Contig 013747:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031C22Sequence589011572 (3)ref|XP_009790277.1|9e-65PREDICTED: synaptotagmin-5-like [Nicotiana sylvestris]789013747 (2)ref|XP_009631332.1|5e-108PREDICTED: synaptotagmin-5-like [Nicotiana tomentosiformis]
JMSF045E23Sequence668011572 (3)ref|XP_009790277.1|8e-69PREDICTED: synaptotagmin-5-like [Nicotiana sylvestris]723013747 (2)ref|XP_009631332.1|8e-99PREDICTED: synaptotagmin-5-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF031C22+ GTGAAAGAC
                      ____________________________________________________________
consensus GTGAAAGAC
 
. : . : . : . : . : . :
rJMSF045E23+ AGGTGAACTTGGAGCTGTTGTACTGC
rJMFF031C22+ TNGGAGGTTCAAAGAGACCAAAAATATCGGGGGCAGGTGAACTTGGAGCTGTTGTACTGC
                      ____________________________________________________________
consensus TNGGAGGTTCAAAGAGACCAAAAATATCGGGGGCAGGTGAACTTGGAGCTGTTGTACTGC
 
. : . : . : . : . : . :
rJMSF045E23+ CCCAATGGCATGAAGAATGGGTTTATGAACCCTTTTGTCGAGGACTACTCCATGACCGCA
rJMFF031C22+ CCCAATGGCATGAAGAATGGGTTTATGAACCCTTTTGTCGAGGACTACTCCATGACCGCA
                      ____________________________________________________________
consensus CCCAATGGCATGAAGAATGGGTTTATGAACCCTTTTGTCGAGGACTACTCCATGACCGCA
 
. : . : . : . : . : . :
rJMSF045E23+ TTAGAGAAAATTTTCGAAAGTGAGGCAGAAGCTACAGAAAATGGAGCTGATATGAACAAA
rJMFF031C22+ TTAGAGAAAATTTTCGAAAGTGAGGCAGAAGCTACAGAAAATGGAGCTGATATGAACAAA
                      ____________________________________________________________
consensus TTAGAGAAAATTTTCGAAAGTGAGGCAGAAGCTACAGAAAATGGAGCTGATATGAACAAA
 
. : . : . : . : . : . :
rJMSF045E23+ AGAAAGGAGGCCATTGTGCGAGGCGTACTTTCTGTTACTGTCATTTCTGCTGATGACCTT
rJMFF031C22+ AGAAAGGAGGCCATTGTGCGAGGCGTACTTTCTGTTACTGTCATTTCTGCTGATGACCTT
                      ____________________________________________________________
consensus AGAAAGGAGGCCATTGTGCGAGGCGTACTTTCTGTTACTGTCATTTCTGCTGATGACCTT
 
. : . : . : . : . : . :
rJMSF045E23+ GCTCCCACAGATCTAATGGGAAAGGCCGACCCGTATGTTGTGCTTTCTTTGAAGAAAGCC
rJMFF031C22+ GCTCCCACAGATCTAATGGGAAAGGCCGACCCGTATGTTGTGCTTTCTTTGAAGAAAGCC
                      ____________________________________________________________
consensus GCTCCCACAGATCTAATGGGAAAGGCCGACCCGTATGTTGTGCTTTCTTTGAAGAAAGCC
 
. : . : . : . : . : . :
rJMSF045E23+ GGAATCAAGAACAAAACCAGGGTTGTAACAGACAATCTGAATCCTGTCTGGAATCAGACT
rJMFF031C22+ GGAATCAAGAACAAAACCAGGGTTGTAACAGACAATCTGAATCCTGTCTGGAATCAGACT
                      ____________________________________________________________
consensus GGAATCAAGAACAAAACCAGGGTTGTAACAGACAATCTGAATCCTGTCTGGAATCAGACT
 
. : . : . : . : . : . :
rJMSF045E23+ TTCGACTTTGTTGTTGAGGATGGATTGCATGATATGCTGATTATAGAAGTATGGGATCAT
rJMFF031C22+ TTCGACTTTGTTGTTGAGGATGGATTGCATGATATGCTGATTATAGAAGTATGGGATCAT
                      ____________________________________________________________
consensus TTCGACTTTGTTGTTGAGGATGGATTGCATGATATGCTGATTATAGAAGTATGGGATCAT
 
. : . : . : . : . : . :
rJMSF045E23+ GACACGTTCGGAAAGGATTATATGGGGCGGTGCATCTTAACTTTGACGAGGGTTTTGTTA
rJMFF031C22+ GACACGTTCGGAAAGGATTATATGGGGCGGTGCATCTTAACTTTGACGAGGGTTTTGTTA
                      ____________________________________________________________
consensus GACACGTTCGGAAAGGATTATATGGGGCGGTGCATCTTAACTTTGACGAGGGTTTTGTTA
 
. : . : . : . : . : . :
rJMSF045E23+ GAAGGCGAATACAAAGAAACGTTCGAACTAGATGGAACGAAATCAGGAAGAATCAACCTG
rJMFF031C22+ GAAGGCGAATACAAAGAAACGTTCGAACTAGATGGAACGAAATCAGGAAGAATCAACCTG
                      ____________________________________________________________
consensus GAAGGCGAATACAAAGAAACGTTCGAACTAGATGGAACGAAATCAGGAAGAATCAACCTG
 
. : . : . : . : . : . :
rJMSF045E23+ CATCTCAGGTGGACACCACAGCCAATTTTCAGGGACACTTAGGTGTGAAATGGTGAATGC
rJMFF031C22+ CATCTCAGGTGGACACCACAGCCAATTTTCAGGGACACTTAGGTGTGAAATGGTGAATGC
                      ____________________________________________________________
consensus CATCTCAGGTGGACACCACAGCCAATTTTCAGGGACACTTAGGTGTGAAATGGTGAATGC
 
. : . : . : . : . : . :
rJMSF045E23+ AGCCTCATGTGAAGTTGCCCTCTTTGGCCCCCTTTCAAGCTCTGATCTGCAGAGGATGCT
rJMFF031C22+ AGCCTCATGTGAAGTTGCCCTCTTTGGCCCCCTTTCAAGCTCTGATCTGCAGAGGATGCT
                      ____________________________________________________________
consensus AGCCTCATGTGAAGTTGCCCTCTTTGGCCCCCTTTCAAGCTCTGATCTGCAGAGGATGCT
 
. : . : . : . : . : . :
rJMSF045E23+ GCTCTAATCTTATTTGGGGGACTATAAATAACATTTGGCTTGAAAGGTTGTGGAATTGAA
rJMFF031C22+ GCTCTAATCTTATTTGGGGGACTATAAATAACATTTGGCTTGAAAGGTTGTGGAATTGAA
                      ____________________________________________________________
consensus GCTCTAATCTTATTTGGGGGACTATAAATAACATTTGGCTTGAAAGGTTGTGGAATTGAA
 
. : . : . : . : . : . :
rJMSF045E23+ GTAAATATAATATCTGTTGTACGTATATATATAT
rJMFF031C22+ GTAAATATAATATCTGTTGTACGTATATATATATTAACTGTTTAATTAAAATCAGAGATT
                      ____________________________________________________________
consensus GTAAATATAATATCTGTTGTACGTATATATATATTAACTGTTTAATTAAAATCAGAGATT