Contig 013771:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036K17Sequence522013771 (4)ref|XP_006347803.1|164PREDICTED: uncharacterized protein LOC102601146 [Solanum tuberosum]671013771 (4)ref|XP_006347803.1|211PREDICTED: uncharacterized protein LOC102601146 [Solanum tuberosum]
JMFN044O08Sequence617013771 (4)ref|XP_006347803.1|218PREDICTED: uncharacterized protein LOC102601146 [Solanum tuberosum]
JMSF018H02Sequence243023175ref|XP_009798935.1|8e-04PREDICTED: auxin transporter-like protein 2 [Nicotiana sylvestris]709013771 (4)ref|XP_006347803.1|215PREDICTED: uncharacterized protein LOC102601146 [Solanum tuberosum]

Alignment

This contig is upended


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JMFF036K17-                                               AGATTGATCTCAACAACAAACAAG
                      ____________________________________________________________
consensus                                                 AGATTGATCTCAACAACAAACAAG
 
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JMFF036K17-           CTCTTTAATGGCTTCATCAGCAACAACTAGAGCTTCCTTCACATTCTACCTCTCCCAGAC
rJMSF018H02+                                                              TCCCAGAC
                      ____________________________________________________________
consensus             CTCTTTAATGGCTTCATCAGCAACAACTAGAGCTTCCTTCACATTCTACCTCTCCCAGAC
 
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JMFF036K17-           CCAACTCCCCACCCCTCCAAAACCCAAACCCCACCTCTCCTACCCCTATTCCCCTCTCCT
rJMSF018H02+          CCAACTCCCCACCCCTCCAAAACCCAAACCCCACCTCTCCTACCCCTATTCCCCTCTCCT
rJMFF036K17+                                                           TCCCCTCTCCT
                      ____________________________________________________________
consensus             CCAACTCCCCACCCCTCCAAAACCCAAACCCCACCTCTCCTACCCCTATTCCCCTCTCCT
 
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JMFF036K17-           CCCAAAACCCCTCTTCCTTTCCTCCATTTCCAGACACCCAAAGCCTCCAAGATCCATAGA
JMFN044O08-                   CCCTCTTCCTTTCCTCCATTTCCAGACACCCAAAGCCTCCAAGATCCATAGA
rJMSF018H02+          CCCAAAACCCCTCTTCCTTTCCTCCATTTCCAGACACCCAAAGCCTCCAAGATCCATAGA
rJMFF036K17+          CCCAAAACCCCTCTTCCTTTCCTCCATTTCCAGACACCCAAAGCCTCCAAGATCCATAGA
                      ____________________________________________________________
consensus             CCCAAAACCCCTCTTCCTTTCCTCCATTTCCAGACACCCAAAGCCTCCAAGATCCATAGA
 
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JMFF036K17-           TGTCTCCCAAGAAGACAAGCCCATTTCCCAGCAACCAATTTCAGAACAGGCTGTTCAAGA
JMFN044O08-           TGTCTCCCAAGAAGACAAGCCCATTTCCCAGCAACCAATTTCAGAACAGGCTGTTCAAGA
rJMSF018H02+          TGTCTCCCAAGAAGACAAGCCCATTTCCCAGCAACCAATTTCAGAACAGGCTGTTCAAGA
rJMFF036K17+          TGTCTCCCAAGAAGACAAGCCCATTTCCCAGCAACCAATTTCAGAACAGGCTGTTCAAGA
                      ____________________________________________________________
consensus             TGTCTCCCAAGAAGACAAGCCCATTTCCCAGCAACCAATTTCAGAACAGGCTGTTCAAGA
 
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JMFF036K17-           ACCAAGCTTTTCTCCAGAAACCTCTCAAGATTCACTCACAGAGGCTGAGAATTTCGATAA
JMFN044O08-           ACCAAGCTTTTCTCCAGAAACCTCTCAAGATTCACTCACAGAGGCTGAGAATTTCGATAA
rJMSF018H02+          ACCAAGCTTTTCTCCAGAAACCTCTCAAGATTCACTCACAGAGGCTGAGAATTTCGATAA
rJMFF036K17+          ACCAAGCTTTTCTCCAGAAACCTCTCAAGATTCACTCACAGAGGCTGAGAATTTCGATAA
                      ____________________________________________________________
consensus             ACCAAGCTTTTCTCCAGAAACCTCTCAAGATTCACTCACAGAGGCTGAGAATTTCGATAA
 
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JMFF036K17-           GAGGAGATTGGAGGAGAAATTCGCTGTGCTAAACACTGGGATTTGTGAGTGCAGGTCCTG
JMFN044O08-           GAGGAGATTGGAGGAGAAATTCGCTGTGCTAAACACTGGGATTTATGAGTGCAGGTCCTG
rJMSF018H02+          GAGGAGATTGGAGGAGAAATTCGCTGTGCTAAACACTGGGATTTATGAGTGCAGGTCCTG
rJMFF036K17+          GAGGAGATTGGAGGAGAAATTCGCTGTGCTAAACACTGGGATTTGTGAGTGCAGGTCCTG
                      ____________________________________________________________
consensus             GAGGAGATTGGAGGAGAAATTCGCTGTGCTAAACACTGGGATTTGTGAGTGCAGGTCCTG
 
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JMFF036K17-           TGGGTTCAAATATGATGAGGCAGCTGGTGACCCTTCATATCCCATTCCTCCTGGGTTGCC
JMFN044O08-           TGGGTTCAAATATGATGAGGCAGCTGGTGACCCTTCATATCCCATTCCTCCTGGGTTGCC
rJMSF018H02+          TGGGTTCAAATATGATGAGGCAGCTGGTGACCCTTCATATCCCATTCCTCCTGGGTTGCC
rJMFF036K17+          TGGGTTCAAATATGATGAGGCAGCTGGTGACCCTTCATATCCCATTCCTCCTGGGTTGCC
                      ____________________________________________________________
consensus             TGGGTTCAAATATGATGAGGCAGCTGGTGACCCTTCATATCCCATTCCTCCTGGGTTGCC
 
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JMFF036K17-           CTTTGATAGGATGCCTGAGGATTGGAGGTGCCCTACTTGTGGGGCGGCCAAGAGTTTCTT
JMFN044O08-           CTTTGATAGGATGCCTGAGGATTGGAGGTGCCCTACTTGTGGGGCGGCCAAGAGTTTCTT
rJMSF018H02+          CTTTGATAGGATGCCTGAGGATTGGAGGTGCCCTACTTGTGGGGCGGCCAAGAGTTTCTT
rJMFF036K17+          CTTTGATAGGATGCCTGAGGATTGGAGGTGCCCTACTTGTGGGGCGGCCAAGAGTTTCTT
                      ____________________________________________________________
consensus             CTTTGATAGGATGCCTGAGGATTGGAGGTGCCCTACTTGTGGGGCGGCCAAGAGTTTCTT
 
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JMFF036K17-           CCAGAGCAAGAGCGTGGA                                          
JMFN044O08-           CCAGAGCAAGAGCGTGGAGATTGCCGGTTTTGCCCAGAATCAGCAATTTGGATTGGGTGG
rJMSF018H02+          CCAGAGCAAGAGCGTGGAGATTGCCGGTTTTGCCCAGAATCAGCAATTTGGATTGGGTGG
rJMFF036K17+          CCAGAGCAAGAGCGTGGAGATTGCCGGTTTTGCCCAGAATCAGCAATTTGGATTGGGTGG
                      ____________________________________________________________
consensus             CCAGAGCAAGAGCGTGGAGATTGCCGGTTTTGCCCAGAATCAGCAATTTGGATTGGGTGG
 
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JMFN044O08-           TAATACTCTCACCTCTGGCCAGAAGGCTCTCCTTATCTATGGTGGTTTGTTCTTGGGATT
rJMSF018H02+          TAATACTCTCACCTCTGGCCAGAAGGCTCTCCTTATCTATGGTGGTTTGTTCTTGGGATT
rJMFF036K17+          TAATACTCTCACCTCTGGCCAGAAGGCTCTCCTTATCTATGGTGGTTTGTTCTTGGGATT
                      ____________________________________________________________
consensus             TAATACTCTCACCTCTGGCCAGAAGGCTCTCCTTATCTATGGTGGTTTGTTCTTGGGATT
 
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JMFN044O08-           CGTGTTCTTCTTGTCTGGTTACTTTCTGCAATAGCTGAGGACTTTATGTTTTGCTCAATT
rJMSF018H02+          CGTGTTCTTCTTGTCTGGTTACTTTCTGCAATAGCTGAGGACTTTATGTTTTGCTCAATT
rJMFF036K17+          CGTGTTCTTCTTGTCTGGTTACTTTCTGCAATAGCTGAGGACTTTATGTTTTGCTCAATT
                      ____________________________________________________________
consensus             CGTGTTCTTCTTGTCTGGTTACTTTCTGCAATAGCTGAGGACTTTATGTTTTGCTCAATT
 
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JMFN044O08-           TGATGATTCTCAGTTAGTATAGATTTTTGCACTTGTGTTGTTATGTGATGATAATAATAA
rJMSF018H02+          TGATGGTTCTCAGTTAGTATAGATTTTTGCACTTGTGTTGTTATGTGATGATAATAATAA
rJMFF036K17+          TGATGATTCTCAGTTAGTATAGATTTTTGCACTTGTGTTGTTATGTGATGATAATAATAA
                      ____________________________________________________________
consensus             TGATGATTCTCAGTTAGTATAGATTTTTGCACTTGTGTTGTTATGTGATGATAATAATAA
 
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JMFN044O08-           TAATAGTGTATGGTTTGGTATAC                                     
rJMSF018H02+          TAATAGTGTATGGTTTGGTATAC                                     
rJMFF036K17+          TAATAGTGTATGGTTTGGTATACAGAGATGTAAGTAAGATTCAAATATATGCAAAAACCA
                      ____________________________________________________________
consensus             TAATAGTGTATGGTTTGGTATACAGAGATGTAAGTAAGATTCAAATATATGCAAAAACCA