Contig 013727:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026F05Sequence635013727 (2)ref|XP_010926499.1|2e-51PREDICTED: 60S ribosomal protein L26-2-like [Elaeis guineensis]718013727 (2)ref|XP_010926499.1|1e-38PREDICTED: 60S ribosomal protein L26-2-like [Elaeis guineensis]

Alignment

This contig is upended


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JMFF026F05-                            CTTCGCACAGCGTAATCCCTAATTCCCAATCAGCCGCGCTAAA
                      ____________________________________________________________
consensus                              CTTCGCACAGCGTAATCCCTAATTCCCAATCAGCCGCGCTAAA
 
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JMFF026F05-           CCTCAACGCCTCCGCCGCCGTCGTCCAAATCGGAGAGAATGAAGTACAACCCCCGCGTTT
                      ____________________________________________________________
consensus             CCTCAACGCCTCCGCCGCCGTCGTCCAAATCGGAGAGAATGAAGTACAACCCCCGCGTTT
 
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JMFF026F05-           CCAGCTCTCGCCGGAAGTCCCGGAAGGCGCACTTCACCGCGCCGTCCAGCGTGCGCAGGG
                      ____________________________________________________________
consensus             CCAGCTCTCGCCGGAAGTCCCGGAAGGCGCACTTCACCGCGCCGTCCAGCGTGCGCAGGG
 
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JMFF026F05-           TGCTGATGAGCGCGCCCCTCTCGTCGGGCCTCCGGAACAAGTACAACGTCCGTTCAATCC
                      ____________________________________________________________
consensus             TGCTGATGAGCGCGCCCCTCTCGTCGGGCCTCCGGAACAAGTACAACGTCCGTTCAATCC
 
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JMFF026F05-           CCGTCCGGAAGGACGACGAGGTTATGGTGGTGCGCGGGACGTACAAGGGCCGCGACGGGA
rJMFF026F05+                GGAAGGACGACGAGGTTATGGTGGTGCGCGGGACGTACAAGGGCCGCGACGGGA
                      ____________________________________________________________
consensus             CCGTCCGGAAGGACGACGAGGTTATGGTGGTGCGCGGGACGTACAAGGGCCGCGACGGGA
 
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JMFF026F05-           AGGTCGTCCAGGTGTACCGTAAGAAATGGGTCATCCATATCGAGCGGATCACCCGGGAGA
rJMFF026F05+          AGGTCGTCCAGGTGTACCGTAAGAAATGGGTCATCCATATCGAGCGGATCACCCGGGAGA
                      ____________________________________________________________
consensus             AGGTCGTCCAGGTGTACCGTAAGAAATGGGTCATCCATATCGAGCGGATCACCCGGGAGA
 
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JMFF026F05-           AGGTCAATGGCTCGACCGTCAACGTGGGTATCCACCCGTCCAAGGTCGTGGTCACCAAGC
rJMFF026F05+          AGGTCAATGGCTCGACCGTCAACGTGGGTATCCACCCGTCCAAGGTCGTGGTCACCAAGC
                      ____________________________________________________________
consensus             AGGTCAATGGCTCGACCGTCAACGTGGGTATCCACCCGTCCAAGGTCGTGGTCACCAAGC
 
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JMFF026F05-           TGAAGCTGGACAAGGATCGCAAGGCTTTGCTCGACCGGAAGGCCAAAGGCAGAGCCGCCG
rJMFF026F05+          TGAAGCTGGACAAGGATCGCAAGGCTTTGCTCGACCGGAAGGCCAAAGGCAGAGCCGCCG
                      ____________________________________________________________
consensus             TGAAGCTGGACAAGGATCGCAAGGCTTTGCTCGACCGGAAGGCCAAAGGCAGAGCCGCCG
 
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JMFF026F05-           GTAAGGACAAAGGCAAATTCACCGTTGAGGATGTTGCCGCCGCCGCCGGAACTTCATCTA
rJMFF026F05+          GTAAGGACAAAGGCAAATTCACCGTTGAGGATGTTGCCGCCGCCGCCGGAACTTCATCTA
                      ____________________________________________________________
consensus             GTAAGGACAAAGGCAAATTCACCGTTGAGGATGTTGCCGCCGCCGCCGGAACTTCATCTA
 
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JMFF026F05-           TTGATTAGATTTGATAATACTATGTGTTTTCTTTGCTGTTTCGATGATCTGAACTACAAA
rJMFF026F05+          TTGATTAGATTTGATAATACTATGTGTTTTCTTTGCTGTTTCGATGATCTGAACTACAAA
                      ____________________________________________________________
consensus             TTGATTAGATTTGATAATACTATGTGTTTTCTTTGCTGTTTCGATGATCTGAACTACAAA
 
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JMFF026F05-           GTATTCCGTATGTTCCTTGAGTATCTGGGTAATTTTTTTTCTTTCTTTCTTT        
rJMFF026F05+          GTATTCCGTATGTTCCTTGAGTATCTGGTTAATTTTTTTTCTTTCTTTCTTTTTAATTTT
                      ____________________________________________________________
consensus             GTATTCCGTATGTTCCTTGAGTATCTGGTTAATTTTTTTTCTTTCTTTCTTTTTAATTTT
 
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rJMFF026F05+          TACATTTTTTATCGAAGTGAACCTGTTTCTAGTGTCTTTTTTCTCAATGTAGTAGCATCA
                      ____________________________________________________________
consensus             TACATTTTTTATCGAAGTGAACCTGTTTCTAGTGTCTTTTTTCTCAATGTAGTAGCATCA
 
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rJMFF026F05+          AATTTGAAATTTGATGCCATTATCTGTGTTTACAATAATGTGTTTGATGTTATTACCAAC
                      ____________________________________________________________
consensus             AATTTGAAATTTGATGCCATTATCTGTGTTTACAATAATGTGTTTGATGTTATTACCAAC
 
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rJMFF026F05+          TTTAGTTGATTATCTAGATAACATGGAATTCGATAAAACAAAAGAAGCTCTTTTATGGAT
                      ____________________________________________________________
consensus             TTTAGTTGATTATCTAGATAACATGGAATTCGATAAAACAAAAGAAGCTCTTTTATGGAT