Contig 013741:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029A14Sequence329019538ref|XP_009057505.1|3e-16hypothetical protein LOTGIDRAFT_163196 [Lottia gigantea] gb|ESO91835.1| hypothet766013741 (4)ref|XP_009589417.1|9e-103PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal-like [Nicotiana toment
JMFS008H04Sequence598013741 (4)ref|XP_009589417.1|4e-111PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal-like [Nicotiana toment
JMSF009C22Sequence319010594 (4)ref|XP_009597891.1|6e-15PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal-like [Nicotiana toment778013741 (4)ref|XP_009589417.1|2e-147PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal-like [Nicotiana toment
JMSF019D09Sequence225010594 (4)ref|XP_009597891.1|9e-10PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal-like [Nicotiana toment806013741 (4)gb|KJB12548.1|6e-107hypothetical protein B456_002G023900 [Gossypium raimondii]

Alignment

This contig is upended


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rJMSF009C22+                            CAAGTCCAGCATGTGAAATCAAGCTTGTTGATGTTCCAGAGA
rJMSF019D09+                              AGTCCAGCATGGGAAATCCAGCTTGTTGATGTTCCAGAGA
                      ____________________________________________________________
consensus                               CAAGTCCAGCATGTGAAATCCAGCTTGTTGATGTTCCAGAGA
 
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rJMSF009C22+          TGAATTATACATTTGAGGATCAACCTCATCCTCGTGGAGAGGTTTGTGTCAGGGGCCCCA
rJMSF019D09+          TGAATTATACATCTGAGGATCAACCTCATCCTCGTGGAGAGGTTTGTGTCAGGGGCCCCA
                      ____________________________________________________________
consensus             TGAATTATACATTTGAGGATCAACCTCATCCTCGTGGAGAGGTTTGTGTCAGGGGCCCCA
 
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JMFS008H04-                                                          GTTGACAAAGATG
rJMSF009C22+          TTGTTTTCCAAGGCTATTACAAAGATGAAGTGCAAACGAGAGAGGTAGTTGACAAAGATG
rJMSF019D09+          TTGTTTTCCAAGGCTATTACAAAGATGAAGTGCAAACGAGAGAGGTAGTTGACAAAGATG
                      ____________________________________________________________
consensus             TTGTTTTCCAAGGCTATTACAAAGATGAAGTGCAAACGAGAGAGGTAGTTGACAAAGATG
 
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JMFS008H04-           GTTGGCTACATACTGGAGATATTGGGTTGTGGTTACCTGGAGGCCGCTTGAAGATTATCG
rJMSF009C22+          GTTGGCTACATACTGGAGATATTGGGTTGTGGTTACCTGGAGGCCGCTTGAAGATTATCG
rJMSF019D09+          GTTGGCTACATACTGGAGATATTGGGTTGTGGTTACCTGGAGGCCGCTTGAAGATTATCG
rJMFF029A14+                        GGAGATATTGGGTTGTGGTTACCTGGAGGCCGCTTGAAGATTATCG
                      ____________________________________________________________
consensus             GTTGGCTACATACTGGAGATATTGGGTTGTGGTTACCTGGAGGCCGCTTGAAGATTATCG
 
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JMFS008H04-           ACAGGAAAAAGAACATATTTAAGTTGGCTCAGGGTGAATACATAGCTCCGGAGAAAATTG
rJMSF009C22+          ACAGGAAAAAGAACATATTTAAGTTGGCTCAGGGTGAATACATAGCTCCGGAGAAAATTG
rJMSF019D09+          ACAGG-AAAAGAACATATTTAAGTTGGCTCAGGGTGAATACATAGCTCCGGAGAAAATTG
rJMFF029A14+          ACAGGAAAAAGAACATATTTAAGTTGGCTCAGGGTGAATACATAGCTCCGGAGAAAATTG
                      ____________________________________________________________
consensus             ACAGGAAAAAGAACATATTTAAGTTGGCTCAGGGTGAATACATAGCTCCGGAGAAAATTG
 
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JMFS008H04-           AGAATGTTTATGCCAAGTGCAAATTTGTTGCACAATGCTTTGTATACGGTGATAGCTTGA
rJMSF009C22+          AGAATGTTTATGCCAAGTGCAAATTTGTTGCACAATGCTTTGTATACGGTGATAGCTTGA
rJMSF019D09+          AGAATGTTTATGCCAAGTGCAAATTTGTTGCACAATGCTTTGTATACGGTGATAGCTTGA
rJMFF029A14+          AGAATGTTTATGCCAAGTGCAAATTTGTTGCACAATGCTTTGTATACGGTGATAGCTTGA
                      ____________________________________________________________
consensus             AGAATGTTTATGCCAAGTGCAAATTTGTTGCACAATGCTTTGTATACGGTGATAGCTTGA
 
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JMFS008H04-           ACTCGTCTCTTGTATCTATAGTTTGTATAGATCCCGATGTGTTGAAGGAATGGGCTTCAT
rJMSF009C22+          ACTCGTCTCTTGTATCTATAGTTTGTATAGATCCCGATGTGTTGAAGGAATGGGCTTCAT
rJMSF019D09+          ACTCGTCTCTTGTATCTATAGTTTGTATAGATCCCGATGTGTTGAAGGAATGGGCTTCAT
rJMFF029A14+          ACTCGTCTCTTGTATCTATAGTTTGTATAGATCCCGATGTGTTGAAGGAATGGGCTTCAT
                      ____________________________________________________________
consensus             ACTCGTCTCTTGTATCTATAGTTTGTATAGATCCCGATGTGTTGAAGGAATGGGCTTCAT
 
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JMFS008H04-           CTGAGGGCATTAAGTATGAAAGTTTGCAACAATTATGCAACGATCCGAGAGCCAAAGCTG
rJMSF009C22+          CTGAGGGCATTAAGTATGAAAGTTTGCAACAATTATGCAACGATCCGAGAGCCAAAGCTG
rJMSF019D09+          CTGAGGGCATTAAGTATGAAAGTTTGCAACAATTATGCAACGATCCGAGAGCCAAAGCTG
rJMFF029A14+          CTGAGGGCATTAAGTATGAAAGTTTGCAACAATTATGCAACGATCCGAGAGCCAAAGCTG
                      ____________________________________________________________
consensus             CTGAGGGCATTAAGTATGAAAGTTTGCAACAATTATGCAACGATCCGAGAGCCAAAGCTG
 
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JMFS008H04-           CCGTTCTAGCAGACATGGACGCCATAGGAAGGGAAGCTCAGTTGAGAGGCTTTGAATTCG
rJMSF009C22+          CCGTTCTAGCAGACATGGACGCCATAGGAAGGGAAGCTCAGTTGAGAGGCTTTGAATTCG
rJMSF019D09+          CCGTTCTAGCAGACATGGACGCCATAGGAAGGGAAGCTCAGTTGAGAGGCTTTGAATTCG
rJMFF029A14+          CCGTTCTAGCAGACATGGACGCCATAGGAAGGGAAGCTCAGTTGAGAGGCTTTGAATTCG
                      ____________________________________________________________
consensus             CCGTTCTAGCAGACATGGACGCCATAGGAAGGGAAGCTCAGTTGAGAGGCTTTGAATTCG
 
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JMFS008H04-           CAAAAGCTGTCACCTTAGTGGTCGAGCCTTTCACAGTCGAGAATGGTCTTCTTACACCCA
rJMSF009C22+          CAAAAGCTGTCACCTTAGTGGTCGAGCCTTTCACAGTCGAGAATGGTCTTCTTACACCCA
rJMSF019D09+          CAAAAGCTGTCACCTTAGTGGTCGAGCCTTTCACAGTCGAGAATGGTCTTCTTACACCCA
rJMFF029A14+          CAAAAGCTGTCACCTTAGTGGTCGAGCCTTTCACAGTCGAGAATGGTCTTCTTACACCCA
                      ____________________________________________________________
consensus             CAAAAGCTGTCACCTTAGTGGTCGAGCCTTTCACAGTCGAGAATGGTCTTCTTACACCCA
 
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JMFS008H04-           CATTCAAGGTGAAGAGGCCACAGGCAAAAGCATACTTTGCACAAGCAATATCTGAAATGT
rJMSF009C22+          CATTCAAGGTGAAGAGGCCACAGGCAAAAGCATACTTTGCACAAGCAATATCTGAAATGT
rJMSF019D09+          CATTCAAGGTGAAGAGGCCACAGGCAAAAGCATACTTTGCACAAGCAATATCTGAAATGT
rJMFF029A14+          CATTCAAGGTGAAGAGGCCACAGGCAAAAGCATACTTTGCACAAGCAATATCTGAAATGT
                      ____________________________________________________________
consensus             CATTCAAGGTGAAGAGGCCACAGGCAAAAGCATACTTTGCACAAGCAATATCTGAAATGT
 
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JMFS008H04-           ACAATGAGCTGTCGAGATCCGATCCTGCGCAGAAAGTTCTATAGTCACCAAACACTCAAA
rJMSF009C22+          ACAATGAGCTGTCGAGATCCGATCCTGCGCAGAAAGTTCTATAGTCACCAAACACTCAAA
rJMSF019D09+          ACAATGAGCTGTCGAGATCCGATCCTGCGCAGAAAGTTCTATAGTCACCAAACACTCAAA
rJMFF029A14+          ACAATGAGCTGTCGAGATCCGATCCTGCGCAGAAAGTTCTATAGTCACCAAACACTCAAA
                      ____________________________________________________________
consensus             ACAATGAGCTGTCGAGATCCGATCCTGCGCAGAAAGTTCTATAGTCACCAAACACTCAAA
 
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JMFS008H04-           CTTTACCCTCTTATTTTAATAAACTAGTTACACCTTACTTAATTG               
rJMSF009C22+          CTTTACCCTCTTATTTTAATAAACTAGTTACACCTTACTTAATTGTTGTATTTGCAACTT
rJMSF019D09+          CTTTACCCTCTTATTTTAATAAACTAGTTACACCTTACTTAATTGTTGTATTTGCAACTT
rJMFF029A14+          CTTTACCCTCTTATTTTAATAAACTAGTTACACCTTACTTAATTGTTGTATTTGCAACTT
                      ____________________________________________________________
consensus             CTTTACCCTCTTATTTTAATAAACTAGTTACACCTTACTTAATTGTTGTATTTGCAACTT
 
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rJMSF009C22+          CCAACAAAACAGCATT                                            
rJMSF019D09+          CCAACAAAACAGCATTTTATTTTTTATTTTTATAG                         
rJMFF029A14+          CCAACAAAACAGCATTTTATTTTTTATTTTTATAGCCATGTGTATGGGCTGTACCATTTT
                      ____________________________________________________________
consensus             CCAACAAAACAGCATTTTATTTTTTATTTTTATAGCCATGTGTATGGGCTGTACCATTTT
 
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rJMFF029A14+          CGAAGAAAATATATATAGTGTTACAGTGAAGGTGATGGTTTTAATAATTCTAGCCTTAAT
                      ____________________________________________________________
consensus             CGAAGAAAATATATATAGTGTTACAGTGAAGGTGATGGTTTTAATAATTCTAGCCTTAAT
 
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rJMFF029A14+          CAGGAATTTCCCTCCCTGAATAGAAATTCTATTTTTATTTTTTGAAATATNAAAAGTGAT
                      ____________________________________________________________
consensus             CAGGAATTTCCCTCCCTGAATAGAAATTCTATTTTTATTTTTTGAAATATNAAAAGTGAT