Contig 013796:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042B10Sequence639011869 (2)gb|KHG27300.1|1e-128hypothetical protein F383_34673 [Gossypium arboreum]646013796 (2)ref|XP_011086497.1|97.4PREDICTED: nucleolar GTP-binding protein 1-like [Sesamum indicum] ref|XP_0110864
JMSF002B21Sequence313011869 (2)gb|KHG27300.1|2e-37hypothetical protein F383_34673 [Gossypium arboreum]755013796 (2)ref|XP_009782696.1|174PREDICTED: nucleolar GTP-binding protein 1-like [Nicotiana sylvestris] ref|XP_00

Alignment

This contig is upended


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rJMSF002B21+ GCA
                      ____________________________________________________________
consensus GCA
 
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rJMSF002B21+ CAGGATTAAGAAGAGTACAGCGGAGAGCCGACCAACAGTACCAAGGAAATTTGACAAGGA
                      ____________________________________________________________
consensus CAGGATTAAGAAGAGTACAGCGGAGAGCCGACCAACAGTACCAAGGAAATTTGACAAGGA
 
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rJMSF002B21+ CAAGGAGTTTACTTCAGAGAGAATGGGAAGGCAGTTGTCTGCTCTGGGTCTTGATCCAAG
                      ____________________________________________________________
consensus CAAGGAGTTTACTTCAGAGAGAATGGGAAGGCAGTTGTCTGCTCTGGGTCTTGATCCAAG
 
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rJMSF002B21+ TCTTGCAATCAACAGAGCTCGTAGCAAATCCCGGGGCCGAAAGAGGGAAAGATCAGTTGA
                      ____________________________________________________________
consensus TCTTGCAATCAACAGAGCTCGTAGCAAATCCCGGGGCCGAAAGAGGGAAAGATCAGTTGA
 
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rJMSF002B21+ CCGCACTGAGGGTATGGAAGCAATGGATGTTGATGATAACACTCCCAATAAAAAATTGCG
rJMFF042B10+ TGGAAGCAATGGATGTTGATGATAACACTCCCAATAAAAAATTGCG
                      ____________________________________________________________
consensus CCGCACTGAGGGTATGGAAGCAATGGATGTTGATGATAACACTCCCAATAAAAAATTGCG
 
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rJMSF002B21+ CTTAATGTCTAGACCTAGGTCAAGGTCAAAGTCACGGCCTCCAGGTGAAGTGGTACCAGG
rJMFF042B10+ CTTAATGTCTAGACCTAGGTCAAGGTCAAAGTCACGGCCTCCAGGTGAAGTGGTACCAGG
                      ____________________________________________________________
consensus CTTAATGTCTAGACCTAGGTCAAGGTCAAAGTCACGGCCTCCAGGTGAAGTGGTACCAGG
 
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rJMSF002B21+ GGAGGGCTTCAAGGACACTGCACAAAAGTCAAAGGCTCTAAAACTGTTTAAGAAATCTGC
rJMFF042B10+ GGAGGGCTTCAAGGACACTGCACAAAAGTCAAAGGCTCTAAAACTGTTTAAGAAATCTGC
                      ____________________________________________________________
consensus GGAGGGCTTCAAGGACACTGCACAAAAGTCAAAGGCTCTAAAACTGTTTAAGAAATCTGC
 
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rJMSF002B21+ AAAGAAGAGGAACAAGGATGCTCGCCGTGGAGAAGCTGATAGAACGATCCCTACTCTGAA
rJMFF042B10+ AAAGAAGAGGAACAAGGATGCTCGCCGTGGAGAAGCTGATAGAACGATCCCTACTCTGAA
                      ____________________________________________________________
consensus AAAGAAGAGGAACAAGGATGCTCGCCGTGGAGAAGCTGATAGAACGATCCCTACTCTGAA
 
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rJMSF002B21+ ACCAAAACACTTGTTCTCTGGCAAGCGCTCTACTGGCAAAACGGATAGGCGCTAAGAAAA
rJMFF042B10+ ACCAAAACACTTGTTCTCTGGCAAGCGCTCTACTGGCAAAACGGATAGGCGCTAAGAAAA
                      ____________________________________________________________
consensus ACCAAAACACTTGTTCTCTGGCAAGCGCTCTACTGGCAAAACGGATAGGCGCTAAGAAAA
 
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rJMSF002B21+ ATCTAGGGTGTCTATCAACTTTGGAGCTCAATTTTCAATATATCAAATTGTTTATGAGAT
rJMFF042B10+ ATCTAGGGTGTCTATCAACTTTGGAGCTCAATTTTCAATATATCAAATTGTTTATGAGAT
                      ____________________________________________________________
consensus ATCTAGGGTGTCTATCAACTTTGGAGCTCAATTTTCAATATATCAAATTGTTTATGAGAT
 
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rJMSF002B21+ TTGAACAAAGCTCCACAAATTTTAGAATGGGTTGCGTAGCAAGTATCAAAGCTTTTGTTG
rJMFF042B10+ TTGAACAAAGCTCCACAAATTTTAGAATGGGTTGCGTAGCAAGTATCAAAGCTTTTGTTG
                      ____________________________________________________________
consensus TTGAACAAAGCTCCACAAATTTTAGAATGGGTTGCGTAGCAAGTATCAAAGCTTTTGTTG
 
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rJMSF002B21+ TTTCTGGAGTTGGATGGGATCAACTGAGCCGCATTACTTTTTTGGTTATTGCAATTTATT
rJMFF042B10+ TTTCTGGAGTTGGATGGGATCAACTGAGCCGCATTACTTTTTTGGTTATTGCAATTTATT
                      ____________________________________________________________
consensus TTTCTGGAGTTGGATGGGATCAACTGAGCCGCATTACTTTTTTGGTTATTGCAATTTATT
 
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rJMSF002B21+ GGATTTTGTTATTTCACATAGTGTTTATTTTTCTTTTAAATCCTCGTGACCATTGGATTT
rJMFF042B10+ GGATTTTGTTATTTCACATAGTGTTTATTTTTCTTTTAAATCCTCGTGACCATTGGATTT
                      ____________________________________________________________
consensus GGATTTTGTTATTTCACATAGTGTTTATTTTTCTTTTAAATCCTCGTGACCATTGGATTT
 
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rJMSF002B21+ TGTTTCTGTATACCATGACATCATCGCAGTAT
rJMFF042B10+ TGTTTCTGTATACCATGACATCATCGCAGTATTTGGTTGAATTTTGCTTAATATATCATT
                      ____________________________________________________________
consensus TGTTTCTGTATACCATGACATCATCGCAGTATTTGGTTGAATTTTGCTTAATATATCATT
 
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rJMFF042B10+ TATGCTGTTGTAGTGCXXXXXXXXXXXXXXXXXXXCTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus TATGCTGTTGTAGTGCNNNNNNNNNNNNNNNNNNNCTCTCCAGGGTGATCCGCCATAAGG