Contig 013733:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027E19Sequence351013733 (2)gb|KJB70589.1|8e-13hypothetical protein B456_011G081800 [Gossypium raimondii]
JMFN018D03Sequence462013733 (2)ref|XP_009594192.1|74.7PREDICTED: uncharacterized protein LOC104090725 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN018D03+ AATAAGGAATATAAGTATA
                      ____________________________________________________________
consensus AATAAGGAATATAAGTATA
 
. : . : . : . : . : . :
JMFN018D03+ TTTAAATATAATAAGTATGATTATCACAAATTCATAATACTAGCTCATATATTACTGAGC
                      ____________________________________________________________
consensus TTTAAATATAATAAGTATGATTATCACAAATTCATAATACTAGCTCATATATTACTGAGC
 
. : . : . : . : . : . :
JMFN018D03+ GATGCCAATTCAAGAAACACCATAGGAAATACTTGTATATAAGTATGTATGAGCGTATAT
                      ____________________________________________________________
consensus GATGCCAATTCAAGAAACACCATAGGAAATACTTGTATATAAGTATGTATGAGCGTATAT
 
. : . : . : . : . : . :
JMFN018D03+ ATCATGTTCCTCTCATAAGCATTTGTTCGTAGTTCTCAATGGACTCGAGCCTCTGAAGGA
rJMFF027E19- TCATAAGCATTTGTTCGTAGTTCTCAATGGACTCGAGCCTCTGAAGGA
                      ____________________________________________________________
consensus ATCATGTTCCTCTCATAAGCATTTGTTCGTAGTTCTCAATGGACTCGAGCCTCTGAAGGA
 
. : . : . : . : . : . :
JMFN018D03+ GCAGCTGATGCTTAAACTTTTGGATGAATGCTTCCGCACTTTGGTTTATATCTTCCGTCG
rJMFF027E19- GCAGCTGATGCTTAAACTTTTGGATGAATGCTTCCGCACTTTGGTTTATATCTTCCGTCG
                      ____________________________________________________________
consensus GCAGCTGATGCTTAAACTTTTGGATGAATGCTTCCGCACTTTGGTTTATATCTTCCGTCG
 
. : . : . : . : . : . :
JMFN018D03+ TCGGCTTTCGTTCCAGCTTCTTTGCCGGTGGCGGCGCAACCGCAGCCTTCTTTGAGGCCA
rJMFF027E19- TCGGCTTTCGTTCCAGCTTCTTTGCCGGTGGCGGCGCAACCGCAGCCTTCTTTGAGGCCA
                      ____________________________________________________________
consensus TCGGCTTTCGTTCCAGCTTCTTTGCCGGTGGCGGCGCAACCGCAGCCTTCTTTGAGGCCA
 
. : . : . : . : . : . :
JMFN018D03+ CGGCGGTGCTTTTCCTCAGATCCATAACTGAACTCTCGCTTCTATCCTCTTCGATGCCGC
rJMFF027E19- CGGCGGTGCTTTTCTTCAGATCCATAACTGAACTCTCGCTTCTATCCTCTTCGATGCCGC
                      ____________________________________________________________
consensus CGGCGGTGCTTTTCTTCAGATCCATAACTGAACTCTCGCTTCTATCCTCTTCGATGCCGC
 
. : . : . : . : . : . :
JMFN018D03+ CGGCCTTCTGGCTGCTGCGACTGCGATTGTATTGATGATCAGATCTCACGGACTTCTTCT
rJMFF027E19- CGGCCTTCTGGCTGCTGCGACTGCGATTGTATTGATGATCAGATCTCACGGACTTCTTCT
                      ____________________________________________________________
consensus CGGCCTTCTGGCTGCTGCGACTGCGATTGTATTGATGATCAGATCTCACGGACTTCTTCT
 
. : . : . : . : . : . :
JMFN018D03+ CCATAACCGCTTAGCTTAGCTTC
rJMFF027E19- CCATAACCGCTTAGCTTAGCTTCTTTTTTTTTTTTTTTTTTTTNNGGGGGGNGGGGGNNA
                      ____________________________________________________________
consensus CCATAACCGCTTAGCTTAGCTTCTTTTTTTTTTTTTTTTTTTTNNGGGGGGNGGGGGNNA