Contig 013807:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016F02Sequence615006361 (9)ref|XP_009783853.1|4e-46PREDICTED: uncharacterized protein LOC104232363 isoform X2 [Nicotiana sylvestri720013807 (8)emb|CDO98250.1|3e-39unnamed protein product [Coffea canephora]
JMFF030I17Sequence536006361 (9)ref|XP_009783853.1|2e-26PREDICTED: uncharacterized protein LOC104232363 isoform X2 [Nicotiana sylvestri719013807 (8)emb|CDO98250.1|3e-39unnamed protein product [Coffea canephora]
JMFF043G20Sequence635006361 (9)ref|XP_009783853.1|7e-52PREDICTED: uncharacterized protein LOC104232363 isoform X2 [Nicotiana sylvestri559013807 (8)emb|CDP19452.1|2e-10unnamed protein product [Coffea canephora]
JMSF012N24Sequence252006361 (9)776013807 (8)emb|CDO98250.1|7e-46unnamed protein product [Coffea canephora]
JMSF036C12Sequence656006361 (9)ref|XP_009783853.1|1e-56PREDICTED: uncharacterized protein LOC104232363 isoform X2 [Nicotiana sylvestri763013807 (8)emb|CDO98250.1|2e-44unnamed protein product [Coffea canephora]
JMSF037G19Sequence655006361 (9)ref|XP_009783853.1|4e-56PREDICTED: uncharacterized protein LOC104232363 isoform X2 [Nicotiana sylvestri715013807 (8)emb|CDO98250.1|2e-40unnamed protein product [Coffea canephora]
JMSF048O14Sequence656006361 (9)ref|XP_009783853.1|1e-56PREDICTED: uncharacterized protein LOC104232363 isoform X2 [Nicotiana sylvestri755013807 (8)emb|CDO98250.1|1e-46unnamed protein product [Coffea canephora]
JMSF050K19Sequence749013807 (8)emb|CDO98250.1|6e-70unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF012N24+                                                     GGCGTGAAACATCATCA
                      ____________________________________________________________
consensus                                                        GGCGTGAAACATCATCA
 
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rJMSF050K19+                 TCAGTGATGGACACGCGGGTAATTGAAGATATTAAAAGTATGGGAGTAGAAGA
rJMSF012N24+          CCNAGGTTCAGTGATGGACACGCGGGTAATTGAAGATATTAAAAGTATGGGAGTAGAAGA
                      ____________________________________________________________
consensus             CCNAGGTTCAGTGATGGACACGCGGGTAATTGAAGATATTAAAAGTATGGGAGTAGAAGA
 
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rJMSF050K19+          ATGGAAGGGATTGAGTAACTGGGATCAGATCAGAGTCCCGGGGCTTCATCCTTCTATGTC
rJMSF012N24+          ATGGAAGGGATTGAGTAACTGGGATCAGATCAGAGTCCCGGGGCTTCATCCTTCTATGTC
                      ____________________________________________________________
consensus             ATGGAAGGGATTGAGTAACTGGGATCAGATCAGAGTCCCGGGGCTTCATCCTTCTATGTC
 
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rJMSF050K19+          GATGGGTGATCTCGTGAGTCATCTTGAACAACGCATGTCGGAGCAAAAAACGTCCAAAGA
rJMSF012N24+          GATGGGTGATCTCGTGAGTCATCTTGAACAACGCATGTCGGAGCAAAAAACGTCCAAAGA
rJMFF030I17+                                 TTGAACAACGCATGTCGGAGCAAAAAACGTCCAAAGA
rJMSF037G19+                                 TTGAACAACGCATGTCGGAGCAAAAAACGTCCAAAGA
rJMFF016F02+                                 TTGAACAACGCATGTCGGAGCAAAAAACGTCCAAAGA
rJMSF048O14+              GGTGATCTCGTGAGTCATCTTGAACAACGCATGTCGGAGCAGAAAACGTCCAAAGA
rJMSF036C12+              GGTGATCTCGTGAGTCATCTTGAACAACGCATGTCGGAGCAAAAAACGTCCAAAGA
                      ____________________________________________________________
consensus             GATGGGTGATCTCGTGAGTCATCTTGAACAACGCATGTCGGAGCAAAAAACGTCCAAAGA
 
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rJMSF050K19+          TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
rJMSF012N24+          TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
rJMFF030I17+          TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
rJMSF037G19+          TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
rJMFF016F02+          TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
rJMSF048O14+          TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
rJMSF036C12+          TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
                      ____________________________________________________________
consensus             TTTCAACCTCTCTAGCGAGGAACGACAAAGTTTAGAAATGCTTGAAGAGATAAACCGTTG
 
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rJMSF050K19+          TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
rJMSF012N24+          TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
rJMFF030I17+          TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
rJMSF037G19+          TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
rJMFF016F02+          TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
rJMSF048O14+          TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
rJMSF036C12+          TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
                      ____________________________________________________________
consensus             TTTGTTTAGCGACACTCAGTATATGCCTGCAGCCTCGGATGAAAAGTCTCTCATGTCCCG
 
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rJMSF050K19+          GGTCAATTCTCTCTGCTGCCTTCTTCAGGAAGACCCTCCTCCGCCCACCGCCCAAAGAAG
rJMSF012N24+          GGTCAATTCTCTCTGCTGCCTTCTTCAG-AAGACCCTCCTCCGCCCACCGCCCAAAGAAG
rJMFF030I17+          GGTCAATTCTCTCTGCTGCCTTCTTCAGAAAGACCCTCCTCCGCCCACCGCCCAAAGAAG
rJMSF037G19+          GGTCAATTCTCTCTGCTGCCTTCTTCAGAAAGACCCTCCTCCGCCCACCGCCCAAAGAAG
rJMFF016F02+          GGTCAATTCTCTCTGCTGCCTTCTTCAGAAAGACCCTCCTCCGCCCACCGCCCAAAGAAG
rJMSF048O14+          GGTCAATTCTCTCTGCTGCCTTCTTCAGAAAGACCCTCCTCCGCCCACCGCCCAAAGAAG
rJMSF036C12+          GGTCAATTCTCTCTGCTGCCTTCTTCAGAAAGACCCTCCTCCGCCCACCGCCCAAAGAAG
rJMFF043G20+                                                  CCGCCCACCGCCCAAAGAAG
                      ____________________________________________________________
consensus             GGTCAATTCTCTCTGCTGCCTTCTTCAGAAAGACCCTCCTCCGCCCACCGCCCAAAGAAG
 
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rJMSF050K19+          GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
rJMSF012N24+          GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
rJMFF030I17+          GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
rJMSF037G19+          GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
rJMFF016F02+          GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
rJMSF048O14+          GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
rJMSF036C12+          GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
rJMFF043G20+          GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
                      ____________________________________________________________
consensus             GGAGAATTTTCACGAGCCCGCAATGGGGGACAAGGGAGTCGGAGAGTTCAACTTCGCTTC
 
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rJMSF050K19+          TGCATCAGTAGTGAGTGAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
rJMSF012N24+          TGCATCAGTAGTGAGTGAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
rJMFF030I17+          TGCATCAGTAGTGAGTTAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
rJMSF037G19+          TGCATCAGTAGTGAGTGAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
rJMFF016F02+          TGCATCAGTAGTGAGTTAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
rJMSF048O14+          TGCATCAGTAGTGAGTGAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
rJMSF036C12+          TGCATCAGTAGTGAGTGAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
rJMFF043G20+          TGCATCAGTAGTGAGTTAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
                      ____________________________________________________________
consensus             TGCATCAGTAGTGAGTGAAAGGAATTACGAGGAAAATCGTCCTCCCACACCAGATGACGA
 
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rJMSF050K19+          TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
rJMSF012N24+          TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
rJMFF030I17+          TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
rJMSF037G19+          TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
rJMFF016F02+          TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
rJMSF048O14+          TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
rJMSF036C12+          TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
rJMFF043G20+          TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
                      ____________________________________________________________
consensus             TGGACTACCTGATGATCTCACATGCTCGAAGCAGAAAGCATCGATGTCAAGAAAGGACTC
 
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rJMSF050K19+          GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
rJMSF012N24+          GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
rJMFF030I17+          GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
rJMSF037G19+          GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
rJMFF016F02+          GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
rJMSF048O14+          GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
rJMSF036C12+          GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
rJMFF043G20+          GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
                      ____________________________________________________________
consensus             GGTTGGGGATCTATTGCTCAACCTTCCACGAATTACGTCGCTGCCTCAGTTTTTGTTCAA
 
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rJMSF050K19+          TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
rJMSF012N24+          TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
rJMFF030I17+          TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
rJMSF037G19+          TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
rJMFF016F02+          TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
rJMSF048O14+          TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
rJMSF036C12+          TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
rJMFF043G20+          TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
                      ____________________________________________________________
consensus             TATCGCCGAAGATTCTGATTATCATCAAGCTAGGTAGTGCGGTTTTAGGTTCTTCTTCAA
 
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rJMSF050K19+          CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCAGCTGTAAATATAGCCAACTTCTT
rJMSF012N24+          CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
rJMFF030I17+          CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
rJMSF037G19+          CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
rJMFF016F02+          CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
rJMSF048O14+          CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
rJMSF036C12+          CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
rJMFF043G20+          CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
                      ____________________________________________________________
consensus             CTCATCATCATCAGCAAAGGGATGGTGAGACCTCTCA-CTGTAAATATAGCCAACTTCTT
 
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rJMSF050K19+          ATAGATGTGTAC                                                
rJMSF012N24+          ATAGATGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATT                   
rJMFF030I17+          ATAGATGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATTTGGTGTTTGGTTTCTTATG
rJMSF037G19+          ATAGATGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATTTGGTGTTTGGTTTCTTATG
rJMFF016F02+          ATAGATGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATTTGGTGTTTGGTTTCTTATG
rJMSF048O14+          ATAGATGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATTTGGTGTTTGGTTTCTTATG
rJMSF036C12+          ATAGGTGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATTTGGTGTTTGGTTTCTTATG
rJMFF043G20+          ATAGATGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATTTGGTGTTTGGTTTCTTATG
                      ____________________________________________________________
consensus             ATAGATGTGTACTAATTTTGTTCAGTTTAGGAATTCAAATTTGGTGTTTGGTTTCTTATG
 
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rJMFF030I17+          TGCAGATAAGATGTTTTCTTTCATCATCCCCTCCTATTTTATATTGTTGTTGTATCAAAA
rJMSF037G19+          TGCAGATAAGATGTTTTCTTTCATCATCCCCTCCTATTTTATATTGTTGTTGTATCAAAA
rJMFF016F02+          TGCAGATAAGATGTTTTCTTTCATCATCCCCTCCTATTTTATATTGTTGTTGTATCAAAA
rJMSF048O14+          TGCAGATAAGATGTTTTCTTTCATCATCCCCTCCTATTTTATATTGTTGTTGTATCAAAA
rJMSF036C12+          TGCAGATAAGATGTTTTCTTTCATCATCCCCTCCTATTTTATATTGTTGTTGTATCAAAA
rJMFF043G20+          TGCAGATAAGATGTTTTCTTTCATCATCCCCTCCTATTTTATATTGTTGTTGTATCAAAA
                      ____________________________________________________________
consensus             TGCAGATAAGATGTTTTCTTTCATCATCCCCTCCTATTTTATATTGTTGTTGTATCAAAA
 
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rJMFF030I17+          TCCTAAAAAACATGATATTTGTG                                     
rJMSF037G19+          TCCTAAAAAACATGATATT                                         
rJMFF016F02+          TCCTAAAAAACATGATATTTGTGG                                    
rJMSF048O14+          TCCTAAAAAACATGATATTTGTGG                                    
rJMSF036C12+          TCCTAAAAAACATGATATTTGTGGTTGAATGTGTATT                       
rJMFF043G20+          TCCTAAAAAACATGATATTTGTGGTTGAATGTGTATTTGCAAGTGAACTGCTGTATGTAG
                      ____________________________________________________________
consensus             TCCTAAAAAACATGATATTTGTGGTTGAATGTGTATTTGCAAGTGAACTGCTGTATGTAG