| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004M15 | Sequence | 392 | 000943 (10) | emb|CDO98277.1| | 2e-09 | unnamed protein product [Coffea canephora] | 729 | 013740 (6) | ref|XP_009792212.1| | 4e-108 | PREDICTED: respiratory burst oxidase homolog protein D-like isoform X2 [Nicotia |
| JMFF028O23 | Sequence | 552 | 001785 (22) | ref|XP_009605819.1| | 9e-53 | PREDICTED: lanC-like protein GCL1 [Nicotiana tomentosiformis] | 636 | 013740 (6) | ref|XP_009610987.1| | 2e-15 | PREDICTED: respiratory burst oxidase homolog protein D-like isoform X1 [Nicotia |
| JMFF038P07 | Sequence | 547 | 001785 (22) | ref|XP_009605819.1| | 1e-52 | PREDICTED: lanC-like protein GCL1 [Nicotiana tomentosiformis] | 519 | 013740 (6) | |||
| JMSF005D18 | Sequence | 321 | 020968 | ref|XP_009586692.1| | 3e-05 | PREDICTED: ABC transporter G family member 21-like [Nicotiana tomentosiformis] | 373 | 013740 (6) | |||
| JMSF005F20 | Sequence | 320 | 000943 (10) | emb|CDO98277.1| | 9e-09 | unnamed protein product [Coffea canephora] | 390 | 013740 (6) | |||
| JMSF044E21 | Sequence | 719 | 000943 (10) | ref|NP_001275453.1| | 8e-32 | respiratory burst oxidase homolog protein C [Solanum tuberosum] sp|Q2HXL0.2|RBOH | 312 | 013740 (6) | ref|XP_009421001.1| | 1e-06 | PREDICTED: respiratory burst oxidase homolog protein B [Musa acuminata subsp. m |
This contig is upended
. : . : . : . : . : . :
rJMFF004M15+ TACGGAGCACCAGCACAAG
____________________________________________________________
consensus TACGGAGCACCAGCACAAG
. : . : . : . : . : . :
rJMFF004M15+ ACTACAAGAAATACGACGTGGTCCTGCTGGTAGGGCTGGGGATCGGAGCCACGCCCATGA
____________________________________________________________
consensus ACTACAAGAAATACGACGTGGTCCTGCTGGTAGGGCTGGGGATCGGAGCCACGCCCATGA
. : . : . : . : . : . :
rJMFF004M15+ TCAGCATCGTGAAGGACATCGTGAACAACATGACGGCGGCGGATGAAGAAGAGGGCGGCG
____________________________________________________________
consensus TCAGCATCGTGAAGGACATCGTGAACAACATGACGGCGGCGGATGAAGAAGAGGGCGGCG
. : . : . : . : . : . :
rJMFF004M15+ TGGAGAACGGCGGCGCCGCCACCAAGAACTTCAGGACCAAAAAGGCCTACTTCTACTGGG
____________________________________________________________
consensus TGGAGAACGGCGGCGCCGCCACCAAGAACTTCAGGACCAAAAAGGCCTACTTCTACTGGG
. : . : . : . : . : . :
rJMFF004M15+ TCACAAGAGAGCAAGGGTCATTTGATTGGTTCAAGGGGATCATGAACGAAGTTGCGGAGA
____________________________________________________________
consensus TCACAAGAGAGCAAGGGTCATTTGATTGGTTCAAGGGGATCATGAACGAAGTTGCGGAGA
. : . : . : . : . : . :
rJMFF004M15+ TGGATAATAGGGGAGTTATAGAGATGCATAATTATTGCACCAGCGTTTATGAAGAGGGAG
____________________________________________________________
consensus TGGATAATAGGGGAGTTATAGAGATGCATAATTATTGCACCAGCGTTTATGAAGAGGGAG
. : . : . : . : . : . :
rJMFF004M15+ ACGCTCGTTCTGCTCTTATCACCATGTTGCAGTCCCTCCACCACGCCAAGAACGGCGTCG
____________________________________________________________
consensus ACGCTCGTTCTGCTCTTATCACCATGTTGCAGTCCCTCCACCACGCCAAGAACGGCGTCG
. : . : . : . : . : . :
rJMFF004M15+ ACATTGTTTCCGGCACCCGCGTGAAGTCCCATTTCGCCAAGCCCAACTGGCGTAACGTCT
____________________________________________________________
consensus ACATTGTTTCCGGCACCCGCGTGAAGTCCCATTTCGCCAAGCCCAACTGGCGTAACGTCT
. : . : . : . : . : . :
rJMFF004M15+ ACAAACGCATCGCTCTCAACCACACCGATAGCAAAGTTGGGGTTTTCTATTGTGGGGCAC
rJMFF028O23+ CACCGATAGCAAAGTTGGGGTTTTCTATTGTGGGGCAC
____________________________________________________________
consensus ACAAACGCATCGCTCTCAACCACACCGATAGCAAAGTTGGGGTTTTCTATTGTGGGGCAC
. : . : . : . : . : . :
rJMFF004M15+ CCGCACTGACAACAGAGCTAAGACAATTAGCCTTGGATTTTTCACGCAAGACATCCACCA
rJMSF044E21+ ACTGACAACAGAGCTAAGACAATTAGCCNTGGATTTTTCACGCAAGACATCCACCA
rJMFF028O23+ CCGCACTGACAACAGAGCTAAGACAATTAGCCTTGGATTTTTCACGCAAGACATCCACCA
____________________________________________________________
consensus CCGCACTGACAACAGAGCTAAGACAATTAGCCTTGGATTTTTCACGCAAGACATCCACCA
. : . : . : . : . : . :
rJMFF004M15+ AATTTGACTTCCATAAAGAAAACTTTTG-ACCATGGGACACCATTCATCATCATCATCCA
rJMFF038P07+ TTGACCATGGGNCNCCATTCATCATCATCATCCA
rJMSF044E21+ AATTTGACTTCCATAAAGAAAACTTTTGNGCCATGGGGCACCATTCATCATCATCATCCC
rJMFF028O23+ AATTTGACTTCCATAAAGAAAACTTTTG-ACCATGGGACACCATTCATCATCATCATCCA
____________________________________________________________
consensus AATTTGACTTCCATAAAGAAAACTTTTGGACCATGGGACACCATTCATCATCATCATCCA
. : . : . : . : . : . :
rJMFF004M15+ ACCAAACATTATCCAAGCTAAGACAACTTGGTCCAAATACTAGAATAATGCATATATACA
rJMFF038P07+ ACCAAACATTATCCAAGCTAAGACAACTTGGTCCAAATACTAGAATAATGCATATATACA
rJMSF044E21+ ACCAANCATTATNCAAGCTANGACAANTTGGTNCAAATANTAGAATAATGCATATATACA
rJMFF028O23+ ACCAAACATTATCCAAGCTAAGACAACTTGGTCCAAATACTAGAATAATGCATATATACA
____________________________________________________________
consensus ACCAAACATTATCCAAGCTAAGACAACTTGGTCCAAATACTAGAATAATGCATATATACA
. : . : . : . : . : . :
rJMFF004M15+ TGCATGCATCTACAACTGCTACTCCCATCCAGTCTCTCTT
rJMSF005D18+ CCCATCCAGTCTCTNTT-TGTACAGAGNNTCTCGCTT
rJMFF038P07+ NGCATGCATCTACANCTGCTACTCCCATCCAGTCTCTCTT-TGTACAGAGATTCTTGCTT
rJMSF005F20+ CATCTACAANTGCTACTCCCATCCAGTCTNTCTT-TGTACAGAGATTCTTGCTT
rJMSF044E21+ TGCATGCATCTACAACTGCTACTCCCATCCAGTCTCTCTTCTGTACAGAGANTCTTGCTN
rJMFF028O23+ TGCATGCATCTACAACTGCTACTCCCATCCAGTCTCTCTT-TGTACAGAGATTCTTGCTT
____________________________________________________________
consensus TGCATGCATCTACAACTGCTACTCCCATCCAGTCTCTCTT-TGTACAGAGATTCTTGCTT
. : . : . : . : . : . :
rJMSF005D18+ GCTGATTAAATTGGTATCTTATGTGTAATAATACGTTAGTACGTTTGAATCTAGTTACGA
rJMFF038P07+ GCTGATTAAATTGGTATCTTATGTGTAATAATACGTTAGTACGTTTGAATCTAGTTACGA
rJMSF005F20+ GCTGATTAAATTGGTATCTNATGTGTAATAATACGTTAGTACGTTTGAATCTAGTTANGA
rJMSF044E21+ GCTGATTAAATTGGTATCTTA
rJMFF028O23+ GCTGATTAAATTGGTATCTTATGTGTAATAATACGTTAGTACGTTTGAATCTAGTTACGA
____________________________________________________________
consensus GCTGATTAAATTGGTATCTTATGTGTAATAATACGTTAGTACGTTTGAATCTAGTTACGA
. : . : . : . : . : . :
rJMSF005D18+ ATNTTTCAAGAATAGTTNGTCCATTGACATATAACAAAAAGTTNGTGGAATCAAGGATCA
rJMFF038P07+ ATATTTCAAGAATAGTTTGTCCATTGACATATAACAAAAAGTTGGTGGAATCAAGGATCA
rJMSF005F20+ ATATTTCAAGAATAGTTNGTCCATTGACATATAACAAAAAGTTGGTGGAATCAAGGATCA
rJMFF028O23+ ATATTTCAAGAATAGTTTGTCCATTGACATATAACAAAAAGTTGGTGGAATCAAGGATCA
____________________________________________________________
consensus ATATTTCAAGAATAGTTTGTCCATTGACATATAACAAAAAGTTGGTGGAATCAAGGATCA
. : . : . : . : . : . :
rJMSF005D18+ CCCACTAATAGAGTAGTGTTACTAGAATATTAAATTAGTTCAAAGTGNTCAATAAGNCTA
rJMFF038P07+ CCCACTAATAGAGTAGTGTTATTAGAATATTAAATTAGTTCAAAGTGTTCAATAAGATTA
rJMSF005F20+ CCCACTAATAGAGTAGTGNTANTAGAATATTAAATTAGTTCAAAGTGTTCAATAAGAGTA
rJMFF028O23+ CCCACTAATAGAGTAGTGTTATTAGAATATTAAATTAGTTCAAAGTGTTCAATAAGATTA
____________________________________________________________
consensus CCCACTAATAGAGTAGTGTTATTAGAATATTAAATTAGTTCAAAGTGTTCAATAAGATTA
. : . : . : . : . : . :
rJMSF005D18+ CGTCGTGAAGGTGTCATGGTGATGTCACTTAGAAATAGTTGTTATTTTTTTATTGANGAN
rJMFF038P07+ CGTCGTGAAGGTGTCATGGTGATGTCACTTAGAAATAGTTGTTATTTTTTTATTGAAGAG
rJMSF005F20+ CGTCGTGAAGGTGTCANGGTGATGTCACTTAGAAATAGTTGTTATTTTTTTATCGAAGAG
rJMFF028O23+ CGTCGTGAAGGTGTCATGGTGATGTCACTTAGAAATAGTTGTTATTTTTTTATTGAAGAG
____________________________________________________________
consensus CGTCGTGAAGGTGTCATGGTGATGTCACTTAGAAATAGTTGTTATTTTTTTATTGAAGAG
. : . : . : . : . : . :
rJMSF005D18+ ATCAAACTTTAGAAATATATATCCCCTTGTCTACTA
rJMFF038P07+ ATCAAACTTTAGAAATATATATCCCCTTGTCTACTAGGCAAATTTATGCATACATGTATG
rJMSF005F20+ ATCAAACTTTAGAAATATATATCCCCTTGTCTACTA
rJMFF028O23+ ATCAAACTTTAGAAATATATATCCCCTTGTCTACTAGGCAAATTTATGCATACATGTATG
____________________________________________________________
consensus ATCAAACTTTAGAAATATATATCCCCTTGTCTACTAGGCAAATTTATGCATACATGTATG
. : . : . : . : . : . :
rJMFF038P07+ CATTATCACTAGGCCAGTTTTGTGTATTATAAAGTTACAATTT
rJMFF028O23+ CATTATCACTAGGCCAGTTTTGTGTATTATAAAGTTACAATTTCAAGTGATACAAAGAAA
____________________________________________________________
consensus CATTATCACTAGGCCAGTTTTGTGTATTATAAAGTTACAATTTCAAGTGATACAAAGAAA