clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF006B19 | Sequence | 549 | 013795 (5) | ref|XP_009804221.1| | 4e-60 | PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Nicotiana s | 751 | 013795 (5) | ref|XP_009804221.1| | 2e-90 | PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Nicotiana s |
JMFF042A23 | Sequence | 658 | 013795 (5) | ref|XP_009594400.1| | 1e-75 | PREDICTED: phenazine biosynthesis-like domain-containing protein 1 isoform X3 [ | 618 | 013795 (5) | ref|XP_009804221.1| | 4e-72 | PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Nicotiana s |
JMSF003E01 | Sequence | 408 | 018822 | gb|EYU45225.1| | 4e-17 | hypothetical protein MIMGU_mgv1a019638mg, partial [Erythranthe guttata] | 247 | 013795 (5) | ref|XP_009795628.1| | 5e-21 | PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Nicotiana s |
This contig is upended
. : . : . : . : . : . :
JMFF006B19- GGGCGGTTGTCTACTAAGCTAAGCCTTTCTTCAGTCTTCAATG
JMFF042A23- CGGGGCGGTTGTCTACTAAGCTAAGCCTTTCTTCAGTCTTCAATG
____________________________________________________________
consensus CGGGGCGGTTGTCTACTAAGCTAAGCCTTTCTTCAGTCTTCAATG
. : . : . : . : . : . :
JMFF006B19- GCGAAGAAGCCTGTGAAATACTGTGTGGTGGATGCGTTTACAGACTCGGCTTTCAAAGGA
JMFF042A23- GCGAAGAAGCCTGTGAAATACTGTGTGGTGGATGCGTTTACAGACTCGGCTTTCAAAGGA
____________________________________________________________
consensus GCGAAGAAGCCTGTGAAATACTGTGTGGTGGATGCGTTTACAGACTCGGCTTTCAAAGGA
. : . : . : . : . : . :
JMFF006B19- AACCCCGCTGCTGTTTGTTTGTTAGAGGAAGAAGAAGACAGAAGCGATGAATGGCTACAA
JMFF042A23- AACCCCGCTGCTGTTTGTTTGTTAGAGGAAGAAGAAGACAGAAGCGATGAATGGCTACAA
____________________________________________________________
consensus AACCCCGCTGCTGTTTGTTTGTTAGAGGAAGAAGAAGACAGAAGCGATGAATGGCTACAA
. : . : . : . : . : . :
JMFF006B19- GCTGTTGCTCGGGAGTTCAACATCTCCGAGACTTGTTACCTAACTCCGATCACTCATTCC
JMFF042A23- GCTGTTGCTCGGGAGTTCAACATCTCCGAGACTTGTTACCTAACTCCGATCACTCATTCC
____________________________________________________________
consensus GCTGTTGCTCGGGAGTTCAACATCTCCGAGACTTGTTACCTAACTCCGATCACTCATTCC
. : . : . : . : . : . :
JMFF006B19- GGCAACGCTTTGCTCGATCCTACTGCCACTCCCCATCCCAAGTTCCGTCTTCGCTGGTTC
JMFF042A23- GGCAACGCTTTGCTCGATCCTACTGCCACTCCCCATCCCAAGTTCCGTCTTCGCTGGTTC
____________________________________________________________
consensus GGCAACGCTTTGCTCGATCCTACTGCCACTCCCCATCCCAAGTTCCGTCTTCGCTGGTTC
. : . : . : . : . : . :
JMFF006B19- ACTCCCGTGGCTGAGGTAGATCTATGTGGACATGCAACTCTGGCAGCTGCGTATTTCCTA
JMFF042A23- ACTCCCGTGGCTGAGGTAGATCTATGTGGACATGCAACTCTGGCAGCTGCGTATTTCCTA
rJMFF006B19+ AGGTAGATCTATGTGGACATGCAACTCTGGCAGCTGCGTATTTCCTA
____________________________________________________________
consensus ACTCCCGTGGCTGAGGTAGATCTATGTGGACATGCAACTCTGGCAGCTGCGTATTTCCTA
. : . : . : . : . : . :
JMFF006B19- TTTCTTTATGGTTTCGTCAAAACTGATATCATCGAGTTCTTGACCCTATCTGGGATTTTG
JMFF042A23- TTTCTTTATGGTTTCGTCAAAACTGATATCATCGAGTTCTTGACCCTATCTGGGATTTTG
rJMFF006B19+ TTTCTTTATGGTTTCGTCAAAACTGATATCATCGAGTTCTTGACCCTATCTGGGATTTTG
____________________________________________________________
consensus TTTCTTTATGGTTTCGTCAAAACTGATATCATCGAGTTCTTGACCCTATCTGGGATTTTG
. : . : . : . : . : . :
JMFF006B19- ACTGCCAGAAGAGTGCCAGACAAGAAAGAAGGCTTCTTTGTTGAGTTAAATTTTCCAATT
JMFF042A23- ACTGCCAGAAGAGTGCCAGACAAGAAAGAAGGCTTCTTTGTTGAGTTAAATTTTCCAATT
rJMFF006B19+ ACTGCCAGAAGAGTGCCAGACAAGAAAGAAGGCTTCTTTGTTGAGTTAAATTTTCCAATT
rJMFF042A23+ GAGTTAAATTTTCCAATT
____________________________________________________________
consensus ACTGCCAGAAGAGTGCCAGACAAGAAAGAAGGCTTCTTTGTTGAGTTAAATTTTCCAATT
. : . : . : . : . : . :
JMFF006B19- GTCCATGTCTTGGAGACCAACTATGCTGCGATTCCACCAATCTCAAAGGACTTTAACAAA
JMFF042A23- GTCCATGTCTTGGAGACCAACTATGCTGCGATTCCACCAATCTCAAAGGACTTTAACAAA
rJMSF003E01+ TCTCAAAGGACTNTANCAAA
rJMFF006B19+ GTCCATGTCTTGGAGACCAACTATGCTGCGATTCCACCAATCTCAAAGGACTTTAACAAA
rJMFF042A23+ GTCCATGTCTTGGAGACCAACTATGCTGCGATTCCACCAATCTCAAAGGACTTTAACAAA
____________________________________________________________
consensus GTCCATGTCTTGGAGACCAACTATGCTGCGATTCCACCAATCTCAAAGGACTTTAACAAA
. : . : . : . : . : . :
JMFF006B19- GCATCTGTGG
JMFF042A23- GCATCTGTGGTTGAGATCAATAAGACTGACAAGGATGACCTCTTTGTTGTGCTTTCATCA
rJMSF003E01+ GCATNCGTGGTTNAGATCANTAAGACTGACAAGGATGACCTCTTTNTTGTGCNTTCATCA
rJMFF006B19+ GCATCTGTGGTTGAGATCAATAAGACTGACAAGGATGACCTCTTTGTTGTGCTTTCATCA
rJMFF042A23+ GCATCTGTGGTTGAGATCAATAAGACTGACAAGGATGACCTCTTTGTTGTGCTTTCATCA
____________________________________________________________
consensus GCATCTGTGGTTGAGATCAATAAGACTGACAAGGATGACCTCTTTGTTGTGCTTTCATCA
. : . : . : . : . : . :
JMFF042A23- GGGGAAGCTGTTGCAGGATTACAACCACAGTTTAATGAGATACANAAATGCCCATCAAAG
rJMSF003E01+ GGGGAAGCTGTTGCAGGATTACAACCACAGTTTAATGAGATACAAAAATGCCCATCAAAG
rJMFF006B19+ GGGGAAGCTGTTGCAGGATTACAACCACAGTTTAATGAGATACAAAAATGCCCATCAAAG
rJMFF042A23+ GGGGAAGCTGTTGCAGGATTACAACCACAGTTTAATGAGATACAAAAATGCCCATCAAAG
____________________________________________________________
consensus GGGGAAGCTGTTGCAGGATTACAACCACAGTTTAATGAGATACAAAAATGCCCATCAAAG
. : . : . : . : . : . :
JMFF042A23- GGAGTGATTGTTA
rJMSF003E01+ GGAGTGATCGTTACAGGACCTGCTCCTCCAGGATCCGGATTTGATTTNTATAGTCGGTTC
rJMFF006B19+ GGAGTGATTGTTACAGGACCTGCTCCTCCAGGATCCGGATTTGATTTTTATAGTCGGTTC
rJMFF042A23+ GGAGTGATTGTTACAGGACCTGCTCCTCCAGGATCCGGATTTGATTTTTATAGTCGGTTC
____________________________________________________________
consensus GGAGTGATTGTTACAGGACCTGCTCCTCCAGGATCCGGATTTGATTTTTATAGTCGGTTC
. : . : . : . : . : . :
rJMSF003E01+ TCTTGCCNCAAANTGGGAATTCCAGAGG
rJMFF006B19+ TTTTGCCCCAAATTGGGAATTCCAGAGGATCCTGTTTGTGGAAGTGCTCATTGTGCCTTG
rJMFF042A23+ TTTTGCCCCAAATTGGGAATTCCAGAGGATCCTGTTTGTGGAAGTGCTCATTGTGCCTTG
____________________________________________________________
consensus TTTTGCCCCAAATTGGGAATTCCAGAGGATCCTGTTTGTGGAAGTGCTCATTGTGCCTTG
. : . : . : . : . : . :
rJMFF006B19+ GCTTCCTATTGGCATAAGATTCTAGGGAAACGGGACTTTATTGCTTATGCGGCATCACCT
rJMFF042A23+ GCTTCCTATTGGCATAAGATTCTAGGGAAACGGGACTTTATTGCTTATGCGGCATCACCT
____________________________________________________________
consensus GCTTCCTATTGGCATAAGATTCTAGGGAAACGGGACTTTATTGCTTATGCGGCATCACCT
. : . : . : . : . : . :
rJMFF006B19+ AGAAGTGGTGTGTTGAATGTGCGTATAGATGAGGAGAATCAAAGAGTACTTTTGCAAGGG
rJMFF042A23+ AGAAGTGGTGTGTTGAATGTGCGTATAGATGAGGAGAATCAAAGAGTACTTTTGCAAGGG
____________________________________________________________
consensus AGAAGTGGTGTGTTGAATGTGCGTATAGATGAGGAGAATCAAAGAGTACTTTTGCAAGGG
. : . : . : . : . : . :
rJMFF006B19+ AAAGCTTGTGCAGTGATGGAGGGTTCTCTTTTGGTTTAGTATAGGAAAAAGTTTATGCAA
rJMFF042A23+ AAAGCTTGTGCAGTGATGGAGGGTTCTCTTTTGGTTTAGTATAGGAAAAAGTTTATGCAA
____________________________________________________________
consensus AAAGCTTGTGCAGTGATGGAGGGTTCTCTTTTGGTTTAGTATAGGAAAAAGTTTATGCAA
. : . : . : . : . : . :
rJMFF006B19+ ATCATGTCTGTGTTAAAAGAATGCCTCAAATGAAGACAGATCATTAAAAATACATTGATG
rJMFF042A23+ ATCATGTCTGTGTTAAAAGAATGCCTCAAATGAAGACAGATCATTAAAAATACATTGATG
____________________________________________________________
consensus ATCATGTCTGTGTTAAAAGAATGCCTCAAATGAAGACAGATCATTAAAAATACATTGATG
. : . : . : . : . : . :
rJMFF006B19+ AATCAATTCAAGACTACAGAGCTTCTCAGAAATGGGAA
rJMFF042A23+ AATCAATTCAAGACTACAGAGCTTCTCAGAAATGGGAATGGTTTCTTTCTTGTTTTCCTG
____________________________________________________________
consensus AATCAATTCAAGACTACAGAGCTTCTCAGAAATGGGAATGGTTTCTTTCTTGTTTTCCTG