Contig 013754:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021C24Sequence453017350ref|XP_004245825.1|129PREDICTED: uncharacterized protein LOC101248227 [Solanum lycopersicum]640013754 (4)ref|XP_006359214.1|269PREDICTED: uncharacterized protein LOC102591394 [Solanum tuberosum]
JMFF033N11Sequence457013754 (4)ref|XP_010055413.1|124PREDICTED: uncharacterized protein LOC104443618 [Eucalyptus grandis] gb|KCW71889733013754 (4)ref|XP_010274496.1|261PREDICTED: uncharacterized protein LOC104609812 [Nelumbo nucifera]
JMSF038N03Sequence656016838ref|XP_010055413.1|228PREDICTED: uncharacterized protein LOC104443618 [Eucalyptus grandis] gb|KCW71889856013754 (4)ref|XP_010274496.1|264PREDICTED: uncharacterized protein LOC104609812 [Nelumbo nucifera]

Alignment

This contig is upended


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JMFF033N11-                                   ATTCTTCCAATTTCCAAGCACCATGGCGATGTTGTC
rJMSF038N03+                                                       CATGGCGATGTTGTC
                      ____________________________________________________________
consensus                                     ATTCTTCCAATTTCCAAGCACCATGGCGATGTTGTC
 
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JMFF033N11-           ATCTGCCTCTCCAACTCACTTCCCATCTTTCTCTCCTTCCAAATCCAACCTTTCTTCCAA
rJMSF038N03+          ATCTGCCTCTCCAACTCACTTCCCATCTTTCTCTCCTTCCAAATCCAACCTTTCTTCCAA
                      ____________________________________________________________
consensus             ATCTGCCTCTCCAACTCACTTCCCATCTTTCTCTCCTTCCAAATCCAACCTTTCTTCCAA
 
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JMFF033N11-           GCTCTTTCACTCCCTCACTCCGCGAAAGCTTCACTTCTTGGTCCACACCAGCGCTGCCGG
rJMSF038N03+          GCTCTTTCACTCCCTCACTCCGCGAAAGCTTCACTTCTTGGTCCACACCAGCGCTGCCGG
                      ____________________________________________________________
consensus             GCTCTTTCACTCCCTCACTCCGCGAAAGCTTCACTTCTTGGTCCACACCAGCGCTGCCGG
 
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JMFF033N11-           GCAAGAAAAGGGGAGTGGACCTCCTGTTGCGGTTGAGGACTCTACTCTGAGCTCCAATGG
rJMSF038N03+          GCAAGAAAAGGGGAGTGGACCTCCTGTTGCGGTTGAGGACTCTACTCTGAGCTCCAATGG
rJMFF033N11+                                                         TGAGCTCCAATGG
                      ____________________________________________________________
consensus             GCAAGAAAAGGGGAGTGGACCTCCTGTTGCGGTTGAGGACTCTACTCTGAGCTCCAATGG
 
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JMFF033N11-           GTCGCCTGCATCGGTGGCTGCCGGAGCTCCGGCGCCGGAGGTTGTCAGCAAGTTCCGAGA
rJMSF038N03+          GTCGCCTGCATCGGTGGCTGCCGGAGCTCCGGCGCCGGAGGTTGTCAGCAAGTTCCGAGA
rJMFF021C24+                                 GAGCTCCGGCGCCGGAGGTTGTCAGCAAGTTCCGAGA
rJMFF033N11+          GTCGCCTGCATCGGTGGCTGCCGGAGCTCCGGCGCCGGAGGTTGTCAGCAAGTTCCGAGA
                      ____________________________________________________________
consensus             GTCGCCTGCATCGGTGGCTGCCGGAGCTCCGGCGCCGGAGGTTGTCAGCAAGTTCCGAGA
 
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JMFF033N11-           TCCTCGATGGGTTGGAGGGAGTTGGGAGTTGCGTCAGTTTCAGACCGATGGGAAGACCAA
rJMSF038N03+          TCCTCGATGGGTTGGAGGGAGTTGGGAGTTGCGTCAGTTTCAGACCGATGGGAAGACCAA
rJMFF021C24+          TCCTCGATGGGTTGGAGGGAGTTGGGAGTTGCGTCAGTTTCAGACCGATGGGGAGACCAA
rJMFF033N11+          TCCTCGATGGGTTGGAGGGAGTTGGGAGTTGCGTCAGTTTCAGACCGATGGGAAGACCAA
                      ____________________________________________________________
consensus             TCCTCGATGGGTTGGAGGGAGTTGGGAGTTGCGTCAGTTTCAGACCGATGGGAAGACCAA
 
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JMFF033N11-           TTGGGATGGTGTGATTGATGCCGAGGTTAAGAGGAGGAAATGGTTAGAAGATAACCCGGA
rJMSF038N03+          TTGGGATGGTGTGATTGATGCCGAGGTTAAGAGGAGGAAATGGTTAGAAGATAACCCGGA
rJMFF021C24+          TTGGGATGGTGTGATTGATGCCGAGGTTAAGAGGAGGAAATGGTTAGAAGATAACCCGGA
rJMFF033N11+          TTGGGATGGTGTGATTGATGCCGAGGTTAAGAGGAGGAAATGGTTAGAAGATAACCCGGA
                      ____________________________________________________________
consensus             TTGGGATGGTGTGATTGATGCCGAGGTTAAGAGGAGGAAATGGTTAGAAGATAACCCGGA
 
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JMFF033N11-           GACATCGAGCAACCAAGATCCTGTGGTTTTTGACACTTCCATTATTCCTTGGTGGGCATG
rJMSF038N03+          GACATCGAGCAACCAAGATCCTGTGGTTTTTGACACTTCCATTATTCCTTGGTGGGCATG
rJMFF021C24+          GACATCGAGCAGCCAAGATCCTGTGGTTTTTGACACTTCCATTATTCCTTGGTGGGCATG
rJMFF033N11+          GACATCGAGCAACCAAGATCCTGTGGTTTTTGACACTTCCATTATTCCTTGGTGGGCATG
                      ____________________________________________________________
consensus             GACATCGAGCAACCAAGATCCTGTGGTTTTTGACACTTCCATTATTCCTTGGTGGGCATG
 
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JMFF033N11-           G                                                           
rJMSF038N03+          GATGAAGAGGTTCCACCTTCCTGAAGCTGAAATCCTTAATGGGCGAGCTGCAATGGTAGG
rJMFF021C24+          GATGAAGAGGTTCCACCTTCCTGAAGCTGAAATCCTTAATGGGCGAGCTGCAATGGTAGG
rJMFF033N11+          GATGAAGAGGTTCCACCTTCCTGAAGCTGAAATCCTTAATGGGCGAGCTGCAATGGTAGG
                      ____________________________________________________________
consensus             GATGAAGAGGTTCCACCTTCCTGAAGCTGAAATCCTTAATGGGCGAGCTGCAATGGTAGG
 
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rJMSF038N03+          ATTCTTTATGGCTTACCTGGTTGACAGCTTGACCGGATTAGGCCTAGTGGATCAAATGGG
rJMFF021C24+          ATTCTTTATGGCTTACCTGGTTGACAGCTTGACCGGATTAGGCCTAGTGGATCAAATGGG
rJMFF033N11+          ATTCTTTATGGCTTACCTGGTTGACAGCTTGACCGGATTAGGCCTAGTGGATCAAATGGG
                      ____________________________________________________________
consensus             ATTCTTTATGGCTTACCTGGTTGACAGCTTGACCGGATTAGGCCTAGTGGATCAAATGGG
 
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rJMSF038N03+          CAATTTCTTCTGCAAAACCTTGTTGTTTGTAACAGTAGGTGGAGTTCTTTTGGTCCGAAA
rJMFF021C24+          CAATTTCTTCTGCAAAACCTTGTTGTTTGTAACAGTAGGTGGAGTTCTTTTGGTCCGAAA
rJMFF033N11+          CAATTTCTTCTGCAAAACCTTGTTGTTTGTAACAGTAGGTGGAGTTCTTTTGGTCCGAAA
                      ____________________________________________________________
consensus             CAATTTCTTCTGCAAAACCTTGTTGTTTGTAACAGTAGGTGGAGTTCTTTTGGTCCGAAA
 
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rJMSF038N03+          GAATGAGGACATAGAAGCACTGAAGAAGTTTCTAGAGGAGACAACATTCTACGACAAGCA
rJMFF021C24+          GAATGAGGACATAGAAGCACTGAAGAAGTTTCTAGAGGAGACAACATTCTACGACAAGCA
rJMFF033N11+          GAATGAGGACATAGAAGCACTGAAGAAGTTTCTAGAGGAGACAACATTCTACGACAAGCA
                      ____________________________________________________________
consensus             GAATGAGGACATAGAAGCACTGAAGAAGTTTCTAGAGGAGACAACATTCTACGACAAGCA
 
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rJMSF038N03+          GTGGCAGGCAAGTTGG                                            
rJMFF021C24+          GTGGCAGGCAAGTTGG                                            
rJMFF033N11+          GTGGCAGGCAAGTTGGAAAAAAGAGATTTCCACCGACTCTAATTGATTATTAATTAAGCT
                      ____________________________________________________________
consensus             GTGGCAGGCAAGTTGGAAAAAAGAGATTTCCACCGACTCTAATTGATTATTAATTAAGCT
 
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rJMFF033N11+          TTAATCTGTTGTATAAGCTAAGGTTTCAGAAATTTTATATGTTTAATTAGTCAGTGCGAC
                      ____________________________________________________________
consensus             TTAATCTGTTGTATAAGCTAAGGTTTCAGAAATTTTATATGTTTAATTAGTCAGTGCGAC
 
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rJMFF033N11+          TGAAACTAAGTATTTGTGTTCTTAAGATCGATGCATTACAGTACATCCTATGTTCATCAT
                      ____________________________________________________________
consensus             TGAAACTAAGTATTTGTGTTCTTAAGATCGATGCATTACAGTACATCCTATGTTCATCAT
 
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rJMFF033N11+          CATCTTCCTAGTTGATTGATTTTATGATGGCTGTTGTGTTGGAAAACATTATCAAAATCA
                      ____________________________________________________________
consensus             CATCTTCCTAGTTGATTGATTTTATGATGGCTGTTGTGTTGGAAAACATTATCAAAATCA