protein product [Coffea canephora]
JMSF012N24Sequence252006361 (9)776013807 (8)emb|CDO98250.1|7e-46unnamed protein product [Coffea canephora]
JMSF036C12Sequence656006361 (9)ref|XP_009783853.1|1e-56PREDICTED: uncharacterized protein LOC104232363 isoform X2 [Nicotiana sylvestri763013807 (8)emb|CDO98250.1|2e-44unnamed protein product [Coffea canephora]
JMSF037G19Sequence655006361 (9)ref|XP_009783853.1|4e-56PREDICTED: uncharacterized protein LOC104232363 isoform X2 [Nicotiana sylvestri715013807 (8)emb|CDO98250.1|2e-40unnamed protein product [Coffea canephora]
JMSF048O14Sequence656006361 (9)ref|XP_009783853.1|1e-56PREDICTED: uncharacterized protein LOC104232363 isoform X2 [Nicotiana sylvestri755013807 (8)emb|CDO98250.1|1e-46unnamed protein product [Coffea canephora]
JMSF050K19Sequence749013807 (8)emb|CDO98250.1|6e-70unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF012N24+ GGCGTGAAACATCATCA
                      ____________________________________________________________
consensus GGCGTGAAACATCATCA
 
. : . : . : . : . : . :
rJMSF050K19+ TCAGTGATGGACACGCGGGTAATTGAAGATATTAAAAGTATGGGAGTAGAAGA
rJMSF012N24+ CCNAGGTTCAGTGATGGACACGCGGGTAATTGAAGATATTAAAAGTATGGGAGTAGAAGA
                      ____________________________________________________________
consensus CCNAGGTTCAGTGATGGACACGCGGGTAATTGAAGATATTAAAAGTATGGGAGTAGAAGA
 
. : . : . : . : . : . :
rJMSF050K19+ ATGGAAGGGATTGAGTAACTGGGATCAGATCAGAGTCCCGGGGCTTCATCCTTCTATGTC
rJMSF012N24+ ATGGAAGGGATTGAGTAACTGGGATCAGATCAGAGTCCCGGGGCTTCATCCTTCTATGTC
                      ____________________________________________________________
consensus ATGGAAGGGATTGAGTAACTGGGATCAGATCAGAGTCCCGGGGCTTCATCCTTCTATGTC
 
. : . : . : . : . : . :
rJMSF050K19+ GATGGGTGATCTCGTGAGTCATCTTGAACAACGCATGTCGGAGCAAAAAACGTCCAAAGA
rJMSF012N24+ GATGGGTGATCTCGTGAGTCATCTTGAACAACGCATGTCGGAGCAAAAAACGTCCAAAGA
rJMFF030I17+ TTGAACAACGCATGTCGGAGCAAAAAACGTCCAAAGA
rJMSF037G19+ TTGAACAACGCATGTCGGAGCAAAAAACGTCCAAAGA
rJMFF016F02+ TTGAACAACGCATGTCGGAGCAAAAAACGTCCAAAGA
rJMSF048O14+ GGTGATCTCGTGAGTCATCTTGAACAACGCATGTCGGAGCAGAAAACGTCCAAAGA
rJMSF036C12+ GGTGATCTCGTGAGTCATCTTGAACAACGCATGTCGGAGCAAAAAACGTCCAAAGA
                      ____________________________________________________________
consensus GATGGGTGATCTCGTGAGTCATCTTGAACAACGCATGTCGGAGCAAAAAACGTCCAAAGA
 
. : . : . : . : . : . :
rJMSF050K19+ TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
rJMSF012N24+ TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
rJMFF030I17+ TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
rJMSF037G19+ TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
rJMFF016F02+ TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
rJMSF048O14+ TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
rJMSF036C12+ TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
                      ____________________________________________________________
consensus TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
 
. : . : . : . : . : . :
rJMSF050K19+ TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
rJMSF012N24+ TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
rJMFF030I17+ TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
rJMSF037G19+ TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
rJMFF016F02+ TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
rJMSF048O14+ TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
rJMSF036C12+ TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
                      ____________________________________________________________
consensus TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
 
. : . : . : . : . : . :
rJMSF050K19+ GGTCAATTCTCTCTGCTGCCTTCTTCAGGAAGACCCTCCTCCGCCCACCGCCCAAAGAAG
rJMSF012N24+ GGTCAATTCTCTCTGCTGCCTTCTTCAG-AAGACCCTCCTCCGCCCACCGCCCAAAGAAG
rJMFF030I17+ GGTCAATTCTCTCTGCTGCCTTCTTCAGAAAGACCCTCCTCCGCCCACCGCCCAAAGAAG
rJMSF037G19+ GGTCAATTCTCTCTGCTGCCTTCTTCAGAAAGACCCTCCTCCGCCCACCGCCCAAAGAAG
rJMFF016F02+ GGTCAATTCTCTCTGCTGCCTTCTTCAGAAAGACCCTCCTCCGCCCACCGCCCAAAGAAG
rJMSF048O14+ GGTCAATTCTCTCTGCTGCCTTCTTCAGAAAGACCCTCCTCCGCCCACCGCCCAAAGAAG
rJMSF036C12+ GGTCAATTCTCTCTGCTGCCTTCTTCAGAAAGACCCTCCTCCGCCCACCGCCCAAAGAAG
rJMFF043G20+ CCGCCCACCGCCCAAAGAAG
                      ____________________________________________________________
consensus GGTCAATTCTCTCTGCTGCCTTCTTCAGAAAGACCCTCCTCCGCCCACCGCCCAAAGAAG
 
. : . : . : . : . : . :
rJMSF050K19+ GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
rJMSF012N24+ GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
rJMFF030I17+ GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
rJMSF037G19+ GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
rJMFF016F02+ GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
rJMSF048O14+ GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
rJMSF036C12+ GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
rJMFF043G20+ GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
                      ____________________________________________________________
consensus GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
 
. : . : . : . : . : . :
rJMSF050K19+ TGCATCAGTAGTGAGTGAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
rJMSF012N24+ TGCATCAGTAGTGAGTGAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
rJMFF030I17+ TGCATCAGTAGTGAGTTAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
rJMSF037G19+ TGCATCAGTAGTGAGTGAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
rJMFF016F02+ TGCATCAGTAGTGAGTTAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
rJMSF048O14+ TGCATCAGTAGTGAGTGAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
rJMSF036C12+ TGCATCAGTAGTGAGTGAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
rJMFF043G20+ TGCATCAGTAGTGAGTTAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
                      ____________________________________________________________
consensus TGCATCAGTAGTGAGTGAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
 
. : . : . : . : . : . :
rJMSF050K19+ TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
rJMSF012N24+ TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
rJMFF030I17+ TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
rJMSF037G19+ TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
rJMFF016F02+ TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
rJMSF048O14+ TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
rJMSF036C12+ TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
rJMFF043G20+ TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
                      ____________________________________________________________
consensus TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
 
. : . : . : . : . : . :
rJMSF050K19+ GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
rJMSF012N24+ GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
rJMFF030I17+ GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
rJMSF037G19+ GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
rJMFF016F02+ GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
rJMSF048O14+ GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
rJMSF036C12+ GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
rJMFF043G20+ GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
                      ____________________________________________________________
consensus GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
 
. : . : . : . : . : . :
rJMSF050K19+ TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
rJMSF012N24+ TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
rJMFF030I17+ TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
rJMSF037G19+ TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
rJMFF016F02+ TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
rJMSF048O14+ TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
rJMSF036C12+ TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
rJMFF043G20+ TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
                      ____________________________________________________________
consensus TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
 
. : . : . : . : . : . :
rJMSF050K19+ CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCAGCTGTAAATATAGCCAACTTCTT
rJMSF012N24+ CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
rJMFF030I17+ CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
rJMSF037G19+ CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
rJMFF016F02+ CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
rJMSF048O14+ CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
rJMSF036C12+ CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
rJMFF043G20+ CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
                      ____________________________________________________________
consensus CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
 
. : . : . : . : . : . :
rJMSF050K19+ ATAGATGTGTAC
rJMSF012N24+ ATAGATGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATT
rJMFF030I17+ ATAGATGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATTTGGTGTTTGGTTTCTTATG
rJMSF037G19+ ATAGATGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATTTGGTGTTTGGTTTCTTATG
rJMFF016F02+ ATAGATGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATTTGGTGTTTGGTTTCTTATG
rJMSF048O14+ ATAGATGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATTTGGTGTTTGGTTTCTTATG
rJMSF036C12+ ATAGGTGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATTTGGTGTTTGGTTTCTTATG
rJMFF043G20+ ATAGATGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATTTGGTGTTTGGTTTCTTATG
                      ____________________________________________________________
consensus ATAGATGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATTTGGTGTTTGGTTTCTTATG
 
. : . : . : . : . : . :
rJMFF030I17+ TGCAGATAAGATGTTTTCTTTCATCATCCCCTCCTATTTTATATTGTTGTTGTATCAAAA
rJMSF037G19+ TGCAGATAAGATGTTTTCTTTCATCATCCCCTCCTATTTTATATTGTTGTTGTATCAAAA
rJMFF016F02+ TGCAGATAAGATGTTTTCTTTCATCATCCCCTCCTATTTTATATTGTTGTTGTATCAAAA
rJMSF048O14+ TGCAGATAAGATGTTTTCTTTCATCATCCCCTCCTATTTTATATTGTTGTTGTATCAAAA
rJMSF036C12+ TGCAGATAAGATGTTTTCTTTCATCATCCCCTCCTATTTTATATTGTTGTTGTATCAAAA
rJMFF043G20+ TGCAGATAAGATGTTTTCTTTCATCATCCCCTCCTATTTTATATTGTTGTTGTATCAAAA
                      ____________________________________________________________
consensus TGCAGATAAGATGTTTTCTTTCATCATCCCCTCCTATTTTATATTGTTGTTGTATCAAAA
 
. : . : . : . : . : . :
rJMFF030I17+ TCCTAAAAAACATGATATTTGTG
rJMSF037G19+ TCCTAAAAAACATGATATT
rJMFF016F02+ TCCTAAAAAACATGATATTTGTGG
rJMSF048O14+ TCCTAAAAAACATGATATTTGTGG
rJMSF036C12+ TCCTAAAAAACATGATATTTGTGGTTGAATGTGTATT
rJMFF043G20+ TCCTAAAAAACATGATATTTGTGGTTGAATGTGTATTTGCAAGTGAACTGCTGTATGTAG
                      ____________________________________________________________
consensus TCCTAAAAAACATGATATTTGTGGTTGAATGTGTATTTGCAAGTGAACTGCTGTATGTAG