Contig 013748:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031L23Sequence516004968 (6)ref|XP_004246498.1|160PREDICTED: uncharacterized protein LOC101249753 [Solanum lycopersicum]772013748 (6)ref|XP_011004215.1|310PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]
JMFF039O12Sequence440004968 (6)ref|XP_004246498.1|142PREDICTED: uncharacterized protein LOC101249753 [Solanum lycopersicum]741013748 (6)ref|XP_011004215.1|297PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]
JMSF007E05Sequence421004968 (6)ref|XP_004246498.1|105PREDICTED: uncharacterized protein LOC101249753 [Solanum lycopersicum]745013748 (6)ref|XP_011004215.1|316PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]
JMSF023H06Sequence656004968 (6)emb|CDP15441.1|4e-53unnamed protein product [Coffea canephora]742013748 (6)ref|XP_011004215.1|308PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]
JMSF028I06Sequence616004968 (6)emb|CDP15441.1|1e-51unnamed protein product [Coffea canephora]713013748 (6)ref|XP_011004215.1|305PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]
JMSF045P05Sequence720004968 (6)emb|CDP15441.1|1e-52unnamed protein product [Coffea canephora]645013748 (6)ref|XP_011004215.1|275PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]

Alignment

This contig is upended


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rJMSF007E05+                                                                   AAG
                      ____________________________________________________________
consensus                                                                      AAG
 
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rJMSF007E05+          GCTGTCGAATCTGAGCTTCGAGGATACTGAATCTCCCAGAGCATCAAATCTTGTCAGACT
rJMSF028I06+                                         TCTCCCAGAGCATCAAATCTTGTCAGACT
rJMSF023H06+                        GCTTCGAGGATACTGAATCTCCCAGAGCATCAAATCTTGTCAGACT
rJMFF039O12+                                                GAGCATCAAATCTTGTCAGACT
rJMFF031L23+                        GCTTCGAGGATACTGAATCTCCCAGAGCATCAAATCTTGTCAGACT
                      ____________________________________________________________
consensus             GCTGTCGAATCTGAGCTTCGAGGATACTGAATCTCCCAGAGCATCAAATCTTGTCAGACT
 
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rJMSF007E05+          TCAGATGAACAGAGAAGACACCCATCGAATTCTCAACGGCTGCAAAACAAGAGGAATAAA
rJMSF028I06+          TCAGATGAACAGAGAAGACACCCATCGAATTCTCAACGGCTGCAAAACAAGAGGAATAAA
rJMSF045P05+                                               GGCTGCAAANCAAGAGGAATAAA
rJMSF023H06+          TCAGATGAACAGAGAAGACACCCATCGAATTCTCAACGGCTGCAAAACAAGAGGAATAAA
rJMFF039O12+          TCAGATGAACAGAGAAGACACCCATCGAATTCTCAACGGCTGCAAAACAAGAGGAATAAA
rJMFF031L23+          TCAGATGAACAGAGAAGACACCCATCGAATTCTCAACGGCTGCAAAACAAGAGGAATAAA
                      ____________________________________________________________
consensus             TCAGATGAACAGAGAAGACACCCATCGAATTCTCAACGGCTGCAAAACAAGAGGAATAAA
 
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rJMSF007E05+          ACTGTCAGGATTGTTGTCTGCTGCTGCCATGATTTCTGCATATTCTTCAAAGGGCCTTCC
rJMSF028I06+          ACTGTCAGGATTGTTGTCTGCTGCTGCCATGATTTCTGCATATTCTTCAAAGGGCCTTCC
rJMSF045P05+          ACTGTCAGGATTGTTGTCTGCTGCTGCCATGATTTCTGCATATTCTTCAAAGGGCCTTCC
rJMSF023H06+          ACTGTCAGGATTGTTGTCTGCTGCTGCCATGATTTCTGCATATTCTTCAAAGGGCCTTCC
rJMFF039O12+          ACTGTCAGGATTGTTGTCTGCTGCTGCCATGATTTCTGCATATTCTTCAAAGGGCCTTCC
rJMFF031L23+          ACTGTCAGGATTGTTGTCTGCTGCTGCCATGATTTCTGCATATTCTTCAAAGGGCCTTCC
                      ____________________________________________________________
consensus             ACTGTCAGGATTGTTGTCTGCTGCTGCCATGATTTCTGCATATTCTTCAAAGGGCCTTCC
 
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rJMSF007E05+          TGATTATCAGCAGGAAAAGTATGCAGTGGTGACTCTAATCAACTGCCGTTCCATTCTTGA
rJMSF028I06+          TGATTATCAGCAGGAAAAGTATGCAGTGGTTACTCTAATCAACTGCCGTTCCATTCTTGA
rJMSF045P05+          TGATTATCAGCAGGAAAAGTATGCAGTGGTGACTCTAATCAACTGCCGTTCCATTCTTGA
rJMSF023H06+          TGATTATCAGCAGGAAAAGTATGCAGTGGTGACTCTAATCAACTGCCGTTCCATTCTTGA
rJMFF039O12+          TGATTATCAGCAGGAAAAGTATGCAGTGGTGACTCTAATCAACTGCCGTTCCATTCTTGA
rJMFF031L23+          TGATTATCAGCAGGAAAAGTATGCAGTGGTGACTCTAATCAACTGCCGTTCCATTCTTGA
                      ____________________________________________________________
consensus             TGATTATCAGCAGGAAAAGTATGCAGTGGTGACTCTAATCAACTGCCGTTCCATTCTTGA
 
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rJMSF007E05+          TCCAGTCATCAGCAGCAACCGGGCCGGGTTCTATAATTCTGGGATCTTGAACACACATGA
rJMSF028I06+          TCCAGTCATCAGCAGCAACCGGGCCGGGTTCTATAATTCTGGGATCTTGAACACACATGA
rJMSF045P05+          TCCAGTCATCAGCAGCAACCGGGCCGGGTTCTATAATTCTGGGATCTTGAACACACATGA
rJMSF023H06+          TCCAGTCATCAGCAGCAACCGGGCCGGGTTCTATAATTCTGGGATCTTGAACACACATGA
rJMFF039O12+          TCCAGTCATCAGCAGCAACCGGGCCGGGTTCTATAATTCTGGGATCTTGAACACACATGA
rJMFF031L23+          TCCAGTCATCAGCAGCAACCGGGCCGGGTTCTATAATTCTGGGATCTTGAACACACATGA
                      ____________________________________________________________
consensus             TCCAGTCATCAGCAGCAACCGGGCCGGGTTCTATAATTCTGGGATCTTGAACACACATGA
 
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rJMSF007E05+          CATCAGAGGAGGAGAAGAGCTGTGGGAGCTGGCAGGGAGAGCCTACACAGCCTTTGCAAA
rJMSF028I06+          CATCAGAGGAGGAGAAGAGCTGTGGGAGCTGGCAGGGAGAGCCTACACAGCCTTTGCAAA
rJMSF045P05+          CATCAGAGGAGGAGAAGAGCTGTGGGAGCTGGCAGGGAGAGCCTACACAGCCTTTGCAAA
rJMSF023H06+          CATCAGAGGAGGAGAAGAGCTGTGGGAGCTGGCAGGGAGAGCCTACACAGCCTTTGCAAA
rJMFF039O12+          CATCAGAGGAGGAGAAGAGCTGTGGGAGCTGGCAGGGAGAGCCTACACAGCCTTTGCAAA
rJMFF031L23+          CATCAGAGGAGGAGAAGAGCTGTGGGAGCTGGCAGGGAGAGCCTACACAGCCTTTGCAAA
                      ____________________________________________________________
consensus             CATCAGAGGAGGAGAAGAGCTGTGGGAGCTGGCAGGGAGAGCCTACACAGCCTTTGCAAA
 
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rJMSF007E05+          TGCTAAGAACAACAACAAACATTTCACAGACCTTGCTGATCTCAACTTCCTTATGAGCAA
rJMSF028I06+          TGCTAAGAACAACAACAAACATTTCACAGACCTTGCTGATCTCAACTTCCTTATGAGCAA
rJMSF045P05+          TGCTAAGAACAACAACAAACATTTCACAGACCTTGCTGATCTCAACTTCCTTATGAGCAA
rJMSF023H06+          TGCTAAGAACAACAACAAACATTTCACAGACCTTGCTGATCTCAACTTCCTTATGAGCAA
rJMFF039O12+          TGCTAAGAACAACAACAAACATTTCACAGACCTTGCTGATCTCAACTTCCTTATGAGCAA
rJMFF031L23+          TGCTAAGAACAACAACAAACATTTCACAGACCTTGCTGATCTCAACTTCCTTATGAGCAA
                      ____________________________________________________________
consensus             TGCTAAGAACAACAACAAACATTTCACAGACCTTGCTGATCTCAACTTCCTTATGAGCAA
 
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rJMSF007E05+          GGCTATAGAGAATCCTGGATTAACACCTTCATCTTCCCTGAGGACTTCTTTAATCTGTGT
rJMSF028I06+          GGCTATAGAGAATCCTGGATTAACACCTTCATCTTCCCTGAGGACTTCTTTAATCTGTGT
rJMSF045P05+          GGCTATAGAGAATCCTGGATTAACACCTTCATCTTCCCTGAGGACTTCTTTAATCTGTGT
rJMSF023H06+          GGCTATAGAGAATCCTGGATTAACACCTTCATCTTCCCTGAGGACTTCTTTAATCTGTGT
rJMFF039O12+          GGCTATAGAGAATCCTGGATTAACACCTTCATCTTCCCTGAGGACTTCTTTAATCTGTGT
rJMFF031L23+          GGCTATAGAGAATCCTGGATTAACACCTTCATCTTCCCTGAGGACTTCTTTAATCTGTGT
                      ____________________________________________________________
consensus             GGCTATAGAGAATCCTGGATTAACACCTTCATCTTCCCTGAGGACTTCTTTAATCTGTGT
 
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rJMSF007E05+          CTCTGAGGACACCCTGGTAGATGATCATGGATCTGGGGTGGAAGACTATGTTGTTTGCGC
rJMSF028I06+          CTCTGAGGACACCCTGGTAGATGATCATGGATCTGGGGTGGAAGACTATGTTGTTTGCGC
rJMSF045P05+          CTCTGAGGACACCCTGGTAGATGATCATGGATCTGGGGTGGAAGACTATGTTGTTTGCGC
rJMSF023H06+          CTCTGAGGACACCCTGGTAGATGATCATGGATCTGGGGTGGAAGACTATGTTGTTTGCGC
rJMFF039O12+          CTCTGAGGACACCCTGGTAGATGATCATGGATCTGGGGTGGAAGACTATGTTGTTTGCGC
rJMFF031L23+          CTCTGAGGACACCCTGGTAGATGATCATGGATCTGGGGTGGAAGACTATGTTGTTTGCGC
                      ____________________________________________________________
consensus             CTCTGAGGACACCCTGGTAGATGATCATGGATCTGGGGTGGAAGACTATGTTGTTTGCGC
 
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rJMSF007E05+          TTCAGCCCATGGCGTAGGCCCTAATATCGCGATATTCAACACAATTAGAGGTGGGGAATT
rJMSF028I06+          TTCAGCCCATGGCGTAGGCCCTAATATCGCGATATTCAACACAATTAGAGGTGGGGAATT
rJMSF045P05+          TTCAGCCCATGGCGTAGGCCCTAATATCGCGATATTCAACACAATTAGAGGTGGGGAATT
rJMSF023H06+          TTCAGCCCATGGCGTAGGCCCTAATATCGCGATATTCAACACAATTAGAGGTGGGGAATT
rJMFF039O12+          TTCAGCCCATGGCGTAGGCCCTAATATCGCGATATTCAACACAATTAGAGGTGGGGAATT
rJMFF031L23+          TTCAGCCCATGGCGTAGGCCCTAATATCGCGATATTCAACACAATTAGAGGTGGGGAATT
                      ____________________________________________________________
consensus             TTCAGCCCATGGCGTAGGCCCTAATATCGCGATATTCAACACAATTAGAGGTGGGGAATT
 
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rJMSF007E05+          AGACTGCACTTGCGTTTATCCATCACCATTGTACTCGAGGAAGCTTATGCTGGAGCTGAT
rJMSF028I06+          AGACTGCACTTGCGTTTATCCATCACCATTGTACTCGAGGAAGCTTATGCTGGAGCTGAT
rJMSF045P05+          AGACTGCACTTGCGTTTATCCATCACCATTGTACTCGAGGAAGCTTATGCTGGAGCTGAT
rJMSF023H06+          AGACTGCACTTGCGTTTATCCATCACCATTGTACTCGAGGAAGCTTATGCTGGAGCTGAT
rJMFF039O12+          AGACTGCACTTGCGTTTATCCATCACCATTGTACTCGAGGAAGCTTATGCTGGAGCTGAT
rJMFF031L23+          AGACTGCACTTGCGTTTATCCATCACCATTGTACTCGAGGAAGCTTATGCTGGAGCTGAT
                      ____________________________________________________________
consensus             AGACTGCACTTGCGTTTATCCATCACCATTGTACTCGAGGAAGCTTATGCTGGAGCTGAT
 
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rJMSF007E05+          TGATGGCATGAAGAGGATTCTTGTGGAGGCAAAGTGAGTAGATAGATTAACAGCTCTGTA
rJMSF028I06+          TGATGGCATGAAGAGGATTCTTGTGGAGGCAAAGTGAGTAGATAGATTAACAGCTCTGTA
rJMSF045P05+          TGATGGCATGAAGAGAATTCTTGTGGAGGCAAAGTGAGTAGATAGATTAACAGCTCTGTA
rJMSF023H06+          TGATGGCATGAAGAGGATTCTTGTGGAGGCAAAGTGAGTAGATAGATTAACAGCTCTGTA
rJMFF039O12+          TGATGGCATGAAGAGGATTCTTTTGGAGGCAAAGTGAGTAGATAGATTAACAGCTCTGTA
rJMFF031L23+          TGATGGCATGAAGAGGATTCTTGTGGAGGCAAAGTGAGTAGATAGATTAACAGCTCTGTA
                      ____________________________________________________________
consensus             TGATGGCATGAAGAGGATTCTTGTGGAGGCAAAGTGAGTAGATAGATTAACAGCTCTGTA
 
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rJMSF007E05+          ATCAAGTTGAACTCAAAACTTT                                      
rJMSF028I06+          ATCAAGTTGAACTCAAAACTTTTA                                    
rJMSF045P05+          ATCAAGTTGAACTCAAAACTTT                                      
rJMSF023H06+          ATCAAGTTGAACTCAAAACTTTTATTTGAGTTT                           
rJMFF039O12+          ATCAAGTTGAACTCAAAACTTTTATTTGAGTTTTGGACAACAGATAAA            
rJMFF031L23+          ATCAAGTTGAACTCAAAACTTTTATTTGAGTTTTGGACAACAGATAAATAAAAGGGCGAA
                      ____________________________________________________________
consensus             ATCAAGTTGAACTCAAAACTTTTATTTGAGTTTTGGACAACAGATAAATAAAAGGGCGAA