| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020A08 | Sequence | 597 | 003148 (3) | ref|XP_004230720.1| | 167 | PREDICTED: uncharacterized protein LOC101246672 [Solanum lycopersicum] | 755 | 013792 (3) | ref|XP_004230720.1| | 331 | PREDICTED: uncharacterized protein LOC101246672 [Solanum lycopersicum] |
| JMFF041H04 | Sequence | 657 | 003148 (3) | ref|XP_009772043.1| | 190 | PREDICTED: uncharacterized protein LOC104222508 [Nicotiana sylvestris] | 612 | 013792 (3) | ref|XP_009772043.1| | 257 | PREDICTED: uncharacterized protein LOC104222508 [Nicotiana sylvestris] |
| JMSF016N05 | Sequence | 494 | 003148 (3) | ref|XP_006346337.1| | 98.6 | PREDICTED: uncharacterized protein LOC102595644 [Solanum tuberosum] | 781 | 013792 (3) | ref|XP_004230720.1| | 334 | PREDICTED: uncharacterized protein LOC101246672 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF016N05+ ACCTGAAGATTCAATNTGAAGGAGANGACACGCAGCTTATCAGAAATG
____________________________________________________________
consensus ACCTGAAGATTCAATNTGAAGGAGANGACACGCAGCTTATCAGAAATG
. : . : . : . : . : . :
rJMSF016N05+ AATTTGAAAAAAATCCAAGGCAACAAAGTTTGCCCATGTCTGAGAAAAAGAGTGATACAA
rJMFF020A08+ CCAAGGCAACAAAGTTTGCCCATGTCTGAGAAAAAGAGTGATACAA
____________________________________________________________
consensus AATTTGAAAAAAATCCAAGGCAACAAAGTTTGCCCATGTCTGAGAAAAAGAGTGATACAA
. : . : . : . : . : . :
rJMSF016N05+ AATTTGATATTCCAGATTTTGGTAAAATGAGTCCAGAAGCTCAACAGTATATATGGAGTT
rJMFF020A08+ AATTTGATATTCCAGATTTTGGTAAAATGAGTCCAGAAGCTCAACAGTATATATGGAGTT
____________________________________________________________
consensus AATTTGATATTCCAGATTTTGGTAAAATGAGTCCAGAAGCTCAACAGTATATATGGAGTT
. : . : . : . : . : . :
rJMSF016N05+ TACAGACGCGTTTAGCTTCTATCAAAAAGGAGCTTCGTGAAGTCAAGAGGAAAAGTGCTG
rJMFF020A08+ TACAGACGCGTTTAGCTTCTATCAAAAAGGAGCTTCGTGAAGTCAAGAGGAAAAGTGCTG
rJMFF041H04+ GGAAAAGTGCTG
____________________________________________________________
consensus TACAGACGCGTTTAGCTTCTATCAAAAAGGAGCTTCGTGAAGTCAAGAGGAAAAGTGCTG
. : . : . : . : . : . :
rJMSF016N05+ CTCTTCAGATGCAACAATTTGTCGGTGAGGAGAAGAATGATTTATTGGACTATCTAAGAT
rJMFF020A08+ CTCTTCAGATGCAACAATTTGTCGGTGAGGAGAAGAATGATTTATTGGACTATCTAAGAT
rJMFF041H04+ CTCTTCAGATGCAACAATTTGTCGGTGAGGAGAAGAATGATTTATTGGACTATCTAAGAT
____________________________________________________________
consensus CTCTTCAGATGCAACAATTTGTCGGTGAGGAGAAGAATGATTTATTGGACTATCTAAGAT
. : . : . : . : . : . :
rJMSF016N05+ CATTGCAACCTGAGAAGGTTGCAGAGCTTTCAGAACCGACATCGCTTGAAGTGAAGGAAG
rJMFF020A08+ CATTGCAACCTGAGAAGGTTGCAGAGCTTTCAGAACCGACATCGCTTGAAGTGAAGGAAG
rJMFF041H04+ CATTGCAACCTGAGAAGGTTGCAGTGCTTTCAGAACCGACATCGCTTGAAGTGAAGGAAG
____________________________________________________________
consensus CATTGCAACCTGAGAAGGTTGCAGAGCTTTCAGAACCGACATCGCTTGAAGTGAAGGAAG
. : . : . : . : . : . :
rJMSF016N05+ CCATCCATTCTGTAGTCCATGGCCTGTTGGCCACACTTTCCCCTAGAATGCATTCAAAGG
rJMFF020A08+ CCATCCATTCTGTAGTCCATGGCCTGTTGGCCACACTTTCCCCTAGAATGCATTCAAAGG
rJMFF041H04+ CCATCCATTCTGTAGTCCATGGCCTGTTGGCCACACTTTCCCCTAGAATGCATTCAAAGG
____________________________________________________________
consensus CCATCCATTCTGTAGTCCATGGCCTGTTGGCCACACTTTCCCCTAGAATGCATTCAAAGG
. : . : . : . : . : . :
rJMSF016N05+ CCCCTGATTTGGCAGACAACACCTCTGCTGGTACTGTAAATATTGGAGCCGAAGATTGCA
rJMFF020A08+ CCCCTGATTTGGCAGACAACACCTCTGCTGGTACTGTAAATATTGGAGCCGAAGATTGCA
rJMFF041H04+ CCCCTGATTTGGCAGACAACACCTCTGCTGGTACTGTAAATATTGGAGCCGAAGATTGCA
____________________________________________________________
consensus CCCCTGATTTGGCAGACAACACCTCTGCTGGTACTGTAAATATTGGAGCCGAAGATTGCA
. : . : . : . : . : . :
rJMSF016N05+ TTGATCTCGTTGAAAATACTTCCCTTCAATTCCAGCCCATGATTTCATTAACTCGGGATT
rJMFF020A08+ TTGATCTCGTTGAAAATACTTCCCTTCAATTCCAGCCCATGATTTCATTAACTCGGGATT
rJMFF041H04+ TTGATCTCGTTGAAAATACTTCCCTTCAATTCCAGCCCATGATTTCATTAACTCGGGATT
____________________________________________________________
consensus TTGATCTCGTTGAAAATACTTCCCTTCAATTCCAGCCCATGATTTCATTAACTCGGGATT
. : . : . : . : . : . :
rJMSF016N05+ ATCTTGCACGCCTGCTGTTCTGGTGCATGCTACTGGGGCACTACATAAGAGGTCTTGAAT
rJMFF020A08+ ATCTTGCACGCCTGCTGTTCTGGTGCATGCTACTGGGGCACTACATAAGAGGTCTTGAAT
rJMFF041H04+ ATCTTGCACGCCTGCTGTTCTGGTGCATGCTACTGGGGCACTACATAAGAGGTCTTGAAT
____________________________________________________________
consensus ATCTTGCACGCCTGCTGTTCTGGTGCATGCTACTGGGGCACTACATAAGAGGTCTTGAAT
. : . : . : . : . : . :
rJMSF016N05+ ATCGCCTAGAGCTTACGGAACTTCTGTCACTGCCATATGGAATACAGAAAGATGGCTCTA
rJMFF020A08+ ATCGCCTAGAGCTTACGGAACTTCTGTCACTGCCATATGGAATACAGAAAGATGGCTCTA
rJMFF041H04+ ATCGCCTAGAGCTTACGGAACTTCTGTCACTGCCATATGGAATACAGAAAGATGGCTCTA
____________________________________________________________
consensus ATCGCCTAGAGCTTACGGAACTTCTGTCACTGCCATATGGAATACAGAAAGATGGCTCTA
. : . : . : . : . : . :
rJMSF016N05+ GCATTGATCAAGTTGACTGAGAAATTTAGTCGTTTTAGACAGTGCAGACTGTAGATAAAT
rJMFF020A08+ GCATTGATCAAGTTGACTGAGAAATTTAGTCGTTTTAGACAGTGCAGACTGTAGATAAAT
rJMFF041H04+ GCATTGATCAAGTTGACTGAGAAATTTAGTCGTTTTAGACAGTGCAGACTGTAGATAAAT
____________________________________________________________
consensus GCATTGATCAAGTTGACTGAGAAATTTAGTCGTTTTAGACAGTGCAGACTGTAGATAAAT
. : . : . : . : . : . :
rJMSF016N05+ AGTTTGTTACATTGCTTTGGATACTACTTATCTGTAATGGAATATGGCTATGGCCTCTCA
rJMFF020A08+ AGTTTGTTACATTGCTTTGGATACTACTTATCTGTAATGGAATATGGCTATGGCCTCTCA
rJMFF041H04+ AGTTTGTTACATTGCTTTGGATACTACTTATCTGTAATGGAATATGGCTATGGCCTCTCA
____________________________________________________________
consensus AGTTTGTTACATTGCTTTGGATACTACTTATCTGTAATGGAATATGGCTATGGCCTCTCA
. : . : . : . : . : . :
rJMSF016N05+ AACAGCTAATCTT
rJMFF020A08+ AACAGCTAATCTTTGTAGGTTTTCTCTGCTAAACACTTCAAATACAAAT
rJMFF041H04+ AACAGCTAATCTTTGTAGGTTTTCTCTGCTAAACACTTCAAATACAAATTACAATTTGAC
____________________________________________________________
consensus AACAGCTAATCTTTGTAGGTTTTCTCTGCTAAACACTTCAAATACAAATTACAATTTGAC