| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003K16 | Sequence | 257 | 011924 (7) | 716 | 013745 (6) | emb|CDP19310.1| | 3e-42 | unnamed protein product [Coffea canephora] | |||
| JMFF030C10 | Sequence | 563 | 011924 (7) | ref|XP_009588392.1| | 2e-57 | PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Nicotiana tomentosiformis | 738 | 013745 (6) | emb|CDP19310.1| | 2e-10 | unnamed protein product [Coffea canephora] |
| JMFF036I03 | Sequence | 557 | 011924 (7) | ref|XP_009588392.1| | 6e-57 | PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Nicotiana tomentosiformis | 727 | 013745 (6) | emb|CDP19310.1| | 6e-45 | unnamed protein product [Coffea canephora] |
| JMFF037E22 | Sequence | 626 | 011924 (7) | ref|XP_009588392.1| | 1e-79 | PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Nicotiana tomentosiformis | 743 | 013745 (6) | emb|CDP19310.1| | 1e-47 | unnamed protein product [Coffea canephora] |
| JMFS145H12 | Sequence | 627 | 013745 (6) | emb|CDP19310.1| | 1e-69 | unnamed protein product [Coffea canephora] | |||||
| JMSF009K03 | Sequence | 371 | 011924 (7) | 767 | 013745 (6) | emb|CDP19310.1| | 1e-53 | unnamed protein product [Coffea canephora] | |||
This contig is upended
. : . : . : . : . : . :
JMFS145H12- TGAAACACAATGCCAACCTGAGTCACTAAGCTTCTCAAGATGTACAG
____________________________________________________________
consensus TGAAACACAATGCCAACCTGAGTCACTAAGCTTCTCAAGATGTACAG
. : . : . : . : . : . :
JMFS145H12- CTTGCATTTGAAGTAAATCTTGAGAAGCTTAGTGAAACACAATGCCAACCTGAGTCACAA
____________________________________________________________
consensus CTTGCATTTGAAGTAAATCTTGAGAAGCTTAGTGAAACACAATGCCAACCTGAGTCACAA
. : . : . : . : . : . :
JMFS145H12- TTGAAATTTATTATTGAAGCCTGGCAACAGTTGAATGCAGGAGAGTGCTAAAGTGGACAT
____________________________________________________________
consensus TTGAAATTTATTATTGAAGCCTGGCAACAGTTGAATGCAGGAGAGTGCTAAAGTGGACAT
. : . : . : . : . : . :
JMFS145H12- ATGCGTATGGATACTATCTTCCTGAGACTGAGCAAGCAAAAAGGCAGTTCTTCGAGTACT
____________________________________________________________
consensus ATGCGTATGGATACTATCTTCCTGAGACTGAGCAAGCAAAAAGGCAGTTCTTCGAGTACT
. : . : . : . : . : . :
JMFS145H12- TGCAAGGTGAGGCTGAGGCTGGTCTAGAGAGGCTTCATCAGTGTACTGAAAAGGAACTCC
rJMSF009K03+ AGGTGAGGCTGAGGCTGGTCTAGAGAGGCTTCATCAGTGTACTGAAAAGGAACTCC
rJMFF036I03+ GGCTGAGGCTGGTCTAGAGAGGCTTCATCAGTGTACTGAAAAGGAACTCC
rJMFF003K16+ CTAGAGAGGCTTCATCAGTGTACTGAAAAGGAACTCC
rJMFF037E22+ AGGTGAGGCTGAGGCTGGTCTAGAGAGGCTTCATCAGTGTACTGAAAAGGAACTCC
____________________________________________________________
consensus TGCAAGGTGAGGCTGAGGCTGGTCTAGAGAGGCTTCATCAGTGTACTGAAAAGGAACTCC
. : . : . : . : . : . :
JMFS145H12- AGAGTTATCTTAATGCAGAAGGTCCTTCCAAGGATTTTAATGATTTCCGTACAAAGCTTG
rJMSF009K03+ AGAGTTATCTTAATGCAGAAGGTCCTTCCAAGGATTTTAATGATTTCCGTACAAAGCTTG
rJMFF036I03+ AGAGTTATCTTAATGCAGAAGGTCCTTCCAAGGATTTTAATGATTTCCGTACAAAGCTTG
rJMFF003K16+ AGAGTTATCTTAATGCAGAAGGTCCTTCCAAGGATTTTAATGATTTCCGTACAAAGCTTG
rJMFF037E22+ AGAGTTATCTTAATGCAGAAGGTCCTTCCAAGGATTTTAATGATTTCCGTACAAAGCTTG
____________________________________________________________
consensus AGAGTTATCTTAATGCAGAAGGTCCTTCCAAGGATTTTAATGATTTCCGTACAAAGCTTG
. : . : . : . : . : . :
JMFS145H12- CTGGTCTGACAAGTGTGACTCGCAATTACTTTGAGAACTTGGTAAGGGCATTGGAAAATG
rJMSF009K03+ CTGGTCTGACAAGTGTGACTCGCAATTACTTTGAGAACTTGGTAAGGGCATTGGAAAATG
rJMFF036I03+ CTGGTCTGACAAGTGTGACTCGCAATTACTTTGAGAACTTGGTAAGGGCATTGGAAAATG
rJMFF003K16+ CTGGTCTGACAAGTGTGACTCGCAATTACTTTGAGAACTTGGTAAGGGCATTGGAAAATG
rJMFF037E22+ CTGGTCTGACAAGTGTGACTCGCAATTACTTTGAGAACTTGGTAAGGGCATTGGAAAATG
rJMFF030C10+ GTAAGGNCATTGGAAAATG
____________________________________________________________
consensus CTGGTCTGACAAGTGTGACTCGCAATTACTTTGAGAACTTGGTAAGGGCATTGGAAAATG
. : . : . : . : . : . :
JMFS145H12- GTCTATCAGATGTGGACTCACAAGGAGCATGTAGTAAGACAACGAGCTCAAAAAATGTAG
rJMSF009K03+ GTCTATCAGATGTGGACTCACAAGGAGCATGTAGTAAGACAACGAGCTCAAAAAATGTAG
rJMFF036I03+ GTCTATCAGATGTGGACTCACAAGGAGCATGTAGTAAGACAACGAGCTCAAAAAATGTAG
rJMFF003K16+ GTCTATCAGATGTGGACTCACAAGGAGCATGTAGTAAGACAACGAGCTCAAAAAATGTAG
rJMFF037E22+ GTCTATCAGATGTGGACTCACAAGGAGCATGTAGTAAGACAACGAGCTCAAAAAATGTAG
rJMFF030C10+ GTCTATCAGATGTGGACTCACAAGGAGCATGTAGTAAGACAACGAGCTCAAAAAATGTAG
____________________________________________________________
consensus GTCTATCAGATGTGGACTCACAAGGAGCATGTAGTAAGACAACGAGCTCAAAAAATGTAG
. : . : . : . : . : . :
JMFS145H12- CTGGGAGCAGCAAGGGGAAAGGAGGAGGTCGAGGAAAAGGTTCCTCCCGGGTAGGAGGTT
rJMSF009K03+ CTGGGAGCAGCAAGGGGAAAGGAGGAGGTCGAGGAAAAGGTTCCTCCCGGGTAGGAGGTT
rJMFF036I03+ CTGGGAGCAGCAAGGGGAAAGGAGGAGGTCGAGGAAAAGGTTCCTCCCGGGTAGGAGGTT
rJMFF003K16+ CTGGGAGCAGCAAGGGGAAAGGAGGAGGTCGAGGAAAAGGTTCCTCCCGGGTAGGAGGTT
rJMFF037E22+ CTGGGAGCAGCAAGGGGAAAGGAGGAGGTCGAGGAAAAGGTTCCTCCCGGGTAGGAGGTT
rJMFF030C10+ CTGGGAGCAGCAAGGGGAAAGGAGGAGGTCGAGGAAAAGGTTCCTCCCGGGTAGGAGGTT
____________________________________________________________
consensus CTGGGAGCAGCAAGGGGAAAGGAGGAGGTCGAGGAAAAGGTTCCTCCCGGGTAGGAGGTT
. : . : . : . : . : . :
JMFS145H12- CAAGCAAAACTACAGATGATTCAGGTGGTTGGGCCTGTGATCAGTGCACCTATATAAATT
rJMSF009K03+ CAAGCAAAACTACAGATGATTCAGGTGGTTGGGCCTGTGATCAGTGCACCTATATAAATT
rJMFF036I03+ CAAGCAAAACTACAGATGATTCAGGTGGTTGGGCCTGTGATCAGTGCACCTATATAAATT
rJMFF003K16+ CAAGCAAAACTACAGATGATTCAGGTGGTTGGGCCTGTGATCAGTGCACCTATATAAATT
rJMFF037E22+ CAAGCAAAACTACAGATGATTCAGGTGGTTGGGCCTGTGATCAGTGCACCTATATAAATT
rJMFF030C10+ CAAGCAAAACTACAGATGATTCAGGTGGTTGGGCCTGTGATCAGTGCACCTATATAAATT
____________________________________________________________
consensus CAAGCAAAACTACAGATGATTCAGGTGGTTGGGCCTGTGATCAGTGCACCTATATAAATT
. : . : . : . : . : . :
JMFS145H12- CCAAGTCTGCAGTTGCCTGTCAAATGTGCCACCATCGACG
rJMSF009K03+ CCAAGTCTGCAGTTGCCTGTCAAATGTGCCACCATCGACGATGATAATGGTGTGCACTGG
rJMFF036I03+ CCAAGTCTGCAGTTGCCTGTCAAATGTGCCACCATCGACGATGATAATGGTGTGCACTGG
rJMFF003K16+ CCAAGTCTGCAGTTGCCTGTCAAATGTGCCACCATCGACGATGATAATGGTGTGCACTGG
rJMFF037E22+ CCAAGTCTGCAGTTGCCTGTCAAATGTGCCACCATCGACGATGATAATGGTGTGCACTGG
rJMFF030C10+ CCAAGTCTGCAGTTGCCTGTCAAATGTGCCACCATCGACGATGATAATGGTGTGCACTGG
____________________________________________________________
consensus CCAAGTCTGCAGTTGCCTGTCAAATGTGCCACCATCGACGATGATAATGGTGTGCACTGG
. : . : . : . : . : . :
rJMSF009K03+ TGTTTTGCGATAATCTCCTCGATAAATAGAGGATGGAGCTTGCAAATGCAGTAGGTGGTG
rJMFF036I03+ TGTTTTGCGATAATCTCCTCGATAAATAGAGGATGGAGCTTGCAAATGCAGTAGGTGGTG
rJMFF003K16+ TGTTTTGCGATAATCTCCTCGATAAATAGAGGATGGAGCTTGCAAATGCAGTAGGTGGTG
rJMFF037E22+ TGTTTTGCGATAATCTCCTCGATAAATAGAGGATGGAGCTTGCAAATGCAGTAGGTGGTG
rJMFF030C10+ TGTTTTGCGATAATCTCCTCGATAAATAGAGGATGGAGCTTGCAAATGCAGTAGGTGGTG
____________________________________________________________
consensus TGTTTTGCGATAATCTCCTCGATAAATAGAGGATGGAGCTTGCAAATGCAGTAGGTGGTG
. : . : . : . : . : . :
rJMSF009K03+ CATGCACAACATGGACTATGTTGAAGGGGCATCTTGTTTGTGGTTTTACTGTAAATAGTT
rJMFF036I03+ CATGCACAACATGGACTATGTTGAAGGGGCATCTTGTTTGTGGTTTTACTGTAAATAGTT
rJMFF003K16+ CATGCACAACATGGACTATGTTGAAGGGGCATCTTGTTTGTGGTTTTACTGTAAATAGTT
rJMFF037E22+ CATGCACAACATGGACTATGTTGAAGGGGCATCTTGTTTGTGGTTTTACTGTAAATAGTT
rJMFF030C10+ CATGCACAACATGGACTATGTTGAAGGGGCATCTTGTTTGTGGTTTTACTGTAAATAGTT
____________________________________________________________
consensus CATGCACAACATGGACTATGTTGAAGGGGCATCTTGTTTGTGGTTTTACTGTAAATAGTT
. : . : . : . : . : . :
rJMSF009K03+ TGTGGGAGTTAATGAAAATCATGGGTGGGCCAGGGCCTGGGGGATAAATGCAAATTTACT
rJMFF036I03+ TGTGGGAGTTAATGAAAATCATGGGTGGGCCAGGGCCTGGGGGATAAATGCAAATTTACT
rJMFF003K16+ TGTGGGAGTTAATGAAAATCATGGGTGGGCCAGGGCCTGGGGGATAAATGCAAATTTACT
rJMFF037E22+ TGTGGGAGTTAATGAAAATCATGGGTGGGCCAGGGCCTGGGGGATAAATGCAAATTTACT
rJMFF030C10+ TGTGGGAGTTAATGAAAATCATGGGTGGGCCAGGGCCTGGGGGATAAATGCAAATTTACT
____________________________________________________________
consensus TGTGGGAGTTAATGAAAATCATGGGTGGGCCAGGGCCTGGGGGATAAATGCAAATTTACT
. : . : . : . : . : . :
rJMSF009K03+ CGTTTGTCTTATGTTAAGTTTTAGGTATTCAGGTCCTTGATATGTATAATGATGTATGGA
rJMFF036I03+ CGTTTGTCTTATGTTAAGTTTTAGGTATTCAGGTCCTTGATATGTATAATGATGTATGGA
rJMFF003K16+ CGTTTGTCTTATGTTAAGTTTTAGGTATTCAGGTCCTTGATATGTATAATGATGTATGGA
rJMFF037E22+ CGTTTGTCTTATGTTAAGTTTTAGGTATTCAGGTCCTTGATATGTATAATGATGTATGGA
rJMFF030C10+ CGTTTGTCTTATGTTAAGTTTTAGGTATTCAGGTCCTTGATATGTATAATGATGTATGGA
____________________________________________________________
consensus CGTTTGTCTTATGTTAAGTTTTAGGTATTCAGGTCCTTGATATGTATAATGATGTATGGA
. : . : . : . : . : . :
rJMSF009K03+ CTCTGGATTTTCTCTCTCTAAACCATTGTTTCTGGAACTGAGCAGCCCTGGTGGAAAGTT
rJMFF036I03+ CTCTGGATTTTCTCTCTCTAAACCATTGTTTCTGGAACTGAGCAG-CCTGGTGGAAAGTT
rJMFF003K16+ CTCTGGATTTTCTCTCTCTAAACCATTGTTTCTGGAACTGAGCAG-CCTGGTGGAAAGTT
rJMFF037E22+ CTCTGGATTTTCTCTCTCTAAACCATTGTTTCTGGAACTGAGCAG-CCTGGTGGAAAGTT
rJMFF030C10+ CTCTGGATTTTCTCTCTCTAAACCATTGTTTCTGGAACTGAGCAG-CCTGGTGGAAAGTT
____________________________________________________________
consensus CTCTGGATTTTCTCTCTCTAAACCATTGTTTCTGGAACTGAGCAG-CCTGGTGGAAAGTT
. : . : . : . : . : . :
rJMSF009K03+ CCTATCTCTGTAGCT
rJMFF036I03+ CCTATCTCTGTAGCTATA
rJMFF003K16+ CCTATCTCTGTAGCTATA
rJMFF037E22+ CCTATCTCTGTAGCTATA
rJMFF030C10+ CCTATCTCTGTAGCTATAAATACAAGGACCTTAAAAAGGACATACTGTTTTGTGTTTGCC
____________________________________________________________
consensus CCTATCTCTGTAGCTATAAATACAAGGACCTTAAAAAGGACATACTGTTTTGTGTTTGCC
. : . : . : . : . : . :
rJMFF030C10+ AAGTAGTTGTGGATGAATTGCTTGATGTATTTATTTATTATCTGCCGCCACTTACAATTA
____________________________________________________________
consensus AAGTAGTTGTGGATGAATTGCTTGATGTATTTATTTATTATCTGCCGCCACTTACAATTA
. : . : . : . : . : . :
rJMFF030C10+ GGTGGACACGAGTCTCTTGACGTTCAAGTTTCAAATGAAAATATTACATGGACTCAAATT
____________________________________________________________
consensus GGTGGACACGAGTCTCTTGACGTTCAAGTTTCAAATGAAAATATTACATGGACTCAAATT