Contig 013760:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035E06Sequence513013760 (2)ref|XP_010317149.1|6e-61PREDICTED: STS14 protein [Solanum lycopersicum]722013760 (2)ref|XP_010317149.1|5e-77PREDICTED: STS14 protein [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF035E06- ATTTGCATAGACAATCTAG
                      ____________________________________________________________
consensus ATTTGCATAGACAATCTAG
 
. : . : . : . : . : . :
JMFF035E06- CATTGTTGTTATTTGAGAAGAAGAAATGGTGAAAATATTATCTTTATCAGTGATAATTGC
rJMFF035E06+ GC
                      ____________________________________________________________
consensus CATTGTTGTTATTTGAGAAGAAGAAATGGTGAAAATATTATCTTTATCAGTGATAATTGC
 
. : . : . : . : . : . :
JMFF035E06- ACTAGCCATATGCCACGGTTGTGCGCAAGGAGTGCCAGCAGCACCACCGAC-GGGGGCCG
rJMFF035E06+ ACTAGCCATATGCCACGGTTGTGCGCAAGGAGTGCCAGCAGCACCACCGACGGGGGGCCG
                      ____________________________________________________________
consensus ACTAGCCATATGCCACGGTTGTGCGCAAGGAGTGCCAGCAGCACCACCGACGGGGGGCCG
 
. : . : . : . : . : . :
JMFF035E06- CGACGCCGGCGCCTCTGCCGCGCTCCGCCCAGGAGTATCTGGATGTGCACAACCAAGCAA
rJMFF035E06+ CGACGCCGGCGCCTCTGCCGCGCTCCGCCCAGGAGTATCTGGATGTGCACAACCAAGCAA
                      ____________________________________________________________
consensus CGACGCCGGCGCCTCTGCCGCGCTCCGCCCAGGAGTATCTGGATGTGCACAACCAAGCAA
 
. : . : . : . : . : . :
JMFF035E06- GGGCGGAAGTGGGCGTCGCCCCGCTGACCTGGAGCCCGATGCTGGCCACCGCCGCGAGCC
rJMFF035E06+ GGGCGGAAGTGGGCGTCGCCCCGCTGACCTGGAGCCCGATGCTGGCCACCGCCGCGAGCC
                      ____________________________________________________________
consensus GGGCGGAAGTGGGCGTCGCCCCGCTGACCTGGAGCCCGATGCTGGCCACCGCCGCGAGCC
 
. : . : . : . : . : . :
JMFF035E06- TGCAGGTTCGTTACCAGCGGGACAAGCAGAACTGCAGCTTCGCCGACATAAGCAGCGGCA
rJMFF035E06+ TGCAGGTTCGTTACCAGCGGGACAAGCAGAACTGCAGCTTCGCCGACATAAGCAGCGGCA
                      ____________________________________________________________
consensus TGCAGGTTCGTTACCAGCGGGACAAGCAGAACTGCAGCTTCGCCGACATAAGCAGCGGCA
 
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JMFF035E06- AGTACGGCGGCAACCAGCTGCTGGCGGGCGGAATGGCGGTGACGCCGCGGATGGCGGTGG
rJMFF035E06+ AGTACGGCGGCAACCAGCTGCTGGCGGGCGGAATGGCGGTGACGCCGCGGATGGCGGTGG
                      ____________________________________________________________
consensus AGTACGGCGGCAACCAGCTGCTGGCGGGCGGAATGGCGGTGACGCCGCGGATGGCGGTGG
 
. : . : . : . : . : . :
JMFF035E06- AGCATTGGGTGGAGGAGAAGAGCTTCTACGACTACGCTAACAATTCTTGCGCCGCCGACC
rJMFF035E06+ AGCATTGGGTGGAGGAGAAGAGCTTCTACGACTACGCTAACAATTCTTGCGCCGCCGACC
                      ____________________________________________________________
consensus AGCATTGGGTGGAGGAGAAGAGCTTCTACGACTACGCTAACAATTCTTGCGCCGCCGACC
 
. : . : . : . : . : . :
JMFF035E06- ACAAGTGCGGCGTGTACACCCAGGTTGTTTGGAAGAAATCGCTGGAACTGGGTTGCTCTC
rJMFF035E06+ ACAAGTGCGGCGTGTACACCCAGGTTGTTTGGAAGAAATCGCTGGAACTGGGTTGCTCTC
                      ____________________________________________________________
consensus ACAAGTGCGGCGTGTACACCCAGGTTGTTTGGAAGAAATCGCTGGAACTGGGTTGCTCTC
 
. : . : . : . : . : . :
JMFF035E06- AGGCGACGTGTCCTA
rJMFF035E06+ AGGCGACGTGTCCTAAAGGCCAGATTACCTTAACCATATGCTTCTACAATCCTCCCGGAA
                      ____________________________________________________________
consensus AGGCGACGTGTCCTAAAGGCCAGATTACCTTAACCATATGCTTCTACAATCCTCCCGGAA
 
. : . : . : . : . : . :
rJMFF035E06+ ACATCATCGGAGAGAGACCGTACTAATGCTTATCTTGTTCTTGTTAACCCAGTCAAGATT
                      ____________________________________________________________
consensus ACATCATCGGAGAGAGACCGTACTAATGCTTATCTTGTTCTTGTTAACCCAGTCAAGATT
 
. : . : . : . : . : . :
rJMFF035E06+ CAAGATGTTCTTCGTTTCCAGAGAAATAAGATTTAGGATTATTGGTCAAATAATGGCACT
                      ____________________________________________________________
consensus CAAGATGTTCTTCGTTTCCAGAGAAATAAGATTTAGGATTATTGGTCAAATAATGGCACT
 
. : . : . : . : . : . :
rJMFF035E06+ TGTTGTACTAATGCTTGGTTGTTTGTCGGATTAGGTTTTCCTTGTGAAGAATTTGTGCTT
                      ____________________________________________________________
consensus TGTTGTACTAATGCTTGGTTGTTTGTCGGATTAGGTTTTCCTTGTGAAGAATTTGTGCTT
 
. : . : . : . : . : . :
rJMFF035E06+ TTATCCATTTATAGTCTTTGATCAACTCAACTAGAGTAATGAACACCAGGATTCGATTGA
                      ____________________________________________________________
consensus TTATCCATTTATAGTCTTTGATCAACTCAACTAGAGTAATGAACACCAGGATTCGATTGA