Contig 013803:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF002J19-                       ACTTATCTTTTTTGTCCACTGCTATTACTGGTAAGTATTTTGTCCCCT
                      ____________________________________________________________
consensus                         ACTTATCTTTTTTGTCCACTGCTATTACTGGTAAGTATTTTGTCCCCT
 
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JMFF002J19-           TCCCTTTGTTTCCAAGCATGATGTTCTTTGCTCCTTCTGGGGCGTTAAAGATTCTTCAAA
                      ____________________________________________________________
consensus             TCCCTTTGTTTCCAAGCATGATGTTCTTTGCTCCTTCTGGGGCGTTAAAGATTCTTCAAA
 
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JMFF002J19-           GAAAATTTAATGTTTGGTATTCCTAGTTTTAGTTATATGTATGAATCTGGTGTCTGATAT
                      ____________________________________________________________
consensus             GAAAATTTAATGTTTGGTATTCCTAGTTTTAGTTATATGTATGAATCTGGTGTCTGATAT
 
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JMFF002J19-           AATTCTTGAACATTAAACAGGCTGTTTCAGTTTCATCTCTGCTTTCCTGGTAAATGGATT
JMFF043A13-                              GGCTGTTTCAGTTTCATCTCTGCTTTCCTGGTAAATGGATT
rJMFF002J19+                             GGCTGTTTCAGTTTCATCTCTGCTTTCCTGGTAAATGGATT
                      ____________________________________________________________
consensus             AATTCTTGAACATTAAACAGGCTGTTTCAGTTTCATCTCTGCTTTCCTGGTAAATGGATT
 
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JMFF002J19-           GCTGAATTTTTGGGGGTGAGAGAGAGAGAGAGAGAGAGAGATTGAAGATGTTGTTGAAGC
JMFF043A13-           GCTGAATTTTTGGGGGTGAGAGAGAGAGAGAGAGAGAGAGATTGAAGATGTTGTTGAAGC
rJMFF002J19+          GCTGAATTTTTGGGGGTGAGAGAGAGAGAGAGAGAGAGAGATTGAAGATGTTGTTGAAGC
                      ____________________________________________________________
consensus             GCTGAATTTTTGGGGGTGAGAGAGAGAGAGAGAGAGAGAGATTGAAGATGTTGTTGAAGC
 
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JMFF002J19-           AATCATCAAGTANGAATTTGAGGGCGAAAGGGTTCAAGTTGAAGCATGGATTTCAGATAT
JMFF043A13-           AATCATCAAGTAGGAATTTGAGGGCGAAAGGGTTCAAGTTGAAGCATGGATTTCAGATAT
rJMFF002J19+          AATCATCAAGTAGGAATTTGAGGGCGAAAGGGTTCAAGTTGAAGCATGGATTTCAGATAT
rJMFF043A13+                                   GAAAGGGTTCAAGTGNAATCATGGATTTCAGATAT
                      ____________________________________________________________
consensus             AATCATCAAGTAGGAATTTGAGGGCGAAAGGGTTCAAGTTGAAGCATGGATTTCAGATAT
 
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JMFF002J19-           GTGTGGTTCTTGCCCTCTGCATATGGCTGCTTTATCAGGTGAACAAATCTTACAGCAAGA
JMFF043A13-           GTGTGGTTCTTGCCCTCTGCATATGGCTGCTTTATCAGGTGAACAAATCTTACAGCAAGA
rJMFF002J19+          GTGTGGTTCTTGCCCTCTGCATATGGCTGCTTTATCAGGTGAACAAATCTTACAGCAAGA
rJMFF043A13+          GTGTGGTTCTTGCCCTCTGCATATGGCTGCTTTATCAGGTGAACAAATCTTACAGCAAGA
                      ____________________________________________________________
consensus             GTGTGGTTCTTGCCCTCTGCATATGGCTGCTTTATCAGGTGAACAAATCTTACAGCAAGA
 
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JMFF002J19-           AGGGTGGAATTGAGGGAGGTGGCAGTGAGGTATCTGGGCAGGG                 
JMFF043A13-           AGGGTGGAATTGAGGGAGGTGGCAGTGAGGTATCTGGGCAGGGAGGAGGAGAAAGCAGCA
rJMFF002J19+          AGGGTGGAATTGAGGGAGGTGGCAGTGAGGTATCTGGGCAGGGAGGAGGAGAAAGCAGCA
rJMFF043A13+          AGGGTGGAATTGAGGGAGGTGGCAGTGAGGTATCTGGGCAGGGAGGAGGAGAAAGCAGCA
                      ____________________________________________________________
consensus             AGGGTGGAATTGAGGGAGGTGGCAGTGAGGTATCTGGGCAGGGAGGAGGAGAAAGCAGCA
 
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JMFF043A13-           GGCTTCAGATTCTCAAGTTAGGGAGGAAGGGCCTGAACCCGGAGATTGAGGACGAGGAGG
rJMFF002J19+          GGCTTCAGATTCTCAAGTTAGGGAGGAAGGGCCTGAACCCGGAGATTGAGGACGAGGAGG
rJMFF043A13+          GGCTTCAGATTCTCAAGTTAGGGAGGAAGGGCCTGAACCCGGAGATTGAGGACGAGGAGG
                      ____________________________________________________________
consensus             GGCTTCAGATTCTCAAGTTAGGGAGGAAGGGCCTGAACCCGGAGATTGAGGACGAGGAGG
 
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JMFF043A13-           AGGACGCCGGCCTGAAACTCGCCGGAGATGATGAGCCGGAGTTGGATGATGAAGAGAAGA
rJMFF002J19+          AGGACGCCGGCCTGAAACTCGCCGGAGATGATGAGCCGGAGTTGGATGATGAAGAGAAGA
rJMFF043A13+          AGGACGCCGGCCTGAAACTCGCCGGAGATGATGAGCCGGAGTTGGATGATGAAGAGAAGA
                      ____________________________________________________________
consensus             AGGACGCCGGCCTGAAACTCGCCGGAGATGATGAGCCGGAGTTGGATGATGAAGAGAAGA
 
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JMFF043A13-           AGGTCCGGGCGGAGTTGGAGGATGAAGAGAGGAAGCTGAGGGAGAATGAAGGAGATGATG
rJMFF002J19+          AGGTCCGGGCGGAGTTGGAGGATGAAGAGAGGAAGCTGAGGGAGAATGAAGGAGATGATG
rJMFF043A13+          AGGTCCGGGCGGAGTTGGAGGATGAAGAGAGGAAGCTGAGGGAGAATGAAGGAGATGATG
                      ____________________________________________________________
consensus             AGGTCCGGGCGGAGTTGGAGGATGAAGAGAGGAAGCTGAGGGAGAATGAAGGAGATGATG
 
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JMFF043A13-           ACACAGATGGAGGTGAGCTAGACAAGGCAGAAGAGCAATTGGAGGATTTGATAGGGGAAG
rJMFF002J19+          ACACAGATGGAGGTGAGCTAGACAAGGCAGAAGAGCAATTGGAGGATTTGATAGGGGAAG
rJMFF043A13+          ACACAGATGGAGGTGAGCTAGACAAGGCAGAAGAGCAATTGGAGGATTTGATAGGGGAAG
                      ____________________________________________________________
consensus             ACACAGATGGAGGTGAGCTAGACAAGGCAGAAGAGCAATTGGAGGATTTGATAGGGGAAG
 
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JMFF043A13-           AGGATAAAGAAGAATAGGAAAATTTTAGTTTTTAGCCCACTCGGGTAGCTCAGTTTGTTC
rJMFF002J19+          AGGATAAAGAAGAATAGGAAAATTTTAGTTTTTAGCCCACTCGGGTAGCTCAGTTTGTTC
rJMFF043A13+          AGGATAAAGAAGAATAGGAAAATTTTAGTTTTTAGCCCACTCGGGTAGCTCAGTTTGTTC
                      ____________________________________________________________
consensus             AGGATAAAGAAGAATAGGAAAATTTTAGTTTTTAGCCCACTCGGGTAGCTCAGTTTGTTC
 
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JMFF043A13-           TCGAG                                                       
rJMFF002J19+          TCGAGTGATAAATTGTGGGCAAGAATAGGAAATTTTAAGTTTAGGAGGAGGAAAACCAAG
rJMFF043A13+          TCGAGTGATAAATTGTGGGCAAGAATAGGAAATTTTAAGTTTAGGAGGAGGAAAACCAAG
                      ____________________________________________________________
consensus             TCGAGTGATAAATTGTGGGCAAGAATAGGAAATTTTAAGTTTAGGAGGAGGAAAACCAAG
 
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rJMFF002J19+          TGTATTATTCAATCTGTAATCTCTGATTACATAGGATTTAGCAAACTGCATTCTATGTAA
rJMFF043A13+          TGTATTATTCAATCTGTAATCTCTGATTACATAGGATTTAGCAAACTGCATTCTATGTAA
                      ____________________________________________________________
consensus             TGTATTATTCAATCTGTAATCTCTGATTACATAGGATTTAGCAAACTGCATTCTATGTAA
 
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rJMFF002J19+          TCATCACTCTGCACT                                             
rJMFF043A13+          TCATCACTCTGCACTATAAAAATGTTCTTTTGAGACAGAAAAAAAAAAAAAACTCTCCAG
                      ____________________________________________________________
consensus             TCATCACTCTGCACTATAAAAATGTTCTTTTGAGACAGAAAAAAAAAAAAAACTCTCCAG