Contig 013766:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036B01Sequence427013766 (2)ref|XP_009804094.1|2e-13PREDICTED: transmembrane protein 185-like [Nicotiana sylvestris] ref|XP_00980409542013766 (2)ref|XP_009804094.1|5e-56PREDICTED: transmembrane protein 185-like [Nicotiana sylvestris] ref|XP_00980409

Alignment

This contig is upended


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JMFF036B01-                              ACGTTTGGATTCAGATCTCAGTCACACTCGCAGATACACTT
                      ____________________________________________________________
consensus                                ACGTTTGGATTCAGATCTCAGTCACACTCGCAGATACACTT
 
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JMFF036B01-           TCTATTCGTCACCACAATCCATTTTCTTAATTTCTTCCCTGCGATCTAAGGCTTAATTTG
                      ____________________________________________________________
consensus             TCTATTCGTCACCACAATCCATTTTCTTAATTTCTTCCCTGCGATCTAAGGCTTAATTTG
 
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JMFF036B01-           GAATTCTGAGAGTTCGGTTGCTATGAGAGAACGGAGCAACGGGCTGAGGAATTTGGCTAC
                      ____________________________________________________________
consensus             GAATTCTGAGAGTTCGGTTGCTATGAGAGAACGGAGCAACGGGCTGAGGAATTTGGCTAC
 
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JMFF036B01-           TCCTGATAAAGGAGGTGCGCACGATAAGAGAGGCGGTGGTGGTGGTGCGCATAATAACAA
                      ____________________________________________________________
consensus             TCCTGATAAAGGAGGTGCGCACGATAAGAGAGGCGGTGGTGGTGGTGCGCATAATAACAA
 
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JMFF036B01-           TCATACCAGGGCGAGTCACAATAATAATGATCACCACCACCACCACGGCGGCGCTGGTGG
rJMFF036B01+                                                    CCACGGCGGCGGTGGTGG
                      ____________________________________________________________
consensus             TCATACCAGGGCGAGTCACAATAATAATGATCACCACCACCACCACGGCGGCGGTGGTGG
 
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JMFF036B01-           GTCGGTTTCATCGGAAACGGCCCATGAGAGCAAGAAAGGAGGGTCCTCCTCCGGCAGTGA
rJMFF036B01+          GTCGGTTTCATCGGAAACGGCCCATGAGAGCAAGAAAGGAGGGTCCTCCTCCGGCAGTGA
                      ____________________________________________________________
consensus             GTCGGTTTCATCGGAAACGGCCCATGAGAGCAAGAAAGGAGGGTCCTCCTCCGGCAGTGA
 
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JMFF036B01-           TGCAATTCCGGCGGTTTGGCCGCCTAAGTTCGTTATCGCGCTTACCAATAAGGAGAAAGA
rJMFF036B01+          TGCAATTCCGGCGGTTTGGCCGCCTAAGTTCGTTATCGCGCTTACCAATAAGGAGAAAGA
                      ____________________________________________________________
consensus             TGCAATTCCGGCGGTTTGGCCGCCTAAGTTCGTTATCGCGCTTACCAATAAGGAGAAAGA
 
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JMFF036B01-           GGAGGATTTCATGGCCATCAAAGGAT                                  
rJMFF036B01+          GGAGGATTTCATGGCCATCAAAGGATCCAAGCTTCCTCAGCGACCCAAAAAACGAGCCAA
                      ____________________________________________________________
consensus             GGAGGATTTCATGGCCATCAAAGGATCCAAGCTTCCTCAGCGACCCAAAAAACGAGCCAA
 
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rJMFF036B01+          ATTCATCCAGCGTACTCTCAATTTAATTAGTCCTGGAGCATGGCTATGCGATCTTTCCCT
                      ____________________________________________________________
consensus             ATTCATCCAGCGTACTCTCAATTTAATTAGTCCTGGAGCATGGCTATGCGATCTTTCCCT
 
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rJMFF036B01+          CGAGCGGTATGAAGTAAGAGAGAAAAAGGTCTCCAAGAAGAGACCTAGAGGGTTGAAGGC
                      ____________________________________________________________
consensus             CGAGCGGTATGAAGTAAGAGAGAAAAAGGTCTCCAAGAAGAGACCTAGAGGGTTGAAGGC
 
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rJMFF036B01+          AATGGGAAACATGGATTCCGATTCAGAGTAGAGTGAGCGTTATCCGAAAGAAAAAGTTGG
                      ____________________________________________________________
consensus             AATGGGAAACATGGATTCCGATTCAGAGTAGAGTGAGCGTTATCCGAAAGAAAAAGTTGG
 
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rJMFF036B01+          TGGATTAAGTAATGTATTTGATGGATTTTGAGGTGGAGAAGAAGAATGAATATGATAAAT
                      ____________________________________________________________
consensus             TGGATTAAGTAATGTATTTGATGGATTTTGAGGTGGAGAAGAAGAATGAATATGATAAAT