Contig 013757:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001A05Sequence571013757 (4)emb|CDO98845.1|5e-60unnamed protein product [Coffea canephora]612013757 (4)emb|CDO98845.1|1e-59unnamed protein product [Coffea canephora]
JMFF034J01Sequence572013757 (4)emb|CDO98845.1|1e-60unnamed protein product [Coffea canephora]600013757 (4)emb|CDO98845.1|1e-60unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF001A05-                                GCCACTAACACCACACCACACACAATCATTCACCCCCTC
rJMFF001A05+                                              CCACACACAATCATTCACCCCCTC
                      ____________________________________________________________
consensus                                  GCCACTAACACCACACCACACACAATCATTCACCCCCTC
 
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JMFF001A05-           CCCCAACTCCATCACCTCCGCCCTCCCTCTGTTCTCACAAATCCCAATCTCCGACAAAAA
JMFF034J01-           CCCCGACTCCATCACCTCCGCCCTCCCTCTGTTCTCACAAATCCCAATCTCCGACAAAAA
rJMFF001A05+          CCCCAACTCCATCACCTCCGCCCTCCCTCTGTTCTCACAAATCCCAATCTCCGACAAAAA
rJMFF034J01+          CCCCGACTCCATCACCTCCGCCCTCCCTCTGTTCTCACAAATCCCAATCTCCGACAAAAA
                      ____________________________________________________________
consensus             CCCCGACTCCATCACCTCCGCCCTCCCTCTGTTCTCACAAATCCCAATCTCCGACAAAAA
 
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JMFF001A05-           CAAATATGAGCGAAGATTCCAAGAGAAATGATGGCGGAGCTCTCGTGGCCAAGCTGCCCG
JMFF034J01-           CAAATATGAGCGAAGATTCCAAGAGAAATGATGGCGGAGCTCTCGTGGCCAAGCTGCCCG
rJMFF001A05+          CAAATATGAGCGAAGATTCCAAGAGAAATGATGGCGGAGCTCTCGTGGCCAAGCTGCCCG
rJMFF034J01+          CAAATATGAGCGAAGATTCCAAGAGAAATGATGGCGGAGCTCTCGTGGCCAAGCTGCCCG
                      ____________________________________________________________
consensus             CAAATATGAGCGAAGATTCCAAGAGAAATGATGGCGGAGCTCTCGTGGCCAAGCTGCCCG
 
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JMFF001A05-           CCGCCGACGATCGGAAATCCGCATCCCCGCCGGCGTCTTCTATTACCGTGTCCAAGAAGG
JMFF034J01-           CCGCCGACGATCGGAAATCCGCATCCCCGCCGGCGTCTTCTATTACCGTGTCCAAGAAGG
rJMFF001A05+          CCGCCGACGATCGGAAATCCGCATCCCCGCCGGCGTCTTCTATTACCGTGTCCAAGAAGG
rJMFF034J01+          CCGCCGACGATCGGAAATCCGCATCCCCGCCGGCGTCTTCTATTACCGTGTCCAAGAAGG
                      ____________________________________________________________
consensus             CCGCCGACGATCGGAAATCCGCATCCCCGCCGGCGTCTTCTATTACCGTGTCCAAGAAGG
 
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JMFF001A05-           TCATCATCAAAAGTGCCGATATGAAGGACGATATGCAGAAAGAGGCCGTCGATATCGCTA
JMFF034J01-           TCATCATCAAAAGTGCCGATATGAAGGACGATATGCAGAAAGAGGCCGTCGATATCGCTA
rJMFF001A05+          TCATCATCAAAAGTGCCGATATGAAGGACGATATGCAGAAAGAGGCCGTCGATATCGCTA
rJMFF034J01+          TCATCATCAAAAGTGCCGATATGAAGGACGATATGCAGAAAGAGGCCGTCGATATCGCTA
                      ____________________________________________________________
consensus             TCATCATCAAAAGTGCCGATATGAAGGACGATATGCAGAAAGAGGCCGTCGATATCGCTA
 
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JMFF001A05-           TTTCGGCATTCGAGAAGAACAACGTGGAGAAGGATGTAGCTGAGCATATAAAGAAGGAGT
JMFF034J01-           TTTCGGCATTCGAGAAGAACAACGTGGAGAAGGATGTAGCTGAGCATATAAAGAAGGAGT
rJMFF001A05+          TTTCGGCATTCGAGAAGAACAACGTGGAGAAGGATGTAGCTGAGCATATAAAGAAGGAGT
rJMFF034J01+          TTTCGGCATTCGAGAAGAACAACGTGGAGAAGGATGTAGCTGAGCATATAAAGAAGGAGT
                      ____________________________________________________________
consensus             TTTCGGCATTCGAGAAGAACAACGTGGAGAAGGATGTAGCTGAGCATATAAAGAAGGAGT
 
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JMFF001A05-           TCGATAAGAAGCATGGCCCGACTTGGCATTGCATTGTTGGCAAAAATTTTGGTTCCTATG
JMFF034J01-           TCGATAAGAAGCATGGCCCGACTTGGCATTGCATTGTTGGCAAAAATTTTGGTTCCTATG
rJMFF001A05+          TCGATAAGAAGCATGGCCCGACTTGGCATTGCATTGTTGGCAAAAATTTTGGTTCCTATG
rJMFF034J01+          TCGATAAGAAGCATGGCCCGACTTGGCATTGCATTGTTGGCAAAAATTTTGGTTCCTATG
                      ____________________________________________________________
consensus             TCGATAAGAAGCATGGCCCGACTTGGCATTGCATTGTTGGCAAAAATTTTGGTTCCTATG
 
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JMFF001A05-           TGACTCACGAAACAAACCACTTTGTCTATTTCTACTTGGATTCAAAAGCTGTGCTTCTCT
JMFF034J01-           TGACTCACGAAACAAACCACTTTGTCTATTTCTACTTGGATTCAAAAGCTGTGCTTCTCT
rJMFF001A05+          TGACTCACGAAACAAACCACTTTGTCTATTTCTACTTGGATTCAAAAGCTGTGCTTCTCT
rJMFF034J01+          TGACTCACGAAACAAACCACTTTGTCTATTTCTACTTGGATTCAAAAGCTGTGCTTCTCT
                      ____________________________________________________________
consensus             TGACTCACGAAACAAACCACTTTGTCTATTTCTACTTGGATTCAAAAGCTGTGCTTCTCT
 
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JMFF001A05-           TCAAATCAGGTTAAGCTTGGTGGTGACAGTGATAATGATGCTAGAGCTTGCTTGCCCTCT
JMFF034J01-           TCAAATCAGGTTAAGCTTGGTGGTGACAGTGATAATGATGCTAGAGCTTGCTTGCCCTCT
rJMFF001A05+          TCAAATCAGGTTAAGCTTGGTGGTGACAGTGATAATGATGCTAGAGCTTGCTTGCCCTCT
rJMFF034J01+          TCAAATCAGGTTAAGCTTGGTGGTGACAGTGATAATGATGCTAGAGCTTGCTTGCCCTCT
                      ____________________________________________________________
consensus             TCAAATCAGGTTAAGCTTGGTGGTGACAGTGATAATGATGCTAGAGCTTGCTTGCCCTCT
 
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JMFF001A05-           TTCTCTTGGTATGTATTTTATTTTAAAACTTGTGTGCAAATCATGTAGCTCG        
JMFF034J01-           TTCTCTTGGTATGTATTTTATTTTAAAACTTGTGTGCAAATCATGTAGCTCGAAATTCGG
rJMFF001A05+          TTCTCTTGGTATGTATTTTATTTTAAAACTTGTGTGCAAATCATGTAGCTCGAAATTCGG
rJMFF034J01+          TTCTCTTGGTATGTATTTTATTTTAAAACTTGTGTGCAAATCATGTAGCTCGAAATTCGG
                      ____________________________________________________________
consensus             TTCTCTTGGTATGTATTTTATTTTAAAACTTGTGTGCAAATCATGTAGCTCGAAATTCGG
 
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JMFF034J01-           TGTATATTTGTTTCGACT                                          
rJMFF001A05+          TGTATATTTGTTTCGACT                                          
rJMFF034J01+          TGTATATTTGTTTCGACTTGTAAACACATGAATGGAGTTGATCAGAGTGTTCCCTCCCAG
                      ____________________________________________________________
consensus             TGTATATTTGTTTCGACTTGTAAACACATGAATGGAGTTGATCAGAGTGTTCCCTCCCAG