clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF012A21 | Sequence | 581 | 011616 (6) | ref|XP_006350186.1| | 2e-79 | PREDICTED: serine carboxypeptidase-like 18-like isoform X2 [Solanum tuberosum] | 785 | 013785 (6) | gb|AAF64227.1|AF248647_1 | 8e-84 | glucose acyltransferase [Solanum pennellii] |
JMFF020E20 | Sequence | 586 | 011616 (6) | ref|XP_006350186.1| | 1e-79 | PREDICTED: serine carboxypeptidase-like 18-like isoform X2 [Solanum tuberosum] | 682 | 013785 (6) | gb|AAF64227.1|AF248647_1 | 5e-69 | glucose acyltransferase [Solanum pennellii] |
JMFF039P04 | Sequence | 652 | 011616 (6) | ref|XP_006350186.1| | 6e-91 | PREDICTED: serine carboxypeptidase-like 18-like isoform X2 [Solanum tuberosum] | 738 | 013785 (6) | gb|AAF64227.1|AF248647_1 | 8e-69 | glucose acyltransferase [Solanum pennellii] |
JMFF043M12 | Sequence | 653 | 011616 (6) | ref|XP_006350186.1| | 6e-91 | PREDICTED: serine carboxypeptidase-like 18-like isoform X2 [Solanum tuberosum] | 338 | 013785 (6) | ref|XP_008236457.1| | 9e-12 | PREDICTED: putative serine carboxypeptidase-like 52 [Prunus mume] |
JMSF053C17 | Sequence | 678 | 013785 (6) | ref|XP_009614133.1| | 5e-58 | PREDICTED: serine carboxypeptidase-like 18 isoform X2 [Nicotiana tomentosiformi | 912 | 013785 (6) | ref|XP_009795831.1| | 8e-116 | PREDICTED: serine carboxypeptidase-like 18 isoform X2 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF053C17- GG
____________________________________________________________
consensus GG
. : . : . : . : . : . :
JMSF053C17- GGCTAGCTGGATAAGCCTTTGTCGTCATGGCCTCAACATTCAAAATCCTTGCGTCGACGT
____________________________________________________________
consensus GGCTAGCTGGATAAGCCTTTGTCGTCATGGCCTCAACATTCAAAATCCTTGCGTCGACGT
. : . : . : . : . : . :
JMSF053C17- TTCTGCTACTGTTTTTGGCTCCAACGTTTTTACATGCGGTGGTTGAAACTCTGCCTGGTT
____________________________________________________________
consensus TTCTGCTACTGTTTTTGGCTCCAACGTTTTTACATGCGGTGGTTGAAACTCTGCCTGGTT
. : . : . : . : . : . :
JMSF053C17- TCCCAGCAAAACTTCCATTCAAACTCCATACTGGTTACATAGGTGTGGGAGAATCTCAAA
____________________________________________________________
consensus TCCCAGCAAAACTTCCATTCAAACTCCATACTGGTTACATAGGTGTGGGAGAATCTCAAA
. : . : . : . : . : . :
JMSF053C17- ATTCAACTGTTTTACTATTTCATTGAATCTGAGAAGAGCCCAGAAACTGATCCACTCTTG
____________________________________________________________
consensus ATTCAACTGTTTTACTATTTCATTGAATCTGAGAAGAGCCCAGAAACTGATCCACTCTTG
. : . : . : . : . : . :
JMSF053C17- CTATGGCTCACTGGTGGTCCAGGTCCTTTGACCATTAACTATGCAAATTCCACTGGGGAC
____________________________________________________________
consensus CTATGGCTCACTGGTGGTCCAGGTCCTTTGACCATTAACTATGCAAATTCCACTGGGGAC
. : . : . : . : . : . :
JMSF053C17- ATCCCAGATTTGGAGTTGAACCCCTATGCATGGACCAAGGTGGCCAACATCATATTTGTG
____________________________________________________________
consensus ATCCCAGATTTGGAGTTGAACCCCTATGCATGGACCAAGGTGGCCAACATCATATTTGTG
. : . : . : . : . : . :
JMSF053C17- GATCAACCAGTTGGAACTGGATATTCCTATTCAGAAACATCAGATGCTTACAACACTAAT
____________________________________________________________
consensus GATCAACCAGTTGGAACTGGATATTCCTATTCAGAAACATCAGATGCTTACAACACTAAT
. : . : . : . : . : . :
JMSF053C17- GATACTTTATCTGCACAACATACTTATAGTTTCCTCGTACAGTGGCTCCTGGACCATCCT
____________________________________________________________
consensus GATACTTTATCTGCACAACATACTTATAGTTTCCTCGTACAGTGGCTCCTGGACCATCCT
. : . : . : . : . : . :
JMSF053C17- ACATTCCTTAACAATCCACTCTATGTTGCTGGAGATTCCTATTCTGGAATCACTGTTCCA
rJMSF053C17+ TGGAGATTCCTATTCTGGAATCACTGTTCCA
____________________________________________________________
consensus ACATTCCTTAACAATCCACTCTATGTTGCTGGAGATTCCTATTCTGGAATCACTGTTCCA
. : . : . : . : . : . :
JMSF053C17- CTCGTCGTTCGCAATATATATGATGGTTTAGAATCTGGAATTGAGCCGCGACTAAATATG
rJMSF053C17+ CTCGTCGTTCGCAATATATATGATGGTTTAGAATCTGGAATTGAGCCGCGACTAAATATG
____________________________________________________________
consensus CTCGTCGTTCGCAATATATATGATGGTTTAGAATCTGGAATTGAGCCGCGACTAAATATG
. : . : . : . : . : . :
JMSF053C17- AAAGGGTGTATAGAAGGCAATCCATTGACTCACCGATTCTCAGACACTAATAATAGAGTG
rJMSF053C17+ AAAGGGTGTATAGAAGGCAATCCATTGACTCACCGATTCTCAGACACTAATAATAGAGTG
____________________________________________________________
consensus AAAGGGTGTATAGAAGGCAATCCATTGACTCACCGATTCTCAGACACTAATAATAGAGTG
. : . : . : . : . : . :
JMSF053C17- GTGTATGGCTATCGAA
rJMSF053C17+ GTGTATGGCTATCGAATGGGGTTTTTATCAGACAATCTGTACAAGTCCACGAAAGAAAGT
rJMFF012A21+ CAAGTCCACGAAAGAAAGT
____________________________________________________________
consensus GTGTATGGCTATCGAATGGGGTTTTTATCAGACAATCTGTACAAGTCCACGAAAGAAAGT
. : . : . : . : . : . :
rJMSF053C17+ TGCAATGGAAATTACATAGATGCGCTTCCACACAATTCAGCGTGTCAATATGACCTTCAA
rJMFF012A21+ TGCAATGGAAATTACATAGATGCGCTTCCACACAATTCAGCGTGTCAATATGACNTTCAA
____________________________________________________________
consensus TGCAATGGAAATTACATAGATGCGCTTCCACACAATTCAGCGTGTCAATATGACCTTCAA
. : . : . : . : . : . :
rJMSF053C17+ AGAGTAACAAAGTGCACTGAAAAGATTAATATGCCACAAATTCTAGAACCCGCGTGTAAC
rJMFF012A21+ AGAGTAACAAAGTGCACTGAAAAGATTAATATGCCACAAATTCTAGAACCCGCGTGTAAC
____________________________________________________________
consensus AGAGTAACAAAGTGCACTGAAAAGATTAATATGCCACAAATTCTAGAACCCGCGTGTAAC
. : . : . : . : . : . :
rJMSF053C17+ CCGGAAATTTTACTAAGTCTAGATGGTGAAAATCTACCACAACAATGGTGCAGAGACGAT
rJMFF012A21+ CCGGAAATTTTACTAAGTCTAGATGGTGAAAATCTACCACAACAATGGTGCAGAGACGAT
rJMFF039P04+ CAATGGTGCAGAGACGAT
____________________________________________________________
consensus CCGGAAATTTTACTAAGTCTAGATGGTGAAAATCTACCACAACAATGGTGCAGAGACGAT
. : . : . : . : . : . :
rJMSF053C17+ AATTATTTGTTCGCCTACTCCTGGGCAAATAACAAAATTGTGCAGAAAGCACTCGGTGTG
rJMFF012A21+ AATTATTTGTTCGCCTACTCCTGGGCAAATAACAAAATTGTGCAGAAAGCACTCGGTGTG
rJMFF039P04+ AATTATTTGTTCGCCTACTCCTGGGCAAATAACAAAATTGTGCAGAAAGCACTCGGTGTG
____________________________________________________________
consensus AATTATTTGTTCGCCTACTCCTGGGCAAATAACAAAATTGTGCAGAAAGCACTCGGTGTG
. : . : . : . : . : . :
rJMSF053C17+ CGTGAGGGAACTATGACAGAGTGGCTTAGATGCAACCATACCTTGAGTGGTCCACCTGAA
rJMFF012A21+ CGTGAGGGAACTATGACAGAGTGGCTTAGATGCAACCATACCTTGAGTGGTCCACCTGAA
rJMFF039P04+ CGTGAGGGAACTATGACAGAGTGGCTTAGATGCAACCATACCTTGAGTGGTCCACCTGAA
____________________________________________________________
consensus CGTGAGGGAACTATGACAGAGTGGCTTAGATGCAACCATACCTTGAGTGGTCCACCTGAA
. : . : . : . : . : . :
rJMSF053C17+ GCGGAGAGGAGTGAAACATACGTTTTTAATGTGAAAAACACGGTTGATTATCATCGCAGT
rJMFF012A21+ GCGGAGAGGAGTGAAACATACGTTTTTAATGTGAAAAACACGGTTGATTATCATCGCAGT
rJMFF020E20+ GGAGAGGAGTGAAACATACGTTTTTAATGTGAAAAACACGGTTGATTATCATCGCAGT
rJMFF039P04+ GCGGAGAGGAGTGAAACATACGTTTTTAATGTGAAAAACACGGTTGATTATCATCGCAGT
____________________________________________________________
consensus GCGGAGAGGAGTGAAACATACGTTTTTAATGTGAAAAACACGGTTGATTATCATCGCAGT
. : . : . : . : . : . :
rJMSF053C17+ TTCACTAACAAATCTTGTCGAGTTCTAATCTACAGTGGGGACCACGACATGATCGTTCCT
rJMFF012A21+ TTCACTAACAAATCTTGTCGAGTTCTAATCTACAGTGGGGACCACGACATGATCGTTCCT
rJMFF020E20+ TTCACTAACAAATCTTGTCGAGTTCTAATCTACAGTGGGGACCACGACATGATCGTTCCT
rJMFF039P04+ TTCACTAACAAATCTTGTCGAGTTCTAATCTACAGTGGGGACCACGACATGATCGTTCCT
____________________________________________________________
consensus TTCACTAACAAATCTTGTCGAGTTCTAATCTACAGTGGGGACCACGACATGATCGTTCCT
. : . : . : . : . : . :
rJMSF053C17+ CATGTGAGCACAGAAAAATGGATAGAATCCTTGAAAGTTGGTGTTGAAGATGATTGGAGA
rJMFF012A21+ CATGTGAGCACAGAAAAATGGATAGAATCCTTGAAAGTTGGTGTTGAAGATGATTGCAGA
rJMFF020E20+ CATGTGAGCACAGAAAAATGGATAGAATCCTTGAAAGTTGGTGTTGAAGATGATTGGAGA
rJMFF039P04+ CATGTGAGCACAGAAAAATGGATAGAATCCTTGAAAGTTGGTGTTGAAGATGATTGGAGA
____________________________________________________________
consensus CATGTGAGCACAGAAAAATGGATAGAATCCTTGAAAGTTGGTGTTGAAGATGATTGGAGA
. : . : . : . : . : . :
rJMSF053C17+ CCTTGGTTTGTTGAAGATCAAGTTGCAGGATATACCATGAAGTATTCACAGAAGGAGTAT
rJMFF012A21+ CCTTGGTTTGTTGAAGATCAAGTTGCAGGATATACCATGAAGTATTCACAGAAGGAGTAT
rJMFF020E20+ CCTTGGTTTGTTGAAGATCAAGTTGCAGGATATACCATGAAGTATTCACAGAAGGAGTAT
rJMFF043M12+ AGAAGGAGTAT
rJMFF039P04+ CCTTGGTTTGTTGAAGATCAAGTTGCAGGATATACCATGAAGTATTCACAGAAGGAGTAT
____________________________________________________________
consensus CCTTGGTTTGTTGAAGATCAAGTTGCAGGATATACCATGAAGTATTCACAGAAGGAGTAT
. : . : . : . : . : . :
rJMSF053C17+ GAGTTGACATATGCAACTGTAAAGGGAGCAGGTCATACAGCACCAGAATATAAGCCACGA
rJMFF012A21+ GAGTTGACATATGCAACTGTAAAGGGAGCAGGTCATACAGCACCAGAATATAAGCCACGA
rJMFF020E20+ GAGTTGACATATGCAACTGTAAAGGGAGCAGGTCATACAGCACCAGAATATAAGCCACGA
rJMFF043M12+ GAGTTGACATATGCAACTGTAAAGGGAGCAGGTCATACAGCCCCAGAATATAAGCCCCGA
rJMFF039P04+ GAGTTGACATATGCAACTGTAAAGGGAGCAGGTCATACAGCACCAGAATATAAGCCACGA
____________________________________________________________
consensus GAGTTGACATATGCAACTGTAAAGGGAGCAGGTCATACAGCACCAGAATATAAGCCACGA
. : . : . : . : . : . :
rJMSF053C17+ GAATGCCTGCCAATGATTCAAAGATGGCTTAGCATTTATCCTCTTTGATTATTATGTAAA
rJMFF012A21+ GAATGCCTGCCAATGATTCAAAGATGGCTTAGCATTTATCCTCTTTGATTATTATGTAAA
rJMFF020E20+ GAATGCCTGCCAATGATTCAAAGATGGCTTAGCATTTATCCTCTTTGATTATTATGTAAA
rJMFF043M12+ GAATGCCTGCCAATGATTCAAAGATGGCTTAGCATTTATCCTCTTTGATTATTATGTAAA
rJMFF039P04+ GAATGCCTGCCAATGATTCAAAGATGGCTTAGCATTTATCCTCTTTGATTATTATGTAAA
____________________________________________________________
consensus GAATGCCTGCCAATGATTCAAAGATGGCTTAGCATTTATCCTCTTTGATTATTATGTAAA
. : . : . : . : . : . :
rJMSF053C17+ ATTATATTGAATGCATATTATATTCCATAT
rJMFF012A21+ ATTATATTGAATGCATATTATATTCCATATTAAAATGGTAAGTGTTTGGCGATCTCTTGA
rJMFF020E20+ ATTATATTGAATGCATATTATATTCCATATTAAAATGGTAAGTGTTTGGCGATCTCTTGA
rJMFF043M12+ ATTATATTGAATGCATATTATATTCCATATTAAAATGGTAAGTGTTTGGCGATTTCTTGA
rJMFF039P04+ ATTATATTGAATGCATATTATATTCCATATTAAAATGGTAAGTGTTTGGCGATCTCTTGA
____________________________________________________________
consensus ATTATATTGAATGCATATTATATTCCATATTAAAATGGTAAGTGTTTGGCGATCTCTTGA
. : . : . : . : . : . :
rJMFF012A21+ AGGGATTGACCCTCTACTTACCGGTTATGCACTAGGAGTTATTAAA
rJMFF020E20+ AGGGATTGACCCTCTACTTACCGGTTATGCACTAGGAGTTATTAAATGATTTAGTTTCAT
rJMFF043M12+ AGGGATTGACCCTTTACTTACCGGTTATGCACTAGGAGTTATTAAATGATTTAGTTTCAT
rJMFF039P04+ AGGGATTGACCCTCTACTTACCGGTTATGCACTAGGAGTTATTAAATGATTTAGTTTCAT
____________________________________________________________
consensus AGGGATTGACCCTCTACTTACCGGTTATGCACTAGGAGTTATTAAATGATTTAGTTTCAT
. : . : . : . : . : . :
rJMFF020E20+ TTTTCTGTCTACTTGCCGTTCTCCTTATTAGTCGGAC
rJMFF043M12+ TTTTCTGTTTACTTGCCGTTCTCCTTATTAGTCGGACTTAAGATTTTGTGATTACCAAAT
rJMFF039P04+ TTTTCTGTCTACTTGCCGTTCTCCTTATTAGTCGGACTTAAGATTTTGTGATTACCAAAT
____________________________________________________________
consensus TTTTCTGTCTACTTGCCGTTCTCCTTATTAGTCGGACTTAAGATTTTGTGATTACCAAAT
. : . : . : . : . : . :
rJMFF043M12+ TCAATGTCTAACCAATTTGACTAGGGT
rJMFF039P04+ TCAATGTCTAACCAATTTGACTAGGGTTATAATTGCCCAAAATTGTAATATGTGATACCG
____________________________________________________________
consensus TCAATGTCTAACCAATTTGACTAGGGTTATAATTGCCCAAAATTGTAATATGTGATACCG