Contig 013713:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF023F02-                      AAAAATTCTCTCTCTCTCTCTCTTTCTCTCTCTTTCTCTCTCTCTCTTG
                      ____________________________________________________________
consensus                        AAAAATTCTCTCTCTCTCTCTCTTTCTCTCTCTTTCTCTCTCTCTCTTG
 
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JMFF023F02-           TCAGAGAAGCCTGGTAAAAGTTTTTGATACTTTCCTGAGCTTGAGAGAGAGGAAGAAGAG
JMSF035C08-                                                     GAGAGAGAGGAAGAAGAG
                      ____________________________________________________________
consensus             TCAGAGAAGCCTGGTAAAAGTTTTTGATACTTTCCTGAGCTTGAGAGAGAGGAAGAAGAG
 
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JMFF023F02-           ATGAAGAACAATGAAGATCAAGCAAGGTCCTTGTTCGGGATTTCGTTATCTGATCGACCC
JMSF035C08-           ATGAAGAACAATGAAGATCAAGCAAGGTCCTTGTTCGGGATTTCGTTATCTGATCGACCC
                      ____________________________________________________________
consensus             ATGAAGAACAATGAAGATCAAGCAAGGTCCTTGTTCGGGATTTCGTTATCTGATCGACCC
 
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JMFF023F02-           ATATGGCAACAGTTCCTCATCTGCTCCTCTGGTTTCTTCTTCGGTTACCTCGTCAATGGC
JMSF035C08-           ATATGGCAACAGTTCCTCATCTGCTCCTCTGGTTTCTTCTTCGGTTACCTCGTCAATGGC
                      ____________________________________________________________
consensus             ATATGGCAACAGTTCCTCATCTGCTCCTCTGGTTTCTTCTTCGGTTACCTCGTCAATGGC
 
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JMFF023F02-           ATTTGCGAGGAGTATGTGTATAATAGGCTCCAGTTCAGCTATGGGTGGTATTTTACGTTT
JMSF035C08-           ATTTGCGAGGAGTATGTGTATAATAGGCTCCAGTTCAGCTATGGGTGGTATTTTACGTTT
                      ____________________________________________________________
consensus             ATTTGCGAGGAGTATGTGTATAATAGGCTCCAGTTCAGCTATGGGTGGTATTTTACGTTT
 
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JMFF023F02-           ATACAAGGTTTTGTGTACTTAGTACTCATACGTTTGCAGGGTTTCACCATGAAGCAAATG
JMSF035C08-           ATACAAGGTTTTGTGTACTTAGTACTCATACGTTTGCAGGGTTTCACCATGAAGCAAATG
                      ____________________________________________________________
consensus             ATACAAGGTTTTGTGTACTTAGTACTCATACGTTTGCAGGGTTTCACCATGAAGCAAATG
 
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JMFF023F02-           GTGAACCCTTGGAAAACCTATGTGAAGCTCTCTGCTGTTCTTATGGGTTCTCATGGATTA
JMSF035C08-           GTGAACCCTTGGAAAACCTATGTGAAGCTCTCTGCTGTTCTTATGGGTTCTCATGGATTA
                      ____________________________________________________________
consensus             GTGAACCCTTGGAAAACCTATGTGAAGCTCTCTGCTGTTCTTATGGGTTCTCATGGATTA
 
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JMFF023F02-           ACAAAGGGTTCCCTAGCATATCTTAACTACCCTGCACAGATCATGTTCAAATCCACTAAG
JMSF035C08-           ACAAAGGGTTCCCTAGCATATCTTAACTACCCTGCACAGATCATGTTCAAATCCACTAAG
                      ____________________________________________________________
consensus             ACAAAGGGTTCCCTAGCATATCTTAACTACCCTGCACAGATCATGTTCAAATCCACTAAG
 
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JMFF023F02-           GTACTGCCTGTAATGATAATGGGTGCCTTTATTCCCGGGTT                   
JMSF035C08-           GTACTGCCTGTAATGATAATGGGTGCCTTTATTCCCGGGTTAAGAAGAAAATACCCTCTT
                      ____________________________________________________________
consensus             GTACTGCCTGTAATGATAATGGGTGCCTTTATTCCCGGGTTAAGAAGAAAATACCCTCTT
 
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JMSF035C08-           CAAGAATACATCTCGGCAGTGCTCCTAGTTGTTGGCTTGATTCTTTTCACTCTAGCGGAT
                      ____________________________________________________________
consensus             CAAGAATACATCTCGGCAGTGCTCCTAGTTGTTGGCTTGATTCTTTTCACTCTAGCGGAT
 
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JMSF035C08-           GCCAACACTTCTCCGAATTTCAGTATCATTGGCGTCATGATGATTAGTGGTGCTCTAGTC
                      ____________________________________________________________
consensus             GCCAACACTTCTCCGAATTTCAGTATCATTGGCGTCATGATGATTAGTGGTGCTCTAGTC
 
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JMSF035C08-           ATGGATTCTTTTCTGGGTAATTTGCAAGAAGCGATTTTTAAACTGAATCCCGAAACTACT
rJMFF023F02+                                                        ATCCCGAAACTACT
                      ____________________________________________________________
consensus             ATGGATTCTTTTCTGGGTAATTTGCAAGAAGCGATTTTTAAACTGAATCCCGAAACTACT
 
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JMSF035C08-           CAGATGGAGATGCTATTCTGCTCGACTATAGTTGGGGCACCTTTCCTCCTCGTGCCCATG
rJMSF035C08+                                            GGGCACCTTTCCTCCTCGTGCCCATG
rJMFF023F02+          CAGATGGAGATGCTATTCTGCTCGACTATAGTTGGGGCACCTTTCNTCCTCGTGCCCATG
                      ____________________________________________________________
consensus             CAGATGGAGATGCTATTCTGCTCGACTATAGTTGGGGCACCTTTCCTCCTCGTGCCCATG
 
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JMSF035C08-           ATATTAACTGG                                                 
rJMSF035C08+          ATATTAACTGGAGAGCTTTT--CGGCTTGGAAGTCCTGTTATCAGCATCCTTATGTATAT
rJMFF023F02+          ATATTAACTGGAGAGCTTTTCACGGCTTGGAAGTCCTGTTATCAGCATCCTTATGTATAT
                      ____________________________________________________________
consensus             ATATTAACTGGAGAGCTTTTCACGGCTTGGAAGTCCTGTTATCAGCATCCTTATGTATAT
 
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rJMSF035C08+          GGCGTCTTGGTTTTTGAAGCAATGGCCACATTTATAGGTCAAATTTCTGTTCTTTCACTT
rJMFF023F02+          GGCGTCTTGGTTTTTGAAGCAATGGCCACATTTATAGGTCAAATTTCTGTTCTTTCACTT
                      ____________________________________________________________
consensus             GGCGTCTTGGTTTTTGAAGCAATGGCCACATTTATAGGTCAAATTTCTGTTCTTTCACTT
 
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rJMSF035C08+          ATAGCTATTTTTGGAGCTGCCACAACTGCAATGGTAACGACAGCAAGAAAGGCGGTTACT
rJMFF023F02+          ATAGCTATTTTTGGAGCTGCCACAACTGCAATGGTAACGACAGCAAGAAAGGCGGTTACT
                      ____________________________________________________________
consensus             ATAGCTATTTTTGGAGCTGCCACAACTGCAATGGTAACGACAGCAAGAAAGGCGGTTACT
 
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rJMSF035C08+          TTGTTGCTGTCCTACTTGATCTTTACAAAACCACTTACTGAGGAACATTGCTCGGGATTG
rJMFF023F02+          TTGTTGCTGTCCTACTTGATCTTTACAAAACCACTTACTGAGGAACATTGCTCGGGATT-
                      ____________________________________________________________
consensus             TTGTTGCTGTCCTACTTGATCTTTACAAAACCACTTACTGAGGAACATTGCTCGGGATTG
 
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rJMSF035C08+          CTGCTCATAACCATGGGCATCGTATTGAAGCTCTTGCCCGAAACTAAACCTTCGGGCCGA
rJMFF023F02+          CTGCTCATAACCATGGGCATCGTATTGAAGCTCTTGCCCGAAACTAAACCTTCGGGCCGA
                      ____________________________________________________________
consensus             CTGCTCATAACCATGGGCATCGTATTGAAGCTCTTGCCCGAAACTAAACCTTCGGGCCGA
 
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rJMSF035C08+          CCACCCATGTCGTCTGGCGCTACAAACAAGCAAGGAAAACATCATCTCAAAGAGCTGAAG
rJMFF023F02+          CCACCCATGTCGTCTGGCGCTACAAACAAGCAAGGAAAACATCATCTCAAAGAGCTGAAG
                      ____________________________________________________________
consensus             CCACCCATGTCGTCTGGCGCTACAAACAAGCAAGGAAAACATCATCTCAAAGAGCTGAAG
 
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rJMSF035C08+          CGGGCATCTTCAGAAAGCGGTGAGGGTGAAATAGAGGAAGAGAAGAGGCCATTAGTCTAA
rJMFF023F02+          CGGGCATCTTCAGAAAGCGGTGAGGGTGAAATAGAGGAAGAGAAGAGGCCATTAGTCTAA
                      ____________________________________________________________
consensus             CGGGCATCTTCAGAAAGCGGTGAGGGTGAAATAGAGGAAGAGAAGAGGCCATTAGTCTAA
 
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rJMSF035C08+          GAAGTAAAGCTCTATGGTTTAGTTTGGGTATAATATGTTTTCATTGACATCTGATTTTTA
rJMFF023F02+          GAAGTAAAGCTCTATGGTTTAGTTTGGGTATAATATGTTTTCATTGACATCTGATTTTTA
                      ____________________________________________________________
consensus             GAAGTAAAGCTCTATGGTTTAGTTTGGGTATAATATGTTTTCATTGACATCTGATTTTTA
 
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rJMSF035C08+          GATTCTATTAAATTTGTAGTTCACATTCTCTTTGTACTTATACAATAACCAATAAGCAAA
rJMFF023F02+          GATTCTATTAAATTTGTAGTTCACATTCTCTTTGTACTTATACAATAACCAATAAGCAAA
                      ____________________________________________________________
consensus             GATTCTATTAAATTTGTAGTTCACATTCTCTTTGTACTTATACAATAACCAATAAGCAAA
 
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rJMSF035C08+          GTGGCTTGTAATCTAGGCAAAAATTTTTCCACAATATGAGTGTATGTCAAAGTTTGATGT
rJMFF023F02+          GTGGCTTGTAATCTAGGCAAAAATTTTTCCACAATATGAGTGTATGTCAAAGTTTGATGT
                      ____________________________________________________________
consensus             GTGGCTTGTAATCTAGGCAAAAATTTTTCCACAATATGAGTGTATGTCAAAGTTTGATGT
 
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rJMSF035C08+          GAGGTGGGCCTGTTGAGCTCTGATGGAAAAGTTGTATAGATTATATCAT           
rJMFF023F02+          GAGGTGGGCCTGTTGAGCTCTGATGGAAAAGTTGTATAGATTATATCATAAATCAAGGTC
                      ____________________________________________________________
consensus             GAGGTGGGCCTGTTGAGCTCTGATGGAAAAGTTGTATAGATTATATCATAAATCAAGGTC