Contig 013799:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006E10Sequence471013117 (7)825013799 (5)ref|XP_009619492.1|1e-128PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic is
JMFF042H08Sequence629013117 (7)ref|XP_006346158.1|5e-11PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic-li621013799 (5)ref|XP_009619494.1|5e-77PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic is
JMSF015C17Sequence446013117 (7)781013799 (5)ref|XP_009619492.1|2e-131PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic is
JMSF032K12Sequence701013117 (7)ref|XP_006346158.1|3e-19PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic-li764013799 (5)ref|XP_009619492.1|9e-130PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic is
JMSF036J16Sequence647013117 (7)ref|XP_006346158.1|1e-16PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic-li748013799 (5)ref|XP_009619492.1|1e-125PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic is

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF032K12+ ACTACTGGAAAGTTCTATGGTGGGGGATATAGCTCACAAACCT
rJMSF036J16+ GGGGATATAGCTCACAAACCT
                      ____________________________________________________________
consensus ACTACTGGAAAGTTCTATGGTGGGGGATATAGCTCACAAACCT
 
. : . : . : . : . : . :
rJMSF032K12+ GCATACTTTGTACCTGATTCAATGTCAGTTTGGAATCTCCTCAGAGAATTCCGCATTAGG
rJMSF036J16+ GCATACTTTGTACCTGATTCAATGTCAGTTTGGAATCTCCTCAGAGAATTCCGCATTAGG
                      ____________________________________________________________
consensus GCATACTTTGTACCTGATTCAATGTCAGTTTGGAATCTCCTCAGAGAATTCCGCATTAGG
 
. : . : . : . : . : . :
rJMSF032K12+ AAAGTACACATGGCTGTTGTTCTTAATGAATATGGAGGAACTATTGGAATTGTAACCCTT
rJMSF036J16+ AAAGTACACATGGCTGTTGTTCTTAATGAATATGGAGGAACTATTGGAATTGTAACCCTT
                      ____________________________________________________________
consensus AAAGTACACATGGCTGTTGTTCTTAATGAATATGGAGGAACTATTGGAATTGTAACCCTT
 
. : . : . : . : . : . :
rJMSF032K12+ GAAGATGTGGTTGAGGAAATTGTTGGTGAAATCTTTGATGAAAATGATTCCAAAGAAGAG
rJMSF036J16+ GAAGATGTGGTTGAGGAAATTGTTGGTGAAATCTTTGATGAAAATGATTCCAAAGAAGAG
rJMSF015C17+ GAAGAG
rJMFF006E10+ GAAGAG
rJMFF042H08+ GAAAATGATTCCAAAGAAGAG
                      ____________________________________________________________
consensus GAAGATGTGGTTGAGGAAATTGTTGGTGAAATCTTTGATGAAAATGATTCCAAAGAAGAG
 
. : . : . : . : . : . :
rJMSF032K12+ ATCCAGAAGAAAACTGGCTACATTGTTCTCAGGGCTGAGGGAATCTTTGATGTGGATGCT
rJMSF036J16+ ATCCAGAAGAAAACTGGCTACATTGTTCTCAGGGCTGAGGGAATCTTTGATGTGGATGCT
rJMSF015C17+ ATCCAGAAGAAAACTGGCTACATTGTTCTCAGGGCTGAGGGAATCTTTGATGTGGATGCT
rJMFF006E10+ ATCCAGAAGAAAACTGGCTACATTGTTCTCAGGGCTGAGGGAATCTTTGATGTGGATGCT
rJMFF042H08+ ATCCAGAAGAAAACTGGCTACATTGTTCTCAGGGCTGAGGGAATCTNTGATGTGGATGCT
                      ____________________________________________________________
consensus ATCCAGAAGAAAACTGGCTACATTGTTCTCAGGGCTGAGGGAATCTTTGATGTGGATGCT
 
. : . : . : . : . : . :
rJMSF032K12+ AATACATCCATTGATCAGCTATCTGATGAACTCGAGATTAAAATGCCCGAGGATCATCAA
rJMSF036J16+ AATACATCCATTGATCAGCTATCTGATGAACTCGAGATTAAAATGCCCGAGGATCATCAA
rJMSF015C17+ AATACATCCATTGATCAGCTATCTGATGAACTCGAGATTAAAATGCCCGAGGATCATCAA
rJMFF006E10+ AATACATCCATTGATCAGCTATCTGATGAACTCGAGATTAAAATGCCCGAGGATCATCAA
rJMFF042H08+ AATACATCCATTGATCAGCTATCTGATGAACTCGAGATTAAAATGCCCGAGGATCATCAA
                      ____________________________________________________________
consensus AATACATCCATTGATCAGCTATCTGATGAACTCGAGATTAAAATGCCCGAGGATCATCAA
 
. : . : . : . : . : . :
rJMSF032K12+ TACGAAACAGTTTCTGGTTTTGTTTGTGAAGCATTTGGTTACATACCTAGGACGGGTGAG
rJMSF036J16+ TACGAAACAGTTTCTGGTTTTGTTTGTGAAGCATTTGGTTACATACCTAGGACGGGTGAG
rJMSF015C17+ TACGAAACAGTTTCTGGTTTTGTTTGTGAAGCATTTGGTTACATACCTAGGACGGGTGAG
rJMFF006E10+ TACGAAACAGTTTCTGGTTTTGTTTGTGAAGCATTTGGTTACATACCTAGGACGGGTGAG
rJMFF042H08+ TACGAAACAGTTTCTGGTTTTGTTTGTGAAGCATTTGGTTACATACCTAGGACGGGTGAG
                      ____________________________________________________________
consensus TACGAAACAGTTTCTGGTTTTGTTTGTGAAGCATTTGGTTACATACCTAGGACGGGTGAG
 
. : . : . : . : . : . :
rJMSF032K12+ AGCATAAAAGTGATACTTGAAAAGTCAAATCAAGAAGAACACAATGACTATTCTGGAAAG
rJMSF036J16+ AGCATAAAAGTGATACTTGAAAAGTCAAATCAAGAAGAACACAATGACTATTCTGGAAAG
rJMSF015C17+ AGCATAAAAGTGATACTTGAAAAGTCAAATCAAGAAGAACACAATGACTATTCTGGAAAG
rJMFF006E10+ AGCATAAAAGTGATACTTGAAAAGTCAAATCAAGAAGAACACAATGACTATTCTGGAAAG
rJMFF042H08+ AGCATAAAAGTGATACTTGAAAAGTCAAATCAAGAAGAACACAATGACTATTCTGGAAAG
                      ____________________________________________________________
consensus AGCATAAAAGTGATACTTGAAAAGTCAAATCAAGAAGAACACAATGACTATTCTGGAAAG
 
. : . : . : . : . : . :
rJMSF032K12+ GAATCTGATCAAGGGGATAAAAATGAAAAGAATCAAATTTATAAGCTTGAGATATTAGCA
rJMSF036J16+ GAATCTGATCAAGGGGATAAAAATGAAAAGAATCAAATTTATAAGCTTGAGATATTAGCA
rJMSF015C17+ GAATCTGATCAAGGGGATAAAAATGAAAAGAATCAAATTTATAAGCTTGAGATATTAGCA
rJMFF006E10+ GAATCTGATCAAGGGGATAAAAATGAAAAGAATCAAATTTATAAGCTTGAGATATTAGCA
rJMFF042H08+ GAATCTGATCAAGGGGATAAAAATGAAAAGAATCAAATTTATAAGCTTGAGATATTAGCA
                      ____________________________________________________________
consensus GAATCTGATCAAGGGGATAAAAATGAAAAGAATCAAATTTATAAGCTTGAGATATTAGCA
 
. : . : . : . : . : . :
rJMSF032K12+ GGAAATGCGAGAAAAGTGAGTGCGGTTCGATTTGAACGGATCAACCACGATGATGCAGAA
rJMSF036J16+ GGAAATGCGAGAAAAGTGAGTGCGGTTCGATTTGAACGGATCAACCACGATGATGCAGAA
rJMSF015C17+ GGAAATGCGAGAAAAGTGAGTGCGGTTCGATTTGAACGGATCAACCACGATGATGCAGAA
rJMFF006E10+ GGAAATGCGAGAAAAGTGAGTGCGGTTCGATTTGAACGGATCAACCACGATGATGCAGAA
rJMFF042H08+ GGAAATGCGAGAAAAGTGAGTGCGGTTCGATTTGAACGGATCAACCACGATGATGCAGAA
                      ____________________________________________________________
consensus GGAAATGCGAGAAAAGTGAGTGCGGTTCGATTTGAACGGATCAACCACGATGATGCAGAA
 
. : . : . : . : . : . :
rJMSF032K12+ CTAGAGACCAAAGGTGTGAGACACTGGGCCCCAAAAATTATCGCAAAATGGAACAAGCAA
rJMSF036J16+ CTAGAGACCAAAGGTGTGAGACACTGGGCCCCAAAAATTATCGCAAAATGGAACAAGCAA
rJMSF015C17+ CTAGAGACCAAAGGTGTGAGACACTGGGCCCCAAAAATTATCGCAAAATGGAACAAGCAA
rJMFF006E10+ CTAGAGACCAAAGGTGTGAGACACTGGGCCCCAAAAATTATCGCAAAATGGAACAAGCAA
rJMFF042H08+ CTAGAGACCAAAGGTGTGAGACACTGGGCCCCAAAAATTATCGCAAAATGGAACAAGCAA
                      ____________________________________________________________
consensus CTAGAGACCAAAGGTGTGAGACACTGGGCCCCAAAAATTATCGCAAAATGGAACAAGCAA
 
. : . : . : . : . : . :
rJMSF032K12+ GACGAATCAAACAATGAGGTCAGCTTTCATGGGAAAACAGATAACGGCAATTGCCTATCC
rJMSF036J16+ GACGAATCAAACAATGAGGTCAGCTTTCATGGGAAAACAGATAACGGCAATTGCCTATCC
rJMSF015C17+ GACGAATCAAACAATGAGGTCAGCTTTCATGGGAAAACAGATAACGGCAATTGCCTATCC
rJMFF006E10+ GACGAATCAAACAATGAGGTCAGCTTTCATGGGAAAACAGATAACGGCAATTGCCTATCC
rJMFF042H08+ GACGAATCAAACAATGAGGTCAGCTTTCATGGGAAAACAGATAACGGCAATTGCCTATCC
                      ____________________________________________________________
consensus GACGAATCAAACAATGAGGTCAGCTTTCATGGGAAAACAGATAACGGCAATTGCCTATCC
 
. : . : . : . : . : . :
rJMSF032K12+ AACAATTTTGTAAAATCTGAACACAAAAACAGTCATGACCTTCATAACGTTGAATGAATG
rJMSF036J16+ AACAATTTTGTAAAATCTGAACACAAAAACAGTCATGACCTTCATAACGTTGAATGAATG
rJMSF015C17+ AACAATTTTGTAAAATCTGAACACAAAAACAGTCATGACCTTCATAACGTTGAATGAATG
rJMFF006E10+ AACAATTTTGTAAAATCTGAACACAAAAACAGTCATGACCTTCATAACGTTGAATGAATG
rJMFF042H08+ AACAATTTTGTAAAATCTGAACACAAAAACAGTCATGACCTTCATAACGTTGAATGAATG
                      ____________________________________________________________
consensus AACAATTTTGTAAAATCTGAACACAAAAACAGTCATGACCTTCATAACGTTGAATGAATG
 
. : . : . : . : . : . :
rJMSF032K12+ G
rJMSF036J16+ GTC
rJMSF015C17+ GTC
rJMFF006E10+ GTCTACTTGTTACAACTATCTAATAATACTAAATTATCCGGGCAAAA
rJMFF042H08+ GTCTACTTGTTACAACTATCTAATAATACTAAATTATCCGGGCAAAATCCTTAATGAAAT
                      ____________________________________________________________
consensus GTCTACTTGTTACAACTATCTAATAATACTAAATTATCCGGGCAAAATCCTTAATGAAAT