Contig 013726:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025M24Sequence589005978 (5)emb|CDP04050.1|8e-67unnamed protein product [Coffea canephora]739013726 (4)emb|CDP04050.1|4e-66unnamed protein product [Coffea canephora]
JMFF028K09Sequence518005978 (5)emb|CDP04050.1|2e-64unnamed protein product [Coffea canephora]100013726 (4)
JMSF006E10Sequence256013726 (4)gb|EYU46015.1|6e-07hypothetical protein MIMGU_mgv1a009125mg [Erythranthe guttata]
JMSF033K05Sequence713005978 (5)emb|CDP04050.1|1e-95unnamed protein product [Coffea canephora]731013726 (4)gb|EYU46015.1|8e-59hypothetical protein MIMGU_mgv1a009125mg [Erythranthe guttata]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K05+                                          TTCGTAACTGGACCCTTTTTAGATGGAC
                      ____________________________________________________________
consensus                                             TTCGTAACTGGACCCTTTTTAGATGGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K05+          TTTGACAAATAAAAATGTATTTGCTTTCAACTACACACCGAAAGTGCTGGCATTCATTGT
rJMFF025M24+                                                          GGCATTCATTGT
                      ____________________________________________________________
consensus             TTTGACAAATAAAAATGTATTTGCTTTCAACTACACACCGAAAGTGCTGGCATTCATTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K05+          TCTATCATGCTTAATATCAG-TTCTGTGAACTTTAGTACTTTTCTGGTAATTGGCAAGAC
rJMFF025M24+          TCTATCATGCTTAATATCAGTTTCTGTGAACTTTAGTACTTTTCTGGTAATTGGCAAGAC
                      ____________________________________________________________
consensus             TCTATCATGCTTAATATCAGTTTCTGTGAACTTTAGTACTTTTCTGGTAATTGGCAAGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K05+          ATCTCCTGTCACCTACCAAGTCTTAGGACATCTGAAAACATGCCTTGTTTTAGCCTTTGG
rJMFF025M24+          ATCTCCTGTCACCTACCAAGTCTTAGGACATCTGAAAACATGCCTTGTTTTAGCCTTTGG
                      ____________________________________________________________
consensus             ATCTCCTGTCACCTACCAAGTCTTAGGACATCTGAAAACATGCCTTGTTTTAGCCTTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K05+          ATATGTTCTCCTTCGTGACCCTTTCAGCTGGCGAAACATTCTAGGGATCTTTATCGCACT
rJMFF025M24+          ATATGTTCTCCTTCGTGACCCTTTCAGCTGGCGAAACATTCTAGGGATCTTTATCGCACT
                      ____________________________________________________________
consensus             ATATGTTCTCCTTCGTGACCCTTTCAGCTGGCGAAACATTCTAGGGATCTTTATCGCACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K05+          GGTTGGAATGATACTATATTCATATTATTGCACAGTTGAGAACCAGCAAAAGACTAGTGA
rJMFF025M24+          GGTTGGAATGATACTATATTCATATTATTGCACAGTTGAGAACCAGCAAAAGACTAGTGA
                      ____________________________________________________________
consensus             GGTTGGAATGATACTATATTCATATTATTGCACAGTTGAGAACCAGCAAAAGACTAGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006E10+                                  TAAGGAAAGTGAATCTGATCCCCTGATAAGTGCCGA
rJMSF033K05+          AGCTTCAGTGCAGGCGTCTCAGGCTAAGGAAAGTGAATCTGATCCCCTGATAAGTGCCGA
rJMFF025M24+          AGCTTCAGTGCAGGCGTCTCAGGCTAAGGAAAGTGAATCTGATCCCCTGATAAGTGCCGA
                      ____________________________________________________________
consensus             AGCTTCAGTGCAGGCGTCTCAGGCTAAGGAAAGTGAATCTGATCCCCTGATAAGTGCCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006E10+          AAAAGGAGGTAGTCATTTAGTGGAGAGTGGTATCGGTAAATCATCCCCGGGGTGGAATTC
rJMFF028K09+                                              TAAATCATCCCCGGGGNGGAATTC
rJMSF033K05+          AAAAGGAGGTAGTCATTTAGTGGAGAGTGGTATCGCTAAATCATCCCCGGGGTGGAATTC
rJMFF025M24+          AAAAGGAGGTAGTCATTTAGTGGAGAGTGGTATCGCTAAATCATCCCCGGGGTGGAATTC
                      ____________________________________________________________
consensus             AAAAGGAGGTAGTCATTTAGTGGAGAGTGGTATCGCTAAATCATCCCCGGGGTGGAATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006E10+          AAACAAAGACTTGCAGGCATAAAGCCAGCCGCTTCAAATTATTATTCATTGGGTTGCCCT
rJMFF028K09+          AAACAAAGACTTGCAGGCATAAAGCCAGCCGCTTCAAATTATTATTCATTGGGTNGCCCT
rJMSF033K05+          AAACAAAGACTTGCAGGCATAAAGCCAGCCGCTTCAAATTATTATTCATTGGGTTGCCCT
rJMFF025M24+          AAACAAAGACTTGCAGGCATAAAGCCAGCCGCTTCAAATTATTATTCATTGGGTTGCCCT
                      ____________________________________________________________
consensus             AAACAAAGACTTGCAGGCATAAAGCCAGCCGCTTCAAATTATTATTCATTGGGTTGCCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006E10+          CCTCACNTCATTCAGAGTTGGAGACTGTTACGACGAGGATGAAGATGTTGCTGCCATGGT
rJMFF028K09+          CCTCACCTCATTCAG                                             
rJMSF033K05+          CCTCACCTCATTCAGAGTTGGAGACTGTTACGACGAGGATGAAGATGTTGCTGCCATGGT
rJMFF025M24+          CCTCACCTCATTCAGAGTTGGAGACTGTTACGACGAGGATGAAGATGTTGCTGCCATGGT
                      ____________________________________________________________
consensus             CCTCACCTCATTCAGAGTTGGAGACTGTTACGACGAGGATGAAGATGTTGCTGCCATGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006E10+          TTCCTTTAGCCATTGTGGTGGGCATTCGGGGAAAAA                        
rJMSF033K05+          TTCCTTTAGCCATTATGGTGGGCATTCGGGGAAAAATTACTTTCTATTTTTGCAGTCTAA
rJMFF025M24+          TTCCTTTAGCCATTATGGTGGGCATTCGGGGAAAAATTACTTTCTATTTTTGCAGTCTAA
                      ____________________________________________________________
consensus             TTCCTTTAGCCATTATGGTGGGCATTCGGGGAAAAATTACTTTCTATTTTTGCAGTCTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K05+          AGAATATGTCTCCACAGAGCAAGTTTTGTTATCTAATCTAAAAGACATGTACGAGTATGC
rJMFF025M24+          AGAATATGTCTCCACAGAGCAAGTTTTGTTATCTAATCTAAAAGACATGTACGAGTATGC
                      ____________________________________________________________
consensus             AGAATATGTCTCCACAGAGCAAGTTTTGTTATCTAATCTAAAAGACATGTACGAGTATGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033K05+          AAAATATATTCCCCAGGGGAGAACATCTGTTGTCCCGG                      
rJMFF025M24+          AAAATATATTCCCCAGGGGAGAACATCTGTTGTCCCGGGAACAGATATATATTGGTATAA
                      ____________________________________________________________
consensus             AAAATATATTCCCCAGGGGAGAACATCTGTTGTCCCGGGAACAGATATATATTGGTATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025M24+          CAAAACACAGATTTTGTCTTGAGTCACTTTGTTCATACGAATTGAATAAGGATGATGGTA
                      ____________________________________________________________
consensus             CAAAACACAGATTTTGTCTTGAGTCACTTTGTTCATACGAATTGAATAAGGATGATGGTA