| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF029N02 | Sequence | 575 | 010887 (7) | ref|XP_007050715.1| | 262 | Major facilitator superfamily protein isoform 1 [Theobroma cacao] ref|XP_0070507 | 768 | 013805 (8) | ref|XP_009614908.1| | 2e-108 | PREDICTED: sugar transporter ERD6-like 7 [Nicotiana tomentosiformis] |
| JMFF043E10 | Sequence | 638 | 010887 (7) | ref|XP_009614908.1| | 2e-82 | PREDICTED: sugar transporter ERD6-like 7 [Nicotiana tomentosiformis] | 614 | 013805 (8) | ref|XP_009614908.1| | 1e-67 | PREDICTED: sugar transporter ERD6-like 7 [Nicotiana tomentosiformis] |
| JMFF047J08 | Sequence | 581 | 010887 (7) | ref|XP_007050715.1| | 263 | Major facilitator superfamily protein isoform 1 [Theobroma cacao] ref|XP_0070507 | 585 | 013805 (8) | ref|XP_006358441.1| | 2e-62 | PREDICTED: sugar transporter ERD6-like 7-like [Solanum tuberosum] |
| JMFF051E12 | Sequence | 593 | 010887 (7) | dbj|BAO96226.1| | 2e-80 | sugar-porter family protein 7, partial [Solanum lycopersicum] | 578 | 013805 (8) | ref|XP_009614908.1| | 4e-59 | PREDICTED: sugar transporter ERD6-like 7 [Nicotiana tomentosiformis] |
| JMFN009E08 | Sequence | 631 | 013805 (8) | ref|XP_009614908.1| | 4e-88 | PREDICTED: sugar transporter ERD6-like 7 [Nicotiana tomentosiformis] | |||||
| JMSF025C15 | Sequence | 677 | 010887 (7) | ref|XP_007050715.1| | 297 | Major facilitator superfamily protein isoform 1 [Theobroma cacao] ref|XP_0070507 | 715 | 013805 (8) | ref|XP_009614908.1| | 1e-79 | PREDICTED: sugar transporter ERD6-like 7 [Nicotiana tomentosiformis] |
| JMSF038G12 | Sequence | 678 | 010887 (7) | ref|XP_007050715.1| | 164 | Major facilitator superfamily protein isoform 1 [Theobroma cacao] ref|XP_0070507 | 914 | 013805 (8) | ref|XP_009614908.1| | 8e-144 | PREDICTED: sugar transporter ERD6-like 7 [Nicotiana tomentosiformis] |
| JMSF045P04 | Sequence | 791 | 010887 (7) | ref|XP_007050715.1| | 301 | Major facilitator superfamily protein isoform 1 [Theobroma cacao] ref|XP_0070507 | 675 | 013805 (8) | ref|XP_009614908.1| | 6e-69 | PREDICTED: sugar transporter ERD6-like 7 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF038G12+ GCTGGCAAAGATTGGGCCACGGGAAAGAGTT
____________________________________________________________
consensus GCTGGCAAAGATTGGGCCACGGGAAAGAGTT
. : . : . : . : . : . :
rJMSF038G12+ TGAAGTTGCACTGCAAAAGCTTCGTGGGAAAAATGCAGATATATCAGAAGAGGCAGCTGA
____________________________________________________________
consensus TGAAGTTGCACTGCAAAAGCTTCGTGGGAAAAATGCAGATATATCAGAAGAGGCAGCTGA
. : . : . : . : . : . :
rJMSF038G12+ AATCCAGGATTATGTAGAAATGCTTGAAAAGCTCCCAAAGGCGAAACTATTCGATTTGTT
____________________________________________________________
consensus AATCCAGGATTATGTAGAAATGCTTGAAAAGCTCCCAAAGGCGAAACTATTCGATTTGTT
. : . : . : . : . : . :
rJMSF038G12+ TCAGAAAAGATACTCGCGTTCTATCTTTATTGGGGTTGGACTGATGATATGCCAGCAACT
rJMFF029N02+ TTATTGGGGTTGGACTGATGATATGCCAGCAACT
____________________________________________________________
consensus TCAGAAAAGATACTCGCGTTCTATCTTTATTGGGGTTGGACTGATGATATGCCAGCAACT
. : . : . : . : . : . :
rJMSF038G12+ TGGCGGAATTAATGGAATCTGTTTCTACACCAGCAGTATATTCGAGTCTGCAGGATTTCC
rJMFF029N02+ TGGCGGAATTAATGGAATCTGTTTCTACACCAGCAGTATATTCGAGTCTGCAGGATTTCC
____________________________________________________________
consensus TGGCGGAATTAATGGAATCTGTTTCTACACCAGCAGTATATTCGAGTCTGCAGGATTTCC
. : . : . : . : . : . :
rJMSF038G12+ TTCGGATATCGGGACTATAATCTATGCAATTCTTCAGGTTATAGTGACAGCAGTAGGGGC
JMFN009E08- GGTTATAGTGACAGCAGTAGGGGC
rJMSF025C15+ GGTTATAGTGACAGCAGTAGGGGC
rJMFF029N02+ TTCGGATATCGGGACTATAATCTATGCAATTCTTCAGGTTATAGTGACAGCAGTAGGGGC
____________________________________________________________
consensus TTCGGATATCGGGACTATAATCTATGCAATTCTTCAGGTTATAGTGACAGCAGTAGGGGC
. : . : . : . : . : . :
rJMSF038G12+ AACCTTAATAGACAAAGCTGGAAGAAAACCTCTTTTAGTGGTTTCTGCATCAGGACTTGC
JMFN009E08- AACCTTAATAGACAAAGCTGGAAGAAAACCTCTTTTAGTGGTTTCTGCATCAGGACTTGC
rJMSF025C15+ AACCTTAATAGACAAAGCTGGAAGAAAACCTCTTTTAGTGGTTTCTGCATCAGGACTTGC
rJMSF045P04+ GGTTTCTGCATCAGGACTTGC
rJMFF029N02+ AACCTTAATAGACAAAGCTGGAAGAAAACCTCTTTTAGTGGTTTCTGCATCAGGACTTGC
rJMFF051E12+ GCATCAGGACTGCT
rJMFF043E10+ GCATCAGGACTTGC
____________________________________________________________
consensus AACCTTAATAGACAAAGCTGGAAGAAAACCTCTTTTAGTGGTTTCTGCATCAGGACTTGC
. : . : . : . : . : . :
rJMSF038G12+ TCTCGGCTGTATATTAACAGGCGTCTCGTACTATCTTAAGGGACTTAACATTGCAGGCAA
JMFN009E08- TCTCGGCTGTATATTAACAGGCGTCTCGTACTATCTTAAGGGACTTAACATTGCAGGCAA
rJMSF025C15+ TCTCGGCTGTATATTAACAGGCGTCTCGTACTATCTTAAGGGACTTAACATTGCAGGCAA
rJMSF045P04+ TCTCGGCTGTATATTAACAGGCGTCTCGTACTATCTTAAGGGACTTAACATTGCAGGCAA
rJMFF029N02+ TCTCGGCTGTATATTAACAGGCGTCTCGTACTATCTTAAGGGACTTAACATTGCAGGCAA
rJMFF047J08+ TAACAGGCGTCTCGTACTATCTTAAGGGACTTAACATTGCAGGCAA
rJMFF051E12+ TCTCGGCTGTATATAAACAGGCGTCTCGTACTA-CTTAAGGGACTTAACATTGCAGGCAA
rJMFF043E10+ TCTCGGCTGTATATTAACAGGCGTCTCGTACTATCTTAAGGGACTTAACATTGCAGGCAA
____________________________________________________________
consensus TCTCGGCTGTATATTAACAGGCGTCTCGTACTATCTTAAGGGACTTAACATTGCAGGCAA
. : . : . : . : . : . :
rJMSF038G12+ TGCAGCACCTGTACTTGCTGTAACAGGCATAATGGTGTATATAGGGTCATTTTCAGTAGG
JMFN009E08- TGCAGCACCTGTACTTGCTGTAACAGGCATAATGGTGTATATAGGGTCATTTTCAGTAGG
rJMSF025C15+ TGCAGCACCTTTACTTGTTGTAACAGGCATAATGGTGTATATAGGGTCATTTTCAGTAGG
rJMSF045P04+ TGCAGCACCTGTACTTGCTGTAACAGGCATAATGGTGTATATAGGGTCATTTTCAGTAGG
rJMFF029N02+ TGCAGCACCTGTACTTGCTGTAACAGGCATAATGGTGTATATAGGGTCATTTTCAGTAGG
rJMFF047J08+ TGCAGCACCTGTACTTGCTGTAACAGGCATAATGGTGTATATAGGGTCATTTTCAGTAGG
rJMFF051E12+ TGCAGCACCTGTACTTGCTGTAACAGGCATAATGGTGTATATAGGGTCATTTTCAGTAGG
rJMFF043E10+ TGCAGCACCTGTACTTGCTGTAACAGGCATAATGGTGTATATAGGGTCATTTTCAGTAGG
____________________________________________________________
consensus TGCAGCACCTGTACTTGCTGTAACAGGCATAATGGTGTATATAGGGTCATTTTCAGTAGG
. : . : . : . : . : . :
rJMSF038G12+ AATGGGAGCAGTTCCATGGGTTATTATGTCCGAGATTTTCCCTATAAATGTCAAAGGGGT
JMFN009E08- AATGGGAGCAGTTCCATGGGTTATTATGTCCGAGATTTTCCCTATAAATGTCAAAGGGGT
rJMSF025C15+ AATGGGAGCAGTTCCATGGGTTATTATGTCCGAGATTTTCCCTATAAATGTCAAAGGGGT
rJMSF045P04+ AATGGGAGCAGTTCCATGGGTTATTATGTCCGAGATTTTCCCTATAAATGTCAAAGGGGT
rJMFF029N02+ AATGGGAGCAGTTCCATGGGTTATTATGTCCGAGATTTTCCCTATAAATGTCAAAGGGGT
rJMFF047J08+ AATGGGAGCAGTTCCATGGGTTATTATGTCCGAGATTTTCCCTATAAATGTCAAAGGGGT
rJMFF051E12+ AATGGGAGCAGTTCCATGGGTTATTATGTCCGAGATTTTCCCTATAAATGTCAAAGGGGT
rJMFF043E10+ AATGGGAGCAGTTCCATGGGTTATTATGTCCGAGATTTTCCCTATAAATGTCAAAGGGGT
____________________________________________________________
consensus AATGGGAGCAGTTCCATGGGTTATTATGTCCGAGATTTTCCCTATAAATGTCAAAGGGGT
. : . : . : . : . : . :
rJMSF038G12+ TGCAGGAAGCTTTGCAACACTAGTGAACTGGTTTGGGGCATGGTTATGTTCCTACACTTT
JMFN009E08- TGCAGGAAGCTTTGCAACACTAGTGAACTGGTTTGGGGCATGGTTATGTTCCTACACTTT
rJMSF025C15+ TGCAGGAAGCTTTGCAACACTAGTGAACTGGTTTGGGGCATGGTTATGTTCCTACACTTT
rJMSF045P04+ TGCAGGAAGCTTTGCAACACTAGTGAACTGGTTTGGGGCATGGTTATGTTCCTACACTTT
rJMFF029N02+ TGCAGGAAGCTTTGCAACACTAGTGAACTGGTTTGGGGCATGGTTATGTTCCTACACTTT
rJMFF047J08+ TGCAGGAAGCTTTGCAACACTAGTGAACTGGTTTGGGGCATGGTTATGTTCCTACACTTT
rJMFF051E12+ TGCAGGAAGCTTTGCAACACTAGTGAACTGGTTTGGGGCATGGTTATGTTCCTACACTTT
rJMFF043E10+ TGCAGGAAGCTTTGCAACACTAGTGAACTGGTTTGGGGCATGGTTATGTTCCTACACTTT
____________________________________________________________
consensus TGCAGGAAGCTTTGCAACACTAGTGAACTGGTTTGGGGCATGGTTATGTTCCTACACTTT
. : . : . : . : . : . :
rJMSF038G12+ CAATTTCCTCATGGCCTGGAACTCATTCGGCACTTTCATTCTCTACGCAACGATCAACGT
JMFN009E08- CAATTTCCTCATGGCCTGGAACTCATTCGGCACTTTCATTCTCTACGCAACGATCAACGT
rJMSF025C15+ CAATTTCCTCATGGCCTGGAACTCATTCGGCACTTTCATTCTCTACGCAACGATCAACGT
rJMSF045P04+ CAATTTCCTCATGGCCTGGAACTCATTCGGCACTTTCATTCTCTACGCAACGATCAACGT
rJMFF029N02+ CAATTTCCTCATGGCCTGGAACTCATTCGGCACTTTCATTCTCTACGCAACGATCAACGT
rJMFF047J08+ CAATTTCCTCATGGCCTGGAACTCATTCGGCACTTTCATTCTCTACGCAACGATCAACGT
rJMFF051E12+ CAATTTCCTCATGGCCTGGAACTCATTCGGCACTTTCATTCTCTACGCAACGATCAACGT
rJMFF043E10+ CAATTTCCTCATGGCCTGGAACTCATTCGGCACTTTCATTCTTTACGCAACGATCAACGT
____________________________________________________________
consensus CAATTTCCTCATGGCCTGGAACTCATTCGGCACTTTCATTCTCTACGCAACGATCAACGT
. : . : . : . : . : . :
rJMSF038G12+ GCTTGCGATCTTGTTTGTGATCAAGGTAGTGCCTGAAACCAAAGGGAGAACTTTGGAACA
JMFN009E08- GCTTGCGATCTTGTTTGTGATCAAGGTAGTGCCTGAAACCAAAGGGAGAACTTTGGAACA
rJMSF025C15+ GCTTGCGATCTTGTTTGTGATCAAGGTAGTGCCTGAAACCAAAGGGAGAACTTTGGAACA
rJMSF045P04+ GCTTGCGATCTTGTTTGTGATCAAGGTAGTGCCTGAAACCAAAGGGAGAACTTTGGAACA
rJMFF029N02+ GCTTGCGATCTTGTTTGTGATCAAGGTAGTGCCTGAAACCAAAGGGAGAACTTTGGAACA
rJMFF047J08+ GCTTGCGATCTTGTTTGTGATCAAGGTAGTGCCTGAAACCAAAGGGAGAACTTTGGAACA
rJMFF051E12+ GCTTGCGATCTTGTTTGTGATCAAGGTAGTGCCTGAAACCAAAGGGAGAACTTTGGAACA
rJMFF043E10+ GCTTGCGATCTTGTTTGTGATCAAGGTAGTGCCTGAAACCAAAGGGAGAACTTTGGAACA
____________________________________________________________
consensus GCTTGCGATCTTGTTTGTGATCAAGGTAGTGCCTGAAACCAAAGGGAGAACTTTGGAACA
. : . : . : . : . : . :
rJMSF038G12+ AATACAGGCTACCATCAATGCATAATCTCGTACCAGAAGACACAAAAATTCGAGGCAAGA
JMFN009E08- AATACAGGCTACCATCAATGCATAATCTCGTACCAGAAGACACAAAAATTCGAGGCAAGA
rJMSF025C15+ AATACAGGCTACCATCAATGCATAATCTCGTACCAGAAGACACAAAAATTCGAGGCAAGA
rJMSF045P04+ AATACAGGCTACCATCAATGCATAATCTCGTACCAGAAGACACAAAAATTCGAGGCAAGA
rJMFF029N02+ AATACAGGCTACCATCAATGCATAATCTCGTACCAGAAGACACAAAAATTCGAGGCAAGA
rJMFF047J08+ AATACAGGCTACCATCAATGCATAATCTCGTACCAGAAGACACAAAAATTCGAGGCAAGA
rJMFF051E12+ AATACAGGCTACCATCAATGCATAATCTCGTACCAGAAGACACAAAAATTCGAGGCAAGA
rJMFF043E10+ AATACAGGCTACCATCAATGCATAATCTCGTACCAGAAGACACAAAAATTCGAGGCAAGA
____________________________________________________________
consensus AATACAGGCTACCATCAATGCATAATCTCGTACCAGAAGACACAAAAATTCGAGGCAAGA
. : . : . : . : . : . :
rJMSF038G12+ TGGATGCTGTAGCAGGAGAAGTTTTTCGATATCGTTCTAGGCAGATCACAGGAAGTGTAA
JMFN009E08- TGGATGCTGTAGCAGGAGAAGTTTTTCGATATCGTTCTAGGCAGATCACAGGAAGTGTAA
rJMSF025C15+ TGGATGCTGTAGCAGGAGAAGTTTTTCGATATCGTTCTAGGCAGATCACAGGAAGTGTAA
rJMSF045P04+ TGGATGCTGTAGCAGGAGAAGTTTTTCGATATCGTTCTAGGCAGATCACAGGAAGTGTAA
rJMFF029N02+ TGGATGCTGTAGCAGGAGAAGTTTTTCGATATCGTTCTAGGCAGATCACAGGAAGTGTAA
rJMFF047J08+ TGGATGCTGTAGCAGGAGAAGTTTTTCGATATCGTTCTAGGCAGATCACAGGAAGTGTAA
rJMFF051E12+ TGGATGCTGTAGCAGGAGAAGTTTTTCGATATCGTTCTAGGCAGATCACAGGAAGTGTAA
rJMFF043E10+ TGGATGCTGTAGCAGGAGAAGTTTTTCGATATCGTTTTAGGCAGATCACAGGAAGTGTAA
____________________________________________________________
consensus TGGATGCTGTAGCAGGAGAAGTTTTTCGATATCGTTCTAGGCAGATCACAGGAAGTGTAA
. : . : . : . : . : . :
rJMSF038G12+ AATCATTTTATTTGTTGTATGTAACC
JMFN009E08- AATCATTTTATTTGTTGTATGTAACCATTTCTA
rJMSF025C15+ AATCATTTTATTTGTTGTATGTAACCATTTCTATTGT
rJMSF045P04+ AATCATTTTATTTGTTGTATGTAACCATTTCTA
rJMFF029N02+ AATCATTTTATTTGTTGTATGTAACCATTTCTATTGTTGCTGATGAACGACAGCACGAGA
rJMFF047J08+ AATCATTTTATTTGTTGTATGTAACCATTTCTATTGTTGCTGATGAACGACAGCACGAGA
rJMFF051E12+ AATCATTTTATTTGTTGTATGTAACCATTTCTATTGTTGCTGATGAACGACAGCACGAGA
rJMFF043E10+ AATCATTTTATTTGTTGTATGTAACCATTTCTATTGTTGCTGATGAACGACAGCACGAGA
____________________________________________________________
consensus AATCATTTTATTTGTTGTATGTAACCATTTCTATTGTTGCTGATGAACGACAGCACGAGA
. : . : . : . : . : . :
rJMFF029N02+ AATAACAGAGAATC
rJMFF047J08+ AATAACAGAGAATCTGTTAAGTTTCA
rJMFF051E12+ AATAACAGAGAATCTGTTAAGTTTC
rJMFF043E10+ AATAACAGAGAATCTGTTAAGTTTCATTTGXXXXXXXXXXXXXXXXXXXCTCTCCAGGGT
____________________________________________________________
consensus AATAACAGAGAATCTGTTAAGTTTCATTTGNNNNNNNNNNNNNNNNNNNCTCTCCAGGGT