Contig 013758:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034J23Sequence530013758 (2)ref|XP_010259755.1|8e-19PREDICTED: protein GLUTAMINE DUMPER 5-like [Nelumbo nucifera]648013758 (2)ref|XP_010259755.1|2e-18PREDICTED: protein GLUTAMINE DUMPER 5-like [Nelumbo nucifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF034J23- AATATAATACAGTTTCTCCTCCTCTCCA
                      ____________________________________________________________
consensus AATATAATACAGTTTCTCCTCCTCTCCA
 
. : . : . : . : . : . :
JMFF034J23- CCGTCGCCACCGCCACCAATCTTAGCCTTACTAGAAGGAATTCTCAGGTAGAAATCCGTC
rJMFF034J23+ CCACCAATTTTAGCCTTACTAGAAGGAATTNTCAGGTAGAAATCCGTC
                      ____________________________________________________________
consensus CCGTCGCCACCGCCACCAATTTTAGCCTTACTAGAAGGAATTCTCAGGTAGAAATCCGTC
 
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JMFF034J23- GCCACCGCCACCTTCTCCACCAATCTTAGCCTTACGATAAGAAATTCTCAGGTTGAAATG
rJMFF034J23+ GCCACCGCCACNTTNTCCACCAATNTTAGCCTTACGATAAGAAATTCTCAGGTTGAAATG
                      ____________________________________________________________
consensus GCCACCGCCACCTTCTCCACCAATCTTAGCCTTACGATAAGAAATTCTCAGGTTGAAATG
 
. : . : . : . : . : . :
JMFF034J23- TTGACGCCGGATGAGGGTGCGGCCATGGCGGCAGCCAAGAATCCACTACCGCATTCCCCG
rJMFF034J23+ TTGACGCCGGATGAGGGTGCGGCCATGGCGGCAGCCAAGAATCCACTACCGCATTCCCCG
                      ____________________________________________________________
consensus TTGACGCCGGATGAGGGTGCGGCCATGGCGGCAGCCAAGAATCCACTACCGCATTCCCCG
 
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JMFF034J23- TCGCCGTCACAGTCGCCGTCCCCGGTGCCGTACCTTTTTGGCGGCCTGGCCGCCATGATG
rJMFF034J23+ TCGCCGTCACAGTCGCCGTCCCCGGTGCCGTACCTTTTTGGCGGCCTGGCCGCCATGATG
                      ____________________________________________________________
consensus TCGCCGTCACAGTCGCCGTCCCCGGTGCCGTACCTTTTTGGCGGCCTGGCCGCCATGATG
 
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JMFF034J23- GGGCTCATCGCTTGCGCAGTCTTGATCCTTATCTGCTCTTACTGGCGCCTCGCCGGGCCG
rJMFF034J23+ GGGCTCATCGCTTGCGCAGTCTTGATCCTTATCTGCTCTTACTGGCGCCTCGCCGGGCCG
                      ____________________________________________________________
consensus GGGCTCATCGCTTGCGCAGTCTTGATCCTTATCTGCTCTTACTGGCGCCTCGCCGGGCCG
 
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JMFF034J23- CTGGGTACCGGCGACGACCCCGAGCGGGACCCCGAGACCGGAGACGGCAATGGCAACGAC
rJMFF034J23+ CTGGGTACCGGCGACGACCCCGAGCGGGACCCCGAGACCGGAGACGGCAATGGCAACGAC
                      ____________________________________________________________
consensus CTGGGTACCGGCGACGACCCCGAGCGGGACCCCGAGACCGGAGACGGCAATGGCAACGAC
 
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JMFF034J23- GGGTCGGCGGCGGCGCCGCCGGCGGTGATGGAAGAGAAGCTTCTGGTCATTCTGGCTGGC
rJMFF034J23+ GGGTCGGCGGCGGCGCCGCCGGCGGTGATGGAAGAGAAGCTTCTGGTCATTCTGGCTGGC
                      ____________________________________________________________
consensus GGGTCGGCGGCGGCGCCGCCGGCGGTGATGGAAGAGAAGCTTCTGGTCATTCTGGCTGGC
 
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JMFF034J23- CAAGAAAAGCCGACTTGTTTGGCTACACCCGTGGCGAGTAGAGTATCGTCTTTTGGCAGT
rJMFF034J23+ CAAGAAAAGCCGACTTGTTTGGCTACACCCGTGGCGAGTAGAGTATCGTCTTTTGGCAGT
                      ____________________________________________________________
consensus CAAGAAAAGCCGACTTGTTTGGCTACACCCGTGGCGAGTAGAGTATCGTCTTTTGGCAGT
 
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JMFF034J23- AATTGCAGCTGTAGCAGTAGTA
rJMFF034J23+ AATTGCAGCTGTAGCAGTAGTACGGTGAGCAGTGAGAGTAGTACTCTGGGCAAATCTGAA
                      ____________________________________________________________
consensus AATTGCAGCTGTAGCAGTAGTACGGTGAGCAGTGAGAGTAGTACTCTGGGCAAATCTGAA
 
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rJMFF034J23+ GGGGAAAACGATGAGAAAAAATCAAGATTTTAACGGCGGCGGTGGTCAGGTGGAAATGGA
                      ____________________________________________________________
consensus GGGGAAAACGATGAGAAAAAATCAAGATTTTAACGGCGGCGGTGGTCAGGTGGAAATGGA
 
. : . : . : . : . : . :
rJMFF034J23+ AACCATATAGATTGGGTCTCTCGAAGTTAGCTTTTTTAAATTTTATTTTTATTTTTTTTA
                      ____________________________________________________________
consensus AACCATATAGATTGGGTCTCTCGAAGTTAGCTTTTTTAAATTTTATTTTTATTTTTTTTA