Contig 013774:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037H23Sequence569013774 (2)gb|AAK48495.1|AF259983_13e-46putative cysteine protease [Ipomoea batatas]762013774 (2)gb|AAK48495.1|AF259983_14e-36putative cysteine protease [Ipomoea batatas]

Alignment

This contig is upended


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JMFF037H23-                              GTTCTACATTTTTCTCCTCTGATCCGTCATGGCAAATCTTT
                      ____________________________________________________________
consensus                                GTTCTACATTTTTCTCCTCTGATCCGTCATGGCAAATCTTT
 
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JMFF037H23-           CGATTCTTTTAATGTTTGTGTTCGCCGTCGTTTCCTTGGCGGCGGACATGTCGATCATAA
                      ____________________________________________________________
consensus             CGATTCTTTTAATGTTTGTGTTCGCCGTCGTTTCCTTGGCGGCGGACATGTCGATCATAA
 
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JMFF037H23-           CCTACGACAACCGACATCCGGCGAGAGGGCAGGGCAGGGCCGACGAAGAGGTCATGGCTT
rJMFF037H23+                            CGGCGAGAGGNCAGGGCAGGGCCGACGAAGAGGTCATGGCTT
                      ____________________________________________________________
consensus             CCTACGACAACCGACATCCGGCGAGAGGGCAGGGCAGGGCCGACGAAGAGGTCATGGCTT
 
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JMFF037H23-           TGTACGAGTCGTGGCTGGTTAAGCACGGAAAAGAGTACAGCGGTGTCGGAGAAAAGGAGG
rJMFF037H23+          TGTACGAGTCGTGGCTGGTTAAGCACGGAAAAGAGTACAGCGGTGTCGGAGAAAAGGAGG
                      ____________________________________________________________
consensus             TGTACGAGTCGTGGCTGGTTAAGCACGGAAAAGAGTACAGCGGTGTCGGAGAAAAGGAGG
 
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JMFF037H23-           AGCGGTTCGGAATATTTAAGGATAATCTTAGGTTCATCGACGAGCAAAACAGTATTGGAA
rJMFF037H23+          AGCGGTTCGGAATATTTAAGGATAATCTTAGGTTCATCGACGAGCAAAACAGTATTGGAA
                      ____________________________________________________________
consensus             AGCGGTTCGGAATATTTAAGGATAATCTTAGGTTCATCGACGAGCAAAACAGTATTGGAA
 
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JMFF037H23-           ATCGGACCTATAAGCTTGGGTTGAACCGCTTCGCCGATCTTACCAACCACGAGTACCGGT
rJMFF037H23+          ATCGGACCTATAAGCTTGGGTTGAACCGCTTCNCCGATCTTACCAACCACGAGTACCGGT
                      ____________________________________________________________
consensus             ATCGGACCTATAAGCTTGGGTTGAACCGCTTCGCCGATCTTACCAACCACGAGTACCGGT
 
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JMFF037H23-           CTGCTTATCTCGGCACCAAAACCTACGATCATGCTCGCCGGAGACTCTCACACAAGAAAA
rJMFF037H23+          CTGCTTATCTCGGCACCAAAACCTACGATCATGCTCGCCGGAGACTCTCACACAAGAAAA
                      ____________________________________________________________
consensus             CTGCTTATCTCGGCACCAAAACCTACGATCATGCTCGCCGGAGACTCTCACACAAGAAAA
 
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JMFF037H23-           GCGACCGGCAAGCAACACCTGCTGCTGTGTTTTCCTAGTAGGAGACTTCTGTTTTGCATG
rJMFF037H23+          GCGACCGGCAAGCAACACCTGCTGCTGTGTTTTCCTAGTAGGAGACTTCTGTTTTGCATG
                      ____________________________________________________________
consensus             GCGACCGGCAAGCAACACCTGCTGCTGTGTTTTCCTAGTAGGAGACTTCTGTTTTGCATG
 
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JMFF037H23-           GGGGTGTTGCCCTCTTGAAAATGCAATCTGCTGTGATGACCATTTCAGTTGCTGCCCTCA
rJMFF037H23+          GGGGTGTTGCCCTCTTGAAAATGCAATCTGCTGTGATGACCATTTCAGTTGCTGCCCTCA
                      ____________________________________________________________
consensus             GGGGTGTTGCCCTCTTGAAAATGCAATCTGCTGTGATGACCATTTCAGTTGCTGCCCTCA
 
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JMFF037H23-           TGACTACCCGGTTTGTAACGTTAGGCAAGGCACCTGCTTAATGAGCAA            
rJMFF037H23+          TGACTACCCGGTTTGTAACGTTAGGCAAGGCACCTGCTTAATGAGCAAGAATAACCCGCT
                      ____________________________________________________________
consensus             TGACTACCCGGTTTGTAACGTTAGGCAAGGCACCTGCTTAATGAGCAAGAATAACCCGCT
 
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rJMFF037H23+          TGGAGTGAAGGCGATGAAGCGCATCCGTGCTCAACCAATTGGTGCTTTTAGTGATAAGGG
                      ____________________________________________________________
consensus             TGGAGTGAAGGCGATGAAGCGCATCCGTGCTCAACCAATTGGTGCTTTTAGTGATAAGGG
 
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rJMFF037H23+          AAAGAAAAGCATCAAAGCATCAGTTCTTGAGAATTGATTATATTCCAGTTTGAAAGCAGT
                      ____________________________________________________________
consensus             AAAGAAAAGCATCAAAGCATCAGTTCTTGAGAATTGATTATATTCCAGTTTGAAAGCAGT
 
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rJMFF037H23+          GGTGTGGGGAAGGAAAAGTGTGCATTATATTTTTCTGCAGTCTTTTTTACTGCTTGTTTC
                      ____________________________________________________________
consensus             GGTGTGGGGAAGGAAAAGTGTGCATTATATTTTTCTGCAGTCTTTTTTACTGCTTGTTTC
 
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rJMFF037H23+          TACTATTGTGATATTGACAATATTTTTCTTTCATAATATGCTTATTGTGATTAATTTTAT
                      ____________________________________________________________
consensus             TACTATTGTGATATTGACAATATTTTTCTTTCATAATATGCTTATTGTGATTAATTTTAT
 
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rJMFF037H23+          GTGATCCCCCTCCAAAAAAAAGAGCAATCCCAGCTGAATTGGTCGGTTGACTTTATAATA
                      ____________________________________________________________
consensus             GTGATCCCCCTCCAAAAAAAAGAGCAATCCCAGCTGAATTGGTCGGTTGACTTTATAATA