| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF024H05 | Sequence | 503 | 013719 (12) | ref|XP_008222183.1| | 2e-78 | PREDICTED: nuclear transport factor 2 [Prunus mume] | 705 | 013719 (12) | ref|XP_008222183.1| | 2e-77 | PREDICTED: nuclear transport factor 2 [Prunus mume] |
| JMFF024M02 | Sequence | 494 | 013719 (12) | ref|XP_008222183.1| | 1e-78 | PREDICTED: nuclear transport factor 2 [Prunus mume] | 708 | 013719 (12) | ref|XP_008222183.1| | 2e-77 | PREDICTED: nuclear transport factor 2 [Prunus mume] |
| JMFN028B12 | Sequence | 617 | 013719 (12) | ref|XP_008222183.1| | 1e-77 | PREDICTED: nuclear transport factor 2 [Prunus mume] | |||||
| JMFN031F17 | Sequence | 624 | 013719 (12) | ref|XP_008222183.1| | 1e-77 | PREDICTED: nuclear transport factor 2 [Prunus mume] | |||||
| JMSF013P03 | Sequence | 455 | 013719 (12) | ref|XP_008222183.1| | 9e-79 | PREDICTED: nuclear transport factor 2 [Prunus mume] | 623 | 013719 (12) | ref|XP_008222183.1| | 7e-78 | PREDICTED: nuclear transport factor 2 [Prunus mume] |
| JMSF023F01 | Sequence | 689 | 013719 (12) | ref|XP_008222183.1| | 2e-77 | PREDICTED: nuclear transport factor 2 [Prunus mume] | 688 | 013719 (12) | ref|XP_008222183.1| | 2e-74 | PREDICTED: nuclear transport factor 2 [Prunus mume] |
| JMSF049B13 | Sequence | 676 | 013719 (12) | ref|XP_008222183.1| | 1e-77 | PREDICTED: nuclear transport factor 2 [Prunus mume] | 624 | 013719 (12) | ref|XP_008222183.1| | 7e-78 | PREDICTED: nuclear transport factor 2 [Prunus mume] |
This contig is upended
. : . : . : . : . : . :
rJMFF024H05- TTACTGTAGTTTTTCAATAGATACAAGCAGCAGTAGATGCATACAAT
JMSF023F01+ AGATACAAGCAGCAGTAGATGCATACAAT
JMSF049B13+ TGCATACAAT
rJMSF023F01- AGATACAAGCAGCAGTAGATGCATACAAT
rJMFF024M02- ATTACTGTAGTTTTTCAATAGATACAAGCAGCAGTAGATGCATACAAT
____________________________________________________________
consensus ATTACTGTAGTTTTTCAATAGATACAAGCAGCAGTAGATGCATACAAT
. : . : . : . : . : . :
rJMFF024H05- GTTTCATGGCACTTCATAAGCAAGACCTTTAAAAGTAGATGGAACTACAGAGGTACACTG
JMSF023F01+ GTTTCATGGCACTTCATAAGCAAGACCTTTAAAAGTAGATGGAACTACAGAGGTACACTG
rJMSF049B13- TAGATGGAACTACAGAGGTACACTG
rJMSF013P03- AGATGGAACTACAGAGGTACACTG
JMFN031F17+ TTAAAAGTAGATGGAACTACAGAGGTACACTG
JMFN028B12+ TTTAAAAGTAGATGGAACTACAGAGGTACCCTG
JMSF049B13+ GTTTCATGGCACTTCATAAGCAAGACCTTTAAAAGTAGATGGAACTACAGAGGTACACTG
rJMSF023F01- GTTTCATGGCACTTCATAAGCGAGACCTTTAAAAGTAGATGGAACTACAGAGGTACACTG
rJMFF024M02- GTTTCATGGCACTTCATAAGCAAGACCTTTAAAAGTAGATGGAACTACAGAGGTACACTG
____________________________________________________________
consensus GTTTCATGGCACTTCATAAGCAAGACCTTTAAAAGTAGATGGAACTACAGAGGTACACTG
. : . : . : . : . : . :
rJMFF024H05- ATAATAGTATGAAGAAGAAGAAGAAGCATTCAAAATCCTGGAAAAACAGAGCAATCCAGT
JMSF023F01+ ATAATAGTATGAAGAAGAAGAAGAAGCATTCAAAATCCTGGAAAAACAGAGCAATCCAGT
rJMSF049B13- ATAATAGTATGAAGAAGAAGAAGAAGCATTCAAAATCCTGGAAAAACAGAGCAATCCAGT
rJMSF013P03- ATAATAGTATGAAGAAGAAGAAGAAGCATTCAAAATCCTGGAAAAACAGAGCAATCCAGT
JMFN031F17+ ATAATAGTATGAAGAAGAAGAAGAAGCATTCAAAATCCTGGAAAAACAGAGCAATCCAGT
JMFN028B12+ ATAATAGTATGAAGAAGAAGAAGAAGCATTCAAAATCCTGGAAAAACAGAGCAATCCAGT
JMSF049B13+ ATAATAGTATGAAGAAGAAGAAGAAGCATTCAAAATCCTGGAAAAACAGAGCAATCCAGT
rJMSF023F01- ATAATAGTATGAAGAAGAAGAAGAAGCATTCAAAATCCTGGAAAAACAGAGCANTCCAGT
rJMFF024M02- ATAATAGTATGAAGAAGAAGAAGAAGCATTCAAAATCCTGGAAAAACAGAGCAATCCAGT
____________________________________________________________
consensus ATAATAGTATGAAGAAGAAGAAGAAGCATTCAAAATCCTGGAAAAACAGAGCAATCCAGT
. : . : . : . : . : . :
rJMFF024H05- GATGATGATCAAGCTTGAGTTCCTAAATCTCACACCTTAAAGTCTAAAACTCGAAACAAA
JMSF023F01+ GATGATGATCAAGCTTGAGTTCCTAAATCTCACACCTTAAAGTCTAAAACTCGAAACAAA
rJMSF049B13- GATGATGATCAAGCTTGAGTTCCTAAATCTCACACCTTAAAGTCTAAAACTCGAAACAAA
rJMSF013P03- GATGATGATCAAGCTTGAGTTCCTAAATCTCACACCTTAAAGTCTAAAACTCGAAACAAA
JMFN031F17+ GATGATGATCAAGCTTGAGTTCCTAAATCTCACACCTTAAAGTCTAAAACTCGAAACAAA
JMFN028B12+ GATGATGATCAAGCTTGAGTTCCTAAATCTCACACCTTAAAGTCTAAAACTCGAAACAAA
JMFF024H05+ CTTAAAGTCTAAAACTCGAAACAAA
JMSF049B13+ GATGATGATCAAGCTTGAGTTCCTAAATCTCACACCTTAAAGTCTAAAACTCGAAACAAA
rJMSF023F01- GATGATGATCAAGCTTGAGTTCCTAAATCTCACACCTTAAAGTCTAAAACTCGAAACAAA
JMFF024M02+ TAAAACTCGAAACAAA
rJMFF024M02- GATGATGATCAAGCTTGAGTTCCTAAATCTCACACCTTAAAGTCTAAAACTCGAAACAAA
____________________________________________________________
consensus GATGATGATCAAGCTTGAGTTCCTAAATCTCACACCTTAAAGTCTAAAACTCGAAACAAA
. : . : . : . : . : . :
rJMFF024H05- CAAACAAATTCAATTGATTGGTGCCCCACTTGATTTATACATCTTTGCAGGACATCTTAA
JMSF023F01+ CAAACAAATTCAATTGATTGGTGCCCCACTTGATTTATACATCTTTGCAGGACATCTTAA
rJMSF049B13- CAAACAAATTCAATTGATTGGTGCCCCACTTGATTTATACATCTTTGCAGGACATCTTAA
rJMSF013P03- CAAACAAATTCAATTGATTGGTGCCCCACTTGATTTATACATCTTTGCAGGACATCTTAA
JMFN031F17+ CAAACAAATTCAATTGATTGGTGCCCCACTTGATTTATACATCTTTGCAGGACATCTTAA
JMFN028B12+ CAAACAAATTCAATTGATTGGTGCCCCACTTGATTTATACATCTTTGCAGGACATCTTAA
JMFF024H05+ CAAACAAATTCAATTGATTGGTGCCCCACTTGATTTATACATCTTTGCAGGACATCTTAA
JMSF049B13+ CAAACAAATTCAATTGATTGGTGCCCCACTTGATTTATACATCTTTGCAGGACATCTTAA
rJMSF023F01- CAAACAAATTCAATTGATTGGTGCCCCACTTGATTTATACATCTTTGCAGGACATCTTAA
JMFF024M02+ CAAACAAATTCAATTGATTGGTGCCCCACTTGATTTATACATCTTTGCAGGACATCTTAA
JMSF013P03+ CCCACTTGATTTATACATCTTTGCAGGACATCTTAA
rJMFF024M02- CAAACAAATTCAATTGATTGGTGCCCCACTTGATTTATACATCTTTGCAGGACATCTTAA
____________________________________________________________
consensus CAAACAAATTCAATTGATTGGTGCCCCACTTGATTTATACATCTTTGCAGGACATCTTAA
. : . : . : . : . : . :
rJMFF024H05- GATCCCCCCTATGCATAATTCAACCGGAAAATGTCATTGTAAACATAAAAGCTTCCTTGA
JMSF023F01+ GATCCCCCCTATGCATAATTCAACCGGAAAATGTCATTGTAAACATAAAAGCTTCCTTGA
rJMSF049B13- GATCCCCCCTATGCATAATTCAACCGGAAAATGTCATTGTAAACATAAAAGCTTCCTTGA
rJMSF013P03- GATCCCCCCTATGCATAATTCAACCGGAAAATGTCATTGTAAACATAAAAGCTTCCTTGA
JMFN031F17+ GATCCCCCCTATGCATAATTCAACCGGAAAATGTCATTGTAAACATAAAAGCTTCCTTGA
JMFN028B12+ GATCCCCCCTATGCATAATTCAACCGGAAAATGTCATTGTAAACATAAAAGCTTCCTTGA
JMFF024H05+ GATCCCCCCTATGCATAATTCAACCGGAAAATGTCATTGTAAACATAAAAGCTTCCTTGA
JMSF049B13+ GATCCCCCCTATGCATAATTCAACCGGAAAATGTCATTGTAAACATAAAAGCTTCCTTGA
rJMSF023F01- GATCCCCCCTATGCATAATTCAACCGGAAAATGTCATTGTAAACATAAAAGCTTCCTTGA
JMFF024M02+ GATCCCCCCTATGCATAATTCAACCGGAAAATGTCATTGTAAACATAAAAGCTTCCTTGA
JMSF013P03+ GATCCCCCCTATGCATAATTCAACCGGAAAATGTCATTGTAAACATAAAAGCTTCCTTGA
rJMFF024M02- GATCCCCCCTATGCATAATTCAACCGGAAAATGTCATTGTAAACATAAAAGCTTCCTTGA
____________________________________________________________
consensus GATCCCCCCTATGCATAATTCAACCGGAAAATGTCATTGTAAACATAAAAGCTTCCTTGA
. : . : . : . : . : . :
rJMFF024H05- GGGGTTGGCATCAAATGGAACATCTGGCTGAACTTGAGGGCGTGCTGTTCGCCGGCGAGT
JMSF023F01+ GGGGTTGGCATCAAATGGAACATCTGGCTGAACTTGAGGGCGTGCTGTTCGCCGGCGAGT
rJMSF049B13- GGGGTTGGCATCAAATGGAACATCTGGCTGAACTTGAGGGCGTGCTGTTCGCCGGCGAGT
rJMSF013P03- GGGGTTGGCATCAAATGGAACATCTGGCTGAACTTGAGGGCGTGCTGTTCGCCGGCGAGT
JMFN031F17+ GGGGTTGGCATCAAATGGAACATCTGGCTGAACTTGAGGGCGTGCTGTTCGCCGGCGAGT
JMFN028B12+ GGGGTTGGCATCAAATGGAACATCTGGCTGAACTTGAGGGCGTGCTGTTCGCCGGCGAGT
JMFF024H05+ GGGGTTGGCATCAAATGGAACATCTGGCTGAACTTGAGGGCGTGCTGTTCGCCGGCGAGT
JMSF049B13+ GGGGTTGGCATCAAATGGAACATCTGGCTGAACTTGAGGGCGTGCTGTTCGCCGGCGAGT
rJMSF023F01- GGGGTTGGCATCAAATGGAACATCTGGCTGAACTTGAGGGCGTGCTGTTCGCCGGCGAGT
JMFF024M02+ GGGGTTGGCATCAAATGGAACATCTGGCTGAACTTGAGGGCGTGCTGTTCGCCGGCGAGT
JMSF013P03+ GGGGTTGGCATCAAATGGAACATCTGGCTGAACTTGAGGGCGTGCTGTTCGCCGGCGAGT
rJMFF024M02- GGGGTTGGCATCAAATGGAACATCTGGCTGAACTTGAGGGCGTGCTGTTCGCCGGCGAGT
____________________________________________________________
consensus GGGGTTGGCATCAAATGGAACATCTGGCTGAACTTGAGGGCGTGCTGTTCGCCGGCGAGT
. : . : . : . : . : . :
rJMFF024H05- TGGAGGGTGCCGGAGACGAAGACGAGCATGCCGCCGGCGGGACCAGAGGGCTGGCAGTCG
JMSF023F01+ TGGAGGGTGCCGGAGACGAAGACGAGCATGCCGCCGGCGGGACCAGAGGGCTGGCAGTCG
rJMSF049B13- TGGAGGGTGCCGGAGACGAAGACGAGCATGCCGCCGGCGGGACCAGAGGGCTGGCAGTCG
rJMSF013P03- TGGAGGGTGCCGGAGACGAAGACGAGCATGCCGCCGGCGGGACCAGAGGGCTGGCAGTCG
JMFN031F17+ TGGAGGGTGCCGGAGACGAAGACGAGCATGCCGCCGGCGGGACCAGAGGGCTGGCAGTCG
JMFN028B12+ TGGAGGGTGCCGGAGACGAAGACGAGCATGCCGCCGGCGGGACCAGAGGGCTGGCAGTCG
JMFF024H05+ TGGAGGGTGCCGGAGACGAAGACGAGCATGCCGCCGGCGGGACCAGAGGGCTGGCAGTCG
JMSF049B13+ TGGAGGGTGCCGGAGACGAAGACGAGCATGCCGCCGGCGGGACCAGAGGGCTGGCAGTCG
rJMSF023F01- TGGAGGGTGCCGGANACNAANACNAGCATGCCGCCGGCGGGACCAGAGGGCTGGCAGTCG
JMFF024M02+ TGGAGGGTGCCGGAGACGAAGACGAGCATGCCGCCGGCGGGACCAGAGGGCTGGCAGTCG
JMSF013P03+ TGGAGGGTGCCGGAGACGAAGACGAGCATGCCGCCGGCGGGACCAGAGGGCTGGCAGTCG
rJMFF024M02- TGGAGGGTGCCGGAGACGAAGACGAGCATGCCGCCGGCGGGACCAGAGGGCTGGCAGTCG
____________________________________________________________
consensus TGGAGGGTGCCGGAGACGAAGACGAGCATGCCGCCGGCGGGACCAGAGGGCTGGCAGTCG
. : . : . : . : . : . :
rJMFF024H05- ACGGTAGTGATCGCGTGCTGGCATTGCTGGAAAGGGAGAGAAGTGAGCTTGGCGACGATG
JMSF023F01+ ACGGTAGTGATCGCGTGCTGGCATTGCTGGAAAGGGAGAGAAGTGAGCTTGGCGACGATG
rJMSF049B13- ACGGTAGTGATCGCGTGCTGGCATTGCTGGAAAGGGAGAGAAGTGAGCTTGGCGACGATG
rJMSF013P03- ACGGTAGTGATCGCGTGCTGGCATTGCTGGAAAGGGAGAGAAGTGAGCTTGGCGACGATG
JMFN031F17+ ACGGTAGTGATCGCGTGCTGGCATTGCTGGAAAGGGAGAGAAGTGAGCTTGGCGACGATG
JMFN028B12+ ACGGTAGTGATCGCGTGCTGGCATTGCTGGAAAGGGAGAGAAGTGAGCTTGGCGACGATG
JMFF024H05+ ACGGTAGTGATCGCGTGCTGGCATTGCTGGAAAGGGAGAGAAGTGAGCTTGGCGACGATG
JMSF049B13+ ACGGTAGTGATCGCGTGCTGGCATTGCTGGAAAGGGAGAGAAGTGAGCTTGGCGACGATG
rJMSF023F01- ACGGTAGTGATCGCGTGCTGGCATTGCTGGAAAGGGAGAGAAGTGAGCTTGGCGACNATG
JMFF024M02+ ACGGTAGTGATCGCGTGCTGGCATTGCTGGAAAGGGAGAGAAGTGAGCTTGGCGACGATG
JMSF013P03+ ACGGTAGTGATCGCGTGCTGGCATTGCTGGAAAGGGAGAGAAGTGAGCTTGGCGACGATG
rJMFF024M02- ACGGTAGTGATCGCGTGCTGGCATTGCTGGAAAGGGAGAGAAGTGAGCTTGGCGACGATG
____________________________________________________________
consensus ACGGTAGTGATCGCGTGCTGGCATTGCTGGAAAGGGAGAGAAGTGAGCTTGGCGACGATG
. : . : . : . : . : . :
rJMFF024H05- TTCTGAGAGCCCTGGATCTTCTGGCCTTCGAACGTAAGCATGGAGGCGTCCTGGTACAGG
JMSF023F01+ TTCTGAGAGCCCTGGATCTTCTGGCCTTCGAACGTAAGCATGGAGGCGTCCTGGTACAGG
rJMSF049B13- TTCTGAGAGCCCTGGATCTTCTGGCCTTCGAACGTAAGCATGGAGGCGTCCTGGTACAGG
rJMSF013P03- TTCTGAGAGCCCTGGATCTTCTGGCCTTCGAACGTAAGCATGGAGGCGTCCTGGTACAGG
JMFN031F17+ TTCTGAGAGCCCTGGATCTTCTGGCCTTCGAACGTAAGCATGGAGGCGTCCTGGTACAGG
JMFN028B12+ TTCTGAGAGCCCTGGATCTTCTGGCCTTCGAACGTAAGCATGGAGGCGTCCTGGTACAGG
JMFF024H05+ TTCTGAGAGCCCTGGATCTTCTGGCCTTCGAACGTAAGCATGGAGGCGTCCTGGTACAGG
JMSF049B13+ TTCTGAGAGCCCTGGATCTTCTGGCCTTCGAACGTAAGCATGGAGGCGTCCTGGTACAGG
rJMSF023F01- TTCTGAGAGCCCTGGATCTTCTGGCCTTCGAACGTAAGCATGGAGGCGTCCTGGTACAGG
JMFF024M02+ TTCTGAGAGCCCTGGATCTTCTGGCCTTCGAACGTAAGCATGGAGGCGTCCTGGTACAGG
JMSF013P03+ TTCTGAGAGCCCTGGATCTTCTGGCCTTCGAACGTAAGCATGGAGGCGTCCTGGTACAGG
rJMFF024M02- TTCTGAGAGCCCTGGATCTTCTGGCCTTCGAACGTAAGCATGGAGGCGTCCTGGTACAGG
____________________________________________________________
consensus TTCTGAGAGCCCTGGATCTTCTGGCCTTCGAACGTAAGCATGGAGGCGTCCTGGTACAGG
. : . : . : . : . : . :
rJMFF024H05- CTGCCGAGGGCCCCACGGTTGGAATCGAACATGGAGTAGTAGTGTTCAACGAACGCTTTA
JMSF023F01+ CTGCCGAGGGCCCCACGGTTGGAATCGAACATGGAGTAGTAGTGTTCAACGAACGCTTTA
rJMSF049B13- CTGCCGAGGGCCCCACGGTTGGAATCGAACATGGAGTAGTAGTGTTCAACGAACGCTTTA
rJMSF013P03- CTGCCGAGGGCCCCACGGTTGGAATCGAACATGGAGTAGTAGTGTTCAACGAACGCTTTA
JMFN031F17+ CTGCCGAGGGCCCCACGGTTGGAATCGAACATGGAGTAGTAGTGTTCAACGAACGCTTTA
JMFN028B12+ CTGCCGAGGGCCCCACGGTTGGAATCGAACATGGAGTAGTAGTGTTCAACGAACGCTTTA
JMFF024H05+ CTGCCGAGGGCCCCACGGTTGGAATCGAACATGGAGTAGTAGTGTTCAACGAACGCTTTA
JMSF049B13+ CTGCCGAGGGCCCCACGGTTGGAATCGAACATGGAGTAGTAGTGTTCAACGAACGCTTTA
rJMSF023F01- CTGCCGAGGGCCCCACGGTTGGAATCGAACATGGAGTANTAGTGTTCAACGAACGCTTTA
JMFF024M02+ CTGCCGAGGGCCCCACGGTTGGAATCGAACATGGAGTAGTAGTGTTCAACGAACGCTTTA
JMSF013P03+ CTGCCGAGGGCCCCACGGTTGGAATCGAACATGGAGTAGTAGTGTTCAACGAACGCTTTA
rJMFF024M02- CTGCCGAGGGCCCCACGGTTGGAATCGAACATGGAGTAGTAGTGTTCAACGAACGCTTTA
____________________________________________________________
consensus CTGCCGAGGGCCCCACGGTTGGAATCGAACATGGAGTAGTAGTGTTCAACGAACGCTTTA
. : . : . : . : . : . :
rJMFF024H05- GCTAGAGCGTCTGGATCCATTTTCGCTCCACCGCCGCCGTCTGTGTTTTCCGACTCAC
JMSF023F01+ GCTAGAGCGTCTGGATCCATTTTCGCTCCACCGCCGCCGTCTGTGTTTTCCGACTCACC
rJMSF049B13- GCTAGAGCGTCTGGATCCATTTTCGCTCCACCGCCGCCGTCTGTGTTTTCCGACTCACC
rJMSF013P03- GCTAGAGCGTCTGGATCCATTTTCGCTCCACCGCCGCCGTCTGTGTTTTCCGACTCACC
JMFN031F17+ GCTAGAGCGTCTGGATCCATTTTCGCTCCACCGCCGCCGTCTGT
JMFN028B12+ GCTAGAGCGTCTGGATCCATTTTCGCTCCACCGCCGCCGTCTGT
JMFF024H05+ GCTAGAGCGTCTGGATCCATTTTCGCTCCACCGCCGCCGTCTGTGTTTTCCGACTCAC
JMSF049B13+ GCTAGAGCGTCTGGATCCATTTTCGCTCCACCGCCGCCGTCTGTGTTTTCCGACTCACC
rJMSF023F01- GCTAGAGCGTCTGGATCCATTTTCGCTCCACCGCCGCCGTCTGTGTTTTCCGACTCACC
JMFF024M02+ GCTAGAGCGTCTGGATCCATTTTCGCTCCACCGCCGCCGTCTGTGTTTTCCGACTCAC
JMSF013P03+ GCTAGAGCGTCTGGATCCATTTTCGCTCCACCGCCGCCGTCTGTGTTTTCCGACTCACC
rJMFF024M02- GCTAGAGCGTCTGGATCCATTTTCGCTCCACCGCCGCCGTCTGTGTTTTCCGACTCACCG
____________________________________________________________
consensus GCTAGAGCGTCTGGATCCATTTTCGCTCCACCGCCGCCGTCTGTGTTTTCCGACTCACCG