| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014K13 | Sequence | 653 | 013790 (7) | ref|XP_006347553.1| | 6e-25 | PREDICTED: aluminum-activated malate transporter 4-like [Solanum tuberosum] | |||||
| JMFF033B04 | Sequence | 552 | 013790 (7) | ref|XP_006347553.1| | 2e-23 | PREDICTED: aluminum-activated malate transporter 4-like [Solanum tuberosum] | 765 | 005553 (5) | ref|XP_004235305.1| | 3e-71 | PREDICTED: aluminum-activated malate transporter 4-like [Solanum lycopersicum] |
| JMFF041B21 | Sequence | 654 | 013790 (7) | ref|XP_006347553.1| | 8e-26 | PREDICTED: aluminum-activated malate transporter 4-like [Solanum tuberosum] | 628 | 013790 (7) | ref|XP_006347553.1| | 3e-17 | PREDICTED: aluminum-activated malate transporter 4-like [Solanum tuberosum] |
| JMFF048O11 | Sequence | 578 | 013790 (7) | ref|XP_006347553.1| | 1e-39 | PREDICTED: aluminum-activated malate transporter 4-like [Solanum tuberosum] | 517 | 005553 (5) | ref|XP_011084602.1| | 1e-29 | PREDICTED: aluminum-activated malate transporter 4-like isoform X1 [Sesamum ind |
| JMFS066G05 | Sequence | 627 | 013790 (7) | ref|XP_006347553.1| | 6e-31 | PREDICTED: aluminum-activated malate transporter 4-like [Solanum tuberosum] | |||||
| JMSF048G18 | Sequence | 692 | 013790 (7) | ref|XP_009795348.1| | 6e-65 | PREDICTED: aluminum-activated malate transporter 4-like [Nicotiana sylvestris] | 742 | 005553 (5) | ref|XP_004235305.1| | 7e-72 | PREDICTED: aluminum-activated malate transporter 4-like [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMSF048G18+ GTCAACANGAACACCCTGAATCCATATTCGTATT
____________________________________________________________
consensus GTCAACANGAACACCCTGAATCCATATTCGTATT
. : . : . : . : . : . :
JMFF048O11+ GTAAGATGCTAGAAAACCTGCCACAAAGATGCTGA
JMSF048G18+ GCTTCATGGTAGGGTACAGTTTAAAGTAAGATGCTAGAAAACCTGCCACAAAGATGCTGA
____________________________________________________________
consensus GCTTCATGGTAGGGTACAGTTTAAAGTAAGATGCTAGAAAACCTGCCACAAAGATGCTGA
. : . : . : . : . : . :
JMFF048O11+ TAGTAATTACTACTTCTTGCCATTTGCCAGCCAGGAAAGATAGTTCAGCAATTGCCAAAG
JMSF048G18+ TAGTAATTACTACTTCTTGCCATTTGCCAGCCAGGAAAGATAGTTCAGCAATTGCCAAAG
____________________________________________________________
consensus TAGTAATTACTACTTCTTGCCATTTGCCAGCCAGGAAAGATAGTTCAGCAATTGCCAAAG
. : . : . : . : . : . :
JMFF048O11+ ATAATCCACCAGCAGAAAAAGTCCCAAGAGCCCTATTAAATCCTTTACTAAGAGTTGCCC
JMSF048G18+ ATAATCCACCAGCAGAAAAAGTCCCAAGAGCCCTATTAAATCCTTTACTAAGAGTTGCCC
JMFS066G05+ C
JMFF041B21- C
____________________________________________________________
consensus ATAATCCACCAGCAGAAAAAGTCCCAAGAGCCCTATTAAATCCTTTACTAAGAGTTGCCC
. : . : . : . : . : . :
JMFF048O11+ CTATGCTGAATTCGAAGACGACA--AACAGTGAGAATCGCCCAAACCGATTTAGACCCAA
JMSF048G18+ CTATGCTGAATTCGAAGACGACAACAACAGTGAGAATCGCCCAAACCGATTTAGACCCAA
JMFF033B04+ TTCGAAGACGACAACAACAGTGAGAATCGCCCAAACCGATTTAGACCCAA
JMFS066G05+ CTATGCTGAATTCGAAGACGACAACAACAGTGAGAATCGCCCAAACCGATTTAGACCCAA
JMFF041B21- CTATGCTGAATTCGAAGACGACAACAACAGTGAGAATCGCCCAAACCGATTTAGACCCAA
rJMFF014K13+ TATGCTGAATTCGAAGACGACAACAACAGTGAGAATCGCCCAAACCGATTTAGACCCAA
rJMFF041B21+ AGAATCGCCCAAACCGATTTAGACCCAA
____________________________________________________________
consensus CTATGCTGAATTCGAAGACGACAACAACAGTGAGAATCGCCCAAACCGATTTAGACCCAA
. : . : . : . : . : . :
JMFF048O11+ TGTAGCTAAGGGGTTCCTTGAAGAAAACGAGCAGAGAAACAAGCGAGAGAGCCAGCCCCA
JMSF048G18+ TGTAGCTAAGGGGTTCCTTGAAGAAAACGAGCAGAGAAACAAGCGAGAGAGCCAGCCCCA
JMFF033B04+ TGTAGCTAAGGGGTTCCTTGAAGAAAACGAGCAGAGAAACAAGCGAGAGAGCCAGCCCCA
JMFS066G05+ TGTAGCTAAGGGGTTCCTTGAAGAAAACGAGCAGAGAAACAAGCGAGAGAGCCAGCCCCA
JMFF041B21- TGTAGCTAAGGGGTTCCTTGAAGAAAACGAGCAGAGAAACAAGCGAGAGAGCCAGCCCCA
rJMFF014K13+ TGTAGCTAAGGGGTTCCTTGAAGAAAACGAGCAGAGAAACAAGCGAGAGAGCCAGCCCCA
rJMFF041B21+ TGTAGCTAAGGGGTTCCTTGAAGAAAACGAGCAGAGAAACAAGCGAGAGAGCCAGCCCCA
____________________________________________________________
consensus TGTAGCTAAGGGGTTCCTTGAAGAAAACGAGCAGAGAAACAAGCGAGAGAGCCAGCCCCA
. : . : . : . : . : . :
JMFF048O11+ TTTTAGCTGCAAATATGATTTTGCGGGGATCCTTGCGCCCCATCTCATACGCCTTGATCG
JMSF048G18+ TTTTAGCTGCAAATATGATTTTGCGGGGATCCTTGCGTCCCATCTCATACGCCTTGATCG
JMFF033B04+ TTTTAGCTGCAAATATGATTTTGCGGGGATCCTTGCGCCCCATCTCATACGCCTTGATCG
JMFS066G05+ TTTTAGCTGCAAATATGATTTTGCGGGGATCCTTGCGCCCCATCTCATACGCCTTGATCG
JMFF041B21- TTTTAGCTGCAAATATGATTTTGCGGGGATCCTTGCGCCCCATCTCATACGCCTTGATCG
rJMFF014K13+ TTTTAGCTGCAAATATGATTTTGCGGGGATCCTTGCGCCCCATCTCATACGCCTTGATCG
rJMFF041B21+ TTTTAGCTGCAAATATGATTNTGCGGGGATCCTTGCGCCCCATCTCATACGCCTTGATCG
____________________________________________________________
consensus TTTTAGCTGCAAATATGATTTTGCGGGGATCCTTGCGCCCCATCTCATACGCCTTGATCG
. : . : . : . : . : . :
JMFF048O11+ AAGTCTCCTTAACATCTCCGAAGAACGCCGACACTCTGTCGCGAAAACCGTGGAGAAAAC
JMSF048G18+ AAGTCTCCTTAACATCTCCGAAGAACGCCGACACTCTGTCGCGAAAACCGTGGAGAAAAC
JMFF033B04+ AAGTCTCCTTAACATCTCCGAAGAACGCCGACACTCTGTCGCGAAAACCGTGGAGAAAAC
JMFS066G05+ AAGTCTCCTTAACATCTCCGAAGAACGCCGACACTCTGTCGCGAAAACCGTGGAGAAAAC
JMFF041B21- AAGTCTCCTTAACATCTCCGAAGAACGCCGACACTCTGTCGCGAAAACCGTGGAGAAAAC
rJMFF014K13+ AAGTCTCCTTAACATCTCCGAAGAACGCCGACACTCTGTCGCGAAAACCGTGGAGAAAAC
rJMFF041B21+ AAGTCTCCTTAACATCTCCGAAGAACGCCGACACTCTGTCGCGAAAACCGTGGAGAAAAC
____________________________________________________________
consensus AAGTCTCCTTAACATCTCCGAAGAACGCCGACACTCTGTCGCGAAAACCGTGGAGAAAAC
. : . : . : . : . : . :
JMFF048O11+ CTCGGTTTGTAGACTGAGACGGAATCCCCCATTCCAATTCTGAAGAACACCCACCTCTGG
JMSF048G18+ CTCGGTTTGTAGACTGAGACGGAATCCCCCATTCCAATTCTGAAGAACACCCACCTCTGG
JMFF033B04+ CTCGGTTTGTAGACTGAGACGGAATCCCCCATTCCAATTCTGAAGAACACCCACCTCTGG
JMFS066G05+ CTCGGTTTGTAGACTGAGACGGAATCCCCCATTCCAATTCTGAAGAACACCCACCTCTGG
JMFF041B21- CTCGGTTTGTAGACTGAGACGGAATCCCCCATTCCAATTCTGAAGAACACCCACCTCTGG
rJMFF014K13+ CTCGGTTTGTAGACTGAGACGGAATCCCCCATTCCAATTCTGAAGAACACCCACCTCTGG
rJMFF041B21+ CTCGGTTTGTAGACTGAGACGGAATCCCCCATTCCAATTCTGAAGAACACCCACCTCTGG
____________________________________________________________
consensus CTCGGTTTGTAGACTGAGACGGAATCCCCCATTCCAATTCTGAAGAACACCCACCTCTGG
. : . : . : . : . : . :
JMFF048O11+ ATAGCAGTCCTTCTCTGCTTGCTCCCATAAAGCTCCGCCTCAAGGATTCAGAATAAGCGT
JMSF048G18+ ATAGCAGTCCTTCTCTGCTTGCTCCCATAAAGCTCCGCCTCAAGGATTCAGAATAAGCGT
JMFF033B04+ ATAGCAGTCCTTCTCTGCTTGCTCCCATAAAGCTCCGCCTCAAGGATTCAGAATAAGCGT
JMFS066G05+ ATAGCAGTCCTTCTCTGCTTGCTCCCATAAAGCTCCGCCTCAAGGATTCAGAATAAGCGT
JMFF041B21- ATAGCAGTCCTTCTCTGCTTGCTCCCATAAAGCTCCGCCTCAAGGATTCAGAATAAGCGT
rJMFF014K13+ ATAGCAGTCCTTCTCTGCTTGCTCCCATAAAGCTCCGCCTCAAGGATTCAGAATAAGCGT
rJMFF041B21+ ATAGCAGTCCTTCTCTGCTTGCTCCCATAAAGCTCCGCCTCAAGGATTCAGAATAAGCGT
____________________________________________________________
consensus ATAGCAGTCCTTCTCTGCTTGCTCCCATAAAGCTCCGCCTCAAGGATTCAGAATAAGCGT
. : . : . : . : . : . :
JMFF048O11+ TGCCTGCTGCCATACTTTATCCTCGGAAACGAAACGCTTTCGTCCTGTCTGAAATCTGGT
JMSF048G18+ TGCCTGCTGCCATACTTTATCCTCGGAAACGAAACGCTTTCGTCCTGTCTGAAATCTGGT
JMFF033B04+ TGCCTGCTGCCATACTTTATCCTCGGAAACGAAACGCTTTCGTCCTGTCTGAAATCTGGT
JMFS066G05+ TGCCTGCTGCCATACTTTATCCTCGGAAACGAAACGCTTTCGTCCTGTCTGAAATCTGGT
JMFF041B21- TGCCTGCTGCCATACTTTATCCTCGGAAACGAAACGCTTTCGTCCTGTCTGAAATCTGGT
rJMFF014K13+ TGCCTGCTGCCATACTTTATCCTCGGAAACGAAACGCTTTCGTCCTGTCTGAAATCTGGT
rJMFF041B21+ TGCCTGCTGCCATACTTTATCCTCGGAAACGAAACGCTTTCGTCCTGTCTGAAATCTGGT
____________________________________________________________
consensus TGCCTGCTGCCATACTTTATCCTCGGAAACGAAACGCTTTCGTCCTGTCTGAAATCTGGT
. : . : . : . : . : . :
JMFF048O11+ TTCAT
JMSF048G18+ TTCATGGAGTAGAAGGGATTAAAGTTTTGGTATCAAATTATAATTATTGAAGTGTT
JMFF033B04+ TTCATGGAGTAGAAGGGATTAAAGTTTTGGTATCAAATTATAATTATTGAAGTGTTTGAT
JMFS066G05+ TTCATGGAGTAGAAGGGATTAAAGTTTTGGTATCAAATTATAATTATTGAAGTGTTTGAT
JMFF041B21- TTCATGGAGTAGAAGGGATTAAAGTTTTGGTATCAAATTATAATTATTGAAGTGTTTGAT
rJMFF014K13+ TTCATGGAGTAGAAGGGATTAAAGTTTTGGTATCAAATTATAATTATTGAAGTGTTTGAT
rJMFF041B21+ TTCATGGAGTAGAAGGGATTAAAGTTTTGGTATCAAATTATAATTATTGAAGTGTTTGAT
____________________________________________________________
consensus TTCATGGAGTAGAAGGGATTAAAGTTTTGGTATCAAATTATAATTATTGAAGTGTTTGAT
. : . : . : . : . : . :
JMFF033B04+ AATTTGATTCAGAGGTGGCGAATTTTGAAAAGAACAGGCCAGCAACTGATTGACTGGTTG
JMFS066G05+ AATTTGATTCAGAGGTGGCGAATTTTGAAAAGAACAGGCCAGCAACTGATTGACTGGTTG
JMFF041B21- AATTTGATTCAGAGGTGGCGAATTTTGAAAAGAACAAGCCAGCAACTGATTGACTGGTTG
rJMFF014K13+ AATTTGATTCAGAGGTGGCGAATTTTGAAAAGAACAAGCCAGCAACTGATTGACTGGTTG
rJMFF041B21+ AATTTGATTCAGAGGTGGCGAATTTTGAAAAGAACAAGCCAGCAACTGATTGACTGGTTG
____________________________________________________________
consensus AATTTGATTCAGAGGTGGCGAATTTTGAAAAGAACAAGCCAGCAACTGATTGACTGGTTG
. : . : . : . : . : . :
JMFF033B04+ GGGTTTTTGTCGTGCCGACCAT
JMFS066G05+ GGGTTTTTGTCGTGCCGACCATGATCAAGAATTAAGGTCAAACATGCCCATTTGTACGTT
JMFF041B21- GGGTTTTTGTCGTGCCGACCATGATCAAGAATTAAGGTCAAACATGCCCATTTGTACGTT
rJMFF014K13+ GGGTTTTTGTCGTGCCGACCATGATCAAGAATTAAGGTCAAACATGCCCATTTGTACGTT
rJMFF041B21+ GGGTTTTTGTCGTGCCGACCATGATCAAGAATTAAGGTCAAACATGCCCATTTGTACGTT
____________________________________________________________
consensus GGGTTTTTGTCGTGCCGACCATGATCAAGAATTAAGGTCAAACATGCCCATTTGTACGTT
. : . : . : . : . : . :
JMFS066G05+ C
JMFF041B21- C
rJMFF014K13+ CTAACAATCCATGTTTAGAGGTTAAGGTAATCACAGATATCATATGACAAAACA
rJMFF041B21+ CTAACAATCCATGTTTAGAGGTTAAGGTAATCACAGATATCATATGACAAAACAGTCTCA
____________________________________________________________
consensus CTAACAATCCATGTTTAGAGGTTAAGGTAATCACAGATATCATATGACAAAACAGTCTCA