Contig 013791:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050N02+                                                             GGAAAATGC
                      ____________________________________________________________
consensus                                                                GGAAAATGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050N02+          TGTGGGTAAGGCTGTTCAAGCTGATGTCATTCCTGTGCTTGAGAAAATACAAAAGAAGAA
                      ____________________________________________________________
consensus             TGTGGGTAAGGCTGTTCAAGCTGATGTCATTCCTGTGCTTGAGAAAATACAAAAGAAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050N02+          AGACAGGGCTCTGAAACGAAAAAGGAGTCAGGATACGGTTCTTTACAGTTTTAGACCGTC
                      ____________________________________________________________
consensus             AGACAGGGCTCTGAAACGAAAAAGGAGTCAGGATACGGTTCTTTACAGTTTTAGACCGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050N02+          TGCTGTTACTCGTTCCTGCCGAAATCGTGGGCATATCAATTATACATTTGATGATTATGA
                      ____________________________________________________________
consensus             TGCTGTTACTCGTTCCTGCCGAAATCGTGGGCATATCAATTATACATTTGATGATTATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050N02+          TAGAGCCATTAATGAGGCCATAGAAGTAACAAACAATAAGAGGACTACCAAAGAGCAAAG
rJMFF041C10+                                                AGAGGACTACCAAAGAGCAAAG
                      ____________________________________________________________
consensus             TAGAGCCATTAATGAGGCCATAGAAGTAACAAACAATAAGAGGACTACCAAAGAGCAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050N02+          CCACACAAAACAAAATAGCGAGCATGGCACCGTTAATGGAACTGTCGATGACCACGAGGA
rJMFF041C10+          CCACACAAAA--AAATAGCGAGCATGGCACCGTTAATGGAACTGTCGATGACCACGAGGA
                      ____________________________________________________________
consensus             CCACACAAAACAAAATAGCGAGCATGGCACCGTTAATGGAACTGTCGATGACCACGAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050N02+          TTCTTTAGCAACTAGCTCAACTGGCGATGAATCCACGAGAAGTGACACAGAGAGTGAGCA
rJMFF041C10+          TTCTTTAGCAACTAGCTCAACTGGCGATGAATCCACGAGAAGTGACACAGAGAGTGAGCA
                      ____________________________________________________________
consensus             TTCTTTAGCAACTAGCTCAACTGGCGATGAATCCACGAGAAGTGACACAGAGAGTGAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050N02+          GCATCCCGGGAGCGATGTTGCTGATGACACGAGTGATGAGAACGATGGGGAAAAGGTTGC
rJMFF041C10+          GCATCCCGGGAGCGATGTTGCTGATGACACGAGTGATGAGAACGATGGGGAAAAGGTTGC
                      ____________________________________________________________
consensus             GCATCCCGGGAGCGATGTTGCTGATGACACGAGTGATGAGAACGATGGGGAAAAGGTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050N02+          TGATGCTAGAGAAGAAGACACGATTACCAAACATGATTACCCGACAGAGGAAAGTTGGTT
rJMFF041C10+          TGATGCTAGAGAAGAAGACACGATTACCAAACATGATTACCCGACAGAGGAAAGTTGGTT
                      ____________________________________________________________
consensus             TGATGCTAGAGAAGAAGACACGATTACCAAACATGATTACCCGACAGAGGAAAGTTGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050N02+          GGAGAACGGGGATAGGGATCCTCACTGCAGCAAGAGAGGTTATATTCTCAGAAGAACTAA
rJMFF041C10+          GGAGAACGGGGATAGGGATCCTCACTGCAGCAAGAGAGGTTATATTCTCAGAAGAACTAA
                      ____________________________________________________________
consensus             GGAGAACGGGGATAGGGATCCTCACTGCAGCAAGAGAGGTTATATTCTCAGAAGAACTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050N02+          TCGAAGTGCAAAGGATAGGTCGATACAGAGGCCTATCCTTACTACTGCTGAGTGCGTGGT
rJMFF041C10+          TCGAAGTGCAAAGGATAGGTCGATACAGAGGCCTATCCTTACTACTGCTGAGTGCGTGGT
                      ____________________________________________________________
consensus             TCGAAGTGCAAAGGATAGGTCGATACAGAGGCCTATCCTTACTACTGCTGAGTGCGTGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050N02+          TGTTCCTGATTCAGAAGACGAGGAATAGATGGTGCTGAAATTGTGATGGTTAACTGAATG
rJMFF041C10+          TGTTCCTGATTCAGAAGACGAGGAATAGATGGTGCTGAAATTGTGATGGTTAACTGAATG
                      ____________________________________________________________
consensus             TGTTCCTGATTCAGAAGACGAGGAATAGATGGTGCTGAAATTGTGATGGTTAACTGAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050N02+          ATGACTGTAGATTAAGGTTGTAGTTTTATTCTCAAGTATGCT                  
rJMFF041C10+          ATGACTGTAGATTAAGGTTGTAGTTTTATTCTCAAGTATGCTTGAATTTCTTCCCCATTT
                      ____________________________________________________________
consensus             ATGACTGTAGATTAAGGTTGTAGTTTTATTCTCAAGTATGCTTGAATTTCTTCCCCATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF041C10+          CTAAAGAAGGGCAACGACTTCATGAATGATTAAGGCGTTTTTGAAAGCATCCAAGTCAAG
                      ____________________________________________________________
consensus             CTAAAGAAGGGCAACGACTTCATGAATGATTAAGGCGTTTTTGAAAGCATCCAAGTCAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF041C10+          ATTGTTTTCTTGTGCTTGTTTCTAATGTAAGAAAGGTTTATTACCTTCAACATTTGGGCT
                      ____________________________________________________________
consensus             ATTGTTTTCTTGTGCTTGTTTCTAATGTAAGAAAGGTTTATTACCTTCAACATTTGGGCT