Contig 013794:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002G03Sequence562013794 (9)ref|XP_006350379.1|1e-72PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-lik749013794 (9)ref|NP_001234574.1|3e-73succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial [Solanum lycop
JMFF020C10Sequence560013794 (9)ref|XP_006350379.1|8e-76PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-lik730013794 (9)ref|NP_001234574.1|6e-68succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial [Solanum lycop
JMFF025A18Sequence739013794 (9)gb|AFL48180.1|1e-71succinyl-CoA synthetase [Capsicum annuum] gb|AFL48181.1| succinyl-CoA synthetase
JMFF041O09Sequence655013794 (9)ref|XP_006350379.1|1e-111PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-lik578013794 (9)ref|XP_009788411.1|2e-38PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-lik
JMSF040K13Sequence656013794 (9)ref|XP_006350379.1|5e-108PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-lik932013794 (9)gb|AFL48180.1|3e-118succinyl-CoA synthetase [Capsicum annuum] gb|AFL48181.1| succinyl-CoA synthetase

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF002G03- ATTTCAAATCAAAAAAGAGGAGTAAACATAAGCTAAGCTACGAGAGAGAG
JMFF020C10- ATTTCAAATCAAAAAAGAGGAGTAAACATAAGCTAAGCTACGAGAGAGAG
JMSF040K13- AAGCTAAGCTACGAGAGAGAG
                      ____________________________________________________________
consensus ATTTCAAATCAAAAAAGAGGAGTAAACATAAGCTAAGCTACGAGAGAGAG
 
. : . : . : . : . : . :
JMFF002G03- AGAGAGAAAAAGAGAAAGAGAAAGAGAGAGTAGTTATGGCTTGGCAAACGGCGAGATTGA
JMFF020C10- AGAGAGAAAAAGAGAAAGAGAAAGAGAGAGTAGTTATGGCTTGGCAAACGGCGAGATTGA
JMSF040K13- AGAGAGAAAAAGAGAAAGAGAAAGAGAGAGTAGTTATGGCTTGGCAAACGGCGAGATTGA
JMFF041O09- AGAAAGAGAGAGTAGTTATGGCTTGGCAAACGGCGAGATTGA
                      ____________________________________________________________
consensus AGAGAGAAAAAGAGAAAGAGAAAGAGAGAGTAGTTATGGCTTGGCAAACGGCGAGATTGA
 
. : . : . : . : . : . :
JMFF002G03- TCGCGAACGTGTCAAAGAAGGTGAGGCCTATCACGCAATCACCGCTGTGGCAGCAGCAGC
JMFF020C10- TCGCGAACGTGTCAAAGAAGGTGAGGCCTATCACGCAATCACCGCTGTGGCAGCAGCAGC
JMSF040K13- TCGCGAACGTGTCAAAGAAGGTGAGGCCTATCACGCAATCACCGCTGTGGCAGCAGCAGC
JMFF041O09- TCGCGAACGTGTCAAAGAAGGTGAGGCCTATCACGCAATCACCGCTGTGGCAGCAGCAGC
                      ____________________________________________________________
consensus TCGCGAACGTGTCAAAGAAGGTGAGGCCTATCACGCAATCACCGCTGTGGCAGCAGCAGC
 
. : . : . : . : . : . :
JMFF002G03- AGCACCGACTATTCGGATCCCCGGCGCCGGAAGTCTTCGTGGACAAGAACACCCGCGTCA
JMFF020C10- AGCACCGACTATTCGGATCCCCGGCGCCGGAAGTCTTCGTGGACAAGAACACCCGCGTCA
JMSF040K13- AGCACCGACTATTCGGATCCCCGGCGCCGGAAGTCTTCGTGGACAAGAACACCCGCGTCA
JMFF041O09- AGCACCGACTATTCGGATCCCCGGCGCCGGAAGTCTTCGTGGACAAGAACACCCGCGTCA
                      ____________________________________________________________
consensus AGCACCGACTATTCGGATCCCCGGCGCCGGAAGTCTTCGTGGACAAGAACACCCGCGTCA
 
. : . : . : . : . : . :
JMFF002G03- TATGTCAAGGTATCACGGGGAAGAACGGCACCTTCCACACCGAACAGGCCATCGAATATG
JMFF020C10- TATGTCAAGGTATCACGGGGAAGAACGGCACCTTCCACACCGAACAGGCCATCGAATATG
JMSF040K13- TATGTCAAGGTATCACGGGGAAGAACGGCACCTTCCACACCGAACAGGCCATCGAATATG
JMFF041O09- TATGTCAAGGTATCACGGGGAAGAACGGCACCTTCCACACCGAACAGGCCATCGAATATG
                      ____________________________________________________________
consensus TATGTCAAGGTATCACGGGGAAGAACGGCACCTTCCACACCGAACAGGCCATCGAATATG
 
. : . : . : . : . : . :
JMFF002G03- GCACCAAAATGGTTGGTGGAGTCACCCCAAAAAAGGGTGGTACTGAACACCTTGGACTTC
JMFF020C10- GCACCAAAATGGTTGGTGGAGTCACCCCAAAAAAGGGTGGTACTGAACACCTTGGACTTC
JMSF040K13- GCACCAAAATGGTTGGTGGAGTCACCCCAAAAAAGGGTGGTACTGAACACCTTGGACTTC
JMFF041O09- GCACCAAAATGGTTGGTGGAGTCACCCCAAAAAAGGGTGGTACTGAACACCTTGGACTTC
                      ____________________________________________________________
consensus GCACCAAAATGGTTGGTGGAGTCACCCCAAAAAAGGGTGGTACTGAACACCTTGGACTTC
 
. : . : . : . : . : . :
JMFF002G03- CAGTTTTCAACACTGTTGCAGACGCAAAAGCTGAAACCAAGGCTAATGCTTCAGTTATCT
JMFF020C10- CAGTTTTCAACACTGTTGCAGACGCAAAAGCTGAAACCAAGGCTAATGCTTCAGTTATCT
JMSF040K13- CAGTTTTCAACACTGTTGCAGACGCAAAAGCTGAAACCAAGGCTAATGCTTCAGTTATCT
JMFF041O09- CAGTTTTCAACACTGTTGCAGACGCAAAAGCTGAAACCAAGGCTAATGCTTCAGTTATCT
                      ____________________________________________________________
consensus CAGTTTTCAACACTGTTGCAGACGCAAAAGCTGAAACCAAGGCTAATGCTTCAGTTATCT
 
. : . : . : . : . : . :
JMFF002G03- ATGTACCTCCCCCCTTTGCTGGAGCAGCGATTATGGAGGCAATGGAAGCTGAATTAGATT
JMFF020C10- ATGTACCTCCCCCCTTTGCTGGAGCAGCGATTATGGAGGCAATGGAAGCTGAATTAGATT
JMSF040K13- ATGTACCTCCCCCCTTTGCTGGAGCAGCGATTATGGAGGCAATGGAAGCTGAATTAGATT
JMFF041O09- ATGTACCTCCCCCCTTTGCTGGAGCAGCGATTATGGAGGCAATGGAAGCTGAATTAGATT
rJMSF040K13+ GAGCAGCGATTATGGAGGCAATGGAAGCTGAATTAGATT
                      ____________________________________________________________
consensus ATGTACCTCCCCCCTTTGCTGGAGCAGCGATTATGGAGGCAATGGAAGCTGAATTAGATT
 
. : . : . : . : . : . :
JMFF002G03- T-GGTTGTGTGCATCACAGAGGGAATTCCTCAGCATGATATGGTTAAAGTAAAAGCTGCT
JMFF020C10- T-GGTTGTGTGCATCACAGAGGGAATTCCTCAGCATGATATGGTTAAAGTAAAAGCTGCT
JMSF040K13- T-GGTTGTGTGCATCACAGAGGGAATTCCTCAGCATGATATGGTTAAAGTAAAAGCTGCT
JMFF041O09- T-GGTTGTGTGCATCACAGAGGGAATTCCTCAGCATGATATGGTTAAAGTAAAAGCTGCT
rJMSF040K13+ TNGGTTGTGTGCATCACAGAGGGAATTCCTCAGCATGATATGGTTAAAGTAAAAGCTGCT
                      ____________________________________________________________
consensus T-GGTTGTGTGCATCACAGAGGGAATTCCTCAGCATGATATGGTTAAAGTAAAAGCTGCT
 
. : . : . : . : . : . :
JMFF002G03- CTTAAACAGCAGA
JMFF020C10- CTTAAACAGCAGACCAAAACTCGTCTTATTG
JMSF040K13- CTTAAACAGCAGACCAAAACTCGTCTTATTGGTCCAAATTGCCCTGGTATCATCAAACCA
JMFF041O09- CTTAAACAGCAGACCAAAACTCGTCTTATTGGTCCAAATTGCCCTGGTATCATCAAACCA
rJMSF040K13+ CTTAAACAGCAGACCAAAACTCGTCTTATTGGTCCAAATTGCCCTGGTATCATCAAACCA
                      ____________________________________________________________
consensus CTTAAACAGCAGACCAAAACTCGTCTTATTGGTCCAAATTGCCCTGGTATCATCAAACCA
 
. : . : . : . : . : . :
JMSF040K13- GGTGAATGCAAAATTGGAATTATGCCTGGATACATTCACAAGCCTGGACGTATTGGAATT
JMFF041O09- GGTGAATGCAAAATTGGAATTATGCCTGGATACATTCACAAGCCTGGACGTATTGGAATT
rJMSF040K13+ GGTGAATGCAAAATTGGAATTATGCCTGGATACATTCACAAGCCTGGACGTATTGGAATT
                      ____________________________________________________________
consensus GGTGAATGCAAAATTGGAATTATGCCTGGATACATTCACAAGCCTGGACGTATTGGAATT
 
. : . : . : . : . : . :
JMSF040K13- GTTTCTCGATCTGGCACATTGACATATGAAGCAGT
JMFF041O09- GTTTCTCGATCTGGCACATTGACATATGAAGCAGTTTTCCAAACGACTG
rJMSF040K13+ GTTTCTCGATCTGGCACATTGACATATGAAGCAGTTTTCCAAACAACTGCTGTTGGCCTT
rJMFF025A18+ GATCTGGCACATTGACATATGAAGCAGTTTTCCAAACAACTGCTGTTGGCCTT
rJMFF020C10+ CATTGACATATGAAGCAGTTTTCCAANCAACTGCTGTTGNCCTT
rJMFF002G03+ GATCTGGCACATTGACATATGAAGCAGTTTTCCAAACAACTGCTGTTGGCCTT
                      ____________________________________________________________
consensus GTTTCTCGATCTGGCACATTGACATATGAAGCAGTTTTCCAAACAACTGCTGTTGGCCTT
 
. : . : . : . : . : . :
rJMSF040K13+ GGGCAATCAACCTGTGTGGGGATTGGTGGGGACCCTTTCAATGGTACAAATTTTGTTGAT
rJMFF025A18+ GGGCAATCAACCTGTGTGGGGATTGGTGGGGACCCTTTCAATGGTACAAATTTTGTTGAT
rJMFF020C10+ GGGCAATCAACCTGTGTGGGGATTGGTGGGGACCCTTTCAATGGTACAAATTTTGTTGAT
rJMFF002G03+ GGGCAATCAACCTGTGTGGGGATTGGTGGGGACCCTTTCAATGGTACAAATTTTGTTGAT
                      ____________________________________________________________
consensus GGGCAATCAACCTGTGTGGGGATTGGTGGGGACCCTTTCAATGGTACAAATTTTGTTGAT
 
. : . : . : . : . : . :
rJMSF040K13+ TGCTTAGAGCGATTTGTTGCTGACCCACAGACTGAAGGTATTGTTCTTATTGGTGAGATA
rJMFF025A18+ TGCTTAGAGCGATTTGTTGCTGACCCACAGACTGAAGGTATTGTTCTTATTGGTGAGATA
rJMFF020C10+ TGCTTAGAGCGATTTGTTGCTGACCCACAGACTGAAGGTATTGTTCTTATTGGTGAGATA
rJMFF002G03+ TGCTTAGAGCGATTTGTTGCTGACCCACAGACTGAAGGTATTGTTCTTATTGGTGAGATA
                      ____________________________________________________________
consensus TGCTTAGAGCGATTTGTTGCTGACCCACAGACTGAAGGTATTGTTCTTATTGGTGAGATA
 
. : . : . : . : . : . :
rJMSF040K13+ GGTGGTACTGCAGAAGAGGAAGCTGCAGCCTTCATAAAGGAAAGTGGGACTGAGAAGCCT
rJMFF025A18+ GGTGGTACTGCAGAAGAGGAAGCTGCAGCCTTCATAAAGGAAAGTGGGACTGAGAAGCCT
rJMFF020C10+ GGTGGTACTGCAGAAGAGGAAGCTGCAGCCTTCATAAAGGAAAGTGGGACTGAGAAGCCT
rJMFF002G03+ GGTGGTACTGCAGAAGAGGAAGCTGCAGCCTTCATAAAGGAAAGTGGGACTGAGAAGCCT
rJMFF041O09+ CTGCAGCCTTCATAAAGGAAAGTGGGACTGAGAAGCCT
                      ____________________________________________________________
consensus GGTGGTACTGCAGAAGAGGAAGCTGCAGCCTTCATAAAGGAAAGTGGGACTGAGAAGCCT
 
. : . : . : . : . : . :
rJMSF040K13+ GTTGTTGCTTTTATTGCTGGACTTACTGCCCCACCTGGACGGCGGATGGGTCATGCTGGA
rJMFF025A18+ GTTGTTGCTTTTATTGCTGGACTTACTGCCCCACCTGGACGGCGGATGGGTCATGCTGGA
rJMFF020C10+ GTTGTTGCTTTTATTGCTGGACTTACTGCCCCACCTGGACGGCGGATGGGTCATGCTGGA
rJMFF002G03+ GTTGTTGCTTTTATTGCTGGACTTACTGCCCCACCTGGACGGCGGATGGGTCATGCTGGA
rJMFF041O09+ GTTGTTGCTTTTATTGCTGGACTTACTGCCCCACCTGGACGGCGGATGGGTCATGCTGGA
                      ____________________________________________________________
consensus GTTGTTGCTTTTATTGCTGGACTTACTGCCCCACCTGGACGGCGGATGGGTCATGCTGGA
 
. : . : . : . : . : . :
rJMSF040K13+ GCTATAGTTTCTGGGGGGAAGGGTACAGCTCAAGACAAAATCAGGACCCTTAAAGAAGCT
rJMFF025A18+ GCTATAGTTTCTGGGGGGAAGGGTACAGCTCAAGACAAAATCAGGACCCTTAAAGAAGCT
rJMFF020C10+ GCTATAGTTTCTGGGGGGAAGGGTACAGCTCAAGACAAAATCAGGACCCTTAAAGAAGCT
rJMFF002G03+ GCTATAGTTTCTGGGGGGAAGGGTACAGCTCAAGACAAAATCAGGACCCTTAAAGAAGCT
rJMFF041O09+ GCTATAGTTTCTGGGGGGAAGGGTACAGCTCAAGACAAAATCAGGACCCTTAAAGAAGCT
                      ____________________________________________________________
consensus GCTATAGTTTCTGGGGGGAAGGGTACAGCTCAAGACAAAATCAGGACCCTTAAAGAAGCT
 
. : . : . : . : . : . :
rJMSF040K13+ GGTGTAACAGTATGTGAATCTCCAGCAAAACTTGGAACCACAATGCTTGATGTCTTCACA
rJMFF025A18+ GGTGTAACAGTATGTGAATCTCCAGCAAAACTTGGAACCACAATGCTTGATGTCTTCACA
rJMFF020C10+ GGTGTAACAGTATGTGAATCTCCAGCAAAACTTGGAACCACAATGCTTGATGTCTTCACA
rJMFF002G03+ GGTGTAACAGTATGTGAATCTCCAGCAAAACTTGGAACCACAATGCTTGATGTCTTCACA
rJMFF041O09+ GGTGTAACAGTATGTGAATCTCCAGCAAAACTTGGAACCACAATGCTTGATGTCTTCACA
                      ____________________________________________________________
consensus GGTGTAACAGTATGTGAATCTCCAGCAAAACTTGGAACCACAATGCTTGATGTCTTCACA
 
. : . : . : . : . : . :
rJMSF040K13+ AAGAGGGGTCTTCTGTAAAGCATGAGTGGATATTTTTGGTTCATGAGTTTCTTCTTTTTC
rJMFF025A18+ AAGAGGGGTCTTCTGTAAAGCATGAGTGGATATTTTTGGTTCATGAGTTTCTTCTTTTTC
rJMFF020C10+ AAGAGGGGTCTTCTGTAAAGCATGAGTGGATATTTTTGGTTCATGAGTTTCTTCTTTTTC
rJMFF002G03+ AAGAGGGGTCTTCTGTAAAGCATGAGTGGATATTTTTGGTTCATGAGTTTCTTCTTTTTC
rJMFF041O09+ AAGAGGGGTCTTCTGTAAAGCATGAGTGGATATTTTTGGTTCATGAGTTTCTTCTTTTTC
                      ____________________________________________________________
consensus AAGAGGGGTCTTCTGTAAAGCATGAGTGGATATTTTTGGTTCATGAGTTTCTTCTTTTTC
 
. : . : . : . : . : . :
rJMSF040K13+ CCCGATTTTATTTCTTTTTGACTTGTGGTATATCCAACCATCATTGAAACGCATTTATCT
rJMFF025A18+ CCCGATTTTATTTCTTTTTGACTTGTGGTATATCCAACCATCATTGAAACGCATTTATCT
rJMFF020C10+ CCCGATTTTATTTCTTTTTGACTTGTGGTATATCCAACCATCATTGAAACGCATTTATCT
rJMFF002G03+ CCCGATTTTATTTCTTTTTGACTTGTGGTATATCCAACCATCATTGAAACGCATTTATCT
rJMFF041O09+ CCCGATTTTATTTCTTTTTGACTTGTGGTATATCCAACCATCATTGAAACGCATTTATCT
                      ____________________________________________________________
consensus CCCGATTTTATTTCTTTTTGACTTGTGGTATATCCAACCATCATTGAAACGCATTTATCT
 
. : . : . : . : . : . :
rJMSF040K13+ GTTAACAACGTAGATAAATACAAGGCGGCTGTGCTGTTTTCTAGCATTCTTTAAAAGCCT
rJMFF025A18+ GTTAACAACGTAGATAAATACAAGGCGGCTGTGCTGTTTTCTAGCATTCTTTAAAAGCCT
rJMFF020C10+ GTTAACAACGTAGATAAATACAAGGCGGCTGTGCTGTTTTCTAGCATTCTTTAAAAGCCT
rJMFF002G03+ GTTAACAACGTAGATAAATACAAGGCGGCTGTGCTGTTTTCTAGCATTCTTTAAAAGCCT
rJMFF041O09+ GTTAACAACGTAGATAAATACAAGGCGGCTGTGCTGTTTTCTAGCATTCTTTAAAAGCCT
                      ____________________________________________________________
consensus GTTAACAACGTAGATAAATACAAGGCGGCTGTGCTGTTTTCTAGCATTCTTTAAAAGCCT
 
. : . : . : . : . : . :
rJMSF040K13+ GAAGTGTTTGGTTTTCATAGTGCTTCGACTGTCTACCCTGCTCCCAATCAATGTCCTCTC
rJMFF025A18+ GAAGTGTTTGGTTTTCATAGTGCTTCGACTGTCTACCCTGCTCCCAATCAATGTCCTCTC
rJMFF020C10+ GAAGTGTTTGGTTTTCATAGTGCTTCGACTGTCTACCCTGCTCCCAATCAATGTCCTCTC
rJMFF002G03+ GAAGTGTTTGGTTTTCATAGTGCTTCGACTGTCTACCCTGCTCCCAATCAATGTCCTCTC
rJMFF041O09+ GAAGTGTTTGGTTTTCATAGTGCTTCGACTGTCTACCCTGCTCCCAATCAATGTCCTCTC
                      ____________________________________________________________
consensus GAAGTGTTTGGTTTTCATAGTGCTTCGACTGTCTACCCTGCTCCCAATCAATGTCCTCTC
 
. : . : . : . : . : . :
rJMSF040K13+ CAGGGGCATTGGTAGCATGCAATTTATTTCGTCCCCCGTTGTAAACAATGACT
rJMFF025A18+ CAGGGGCATTGGTAGCATGCAATTTATTTCGTCCCCCGTTGTAAACAATGACTTGCGTTT
rJMFF020C10+ CAGGGGCATTGGTAGCATGCAATTTATTTCGTCCCCCGTTGTAAACAATGACTTGCGTTT
rJMFF002G03+ CAGGGGCATTGGTAGCATGCAATTTATTTCGTCCCCCGTTGTAAACAATGACTTGCGTTT
rJMFF041O09+ CAGGGGCATTGGTAGCATGCAATTTATTTCGTCCCCCGTTGTAAACAATGACTTGCGTTT
                      ____________________________________________________________
consensus CAGGGGCATTGGTAGCATGCAATTTATTTCGTCCCCCGTTGTAAACAATGACTTGCGTTT
 
. : . : . : . : . : . :
rJMFF025A18+ TTATTAGCTTCCAATAA
rJMFF020C10+ TTATTAGCTTCCAATAA
rJMFF002G03+ TTATTAGCTTCCAATAA
rJMFF041O09+ TTATTAGCTTCCAATAATGAAAAGAACAGCTTTGTGGAGTAAAAAAAAAAGAAAAAAAAG
                      ____________________________________________________________
consensus TTATTAGCTTCCAATAATGAAAAGAACAGCTTTGTGGAGTAAAAAAAAAAGAAAAAAAAG