Contig 013706:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021N02Sequence563013706 (2)ref|XP_006578762.1|2e-36PREDICTED: auxin-induced protein 6B-like [Glycine max]599013706 (2)ref|XP_006578762.1|8e-27PREDICTED: auxin-induced protein 6B-like [Glycine max]

Alignment

This contig is upended


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JMFF021N02-                                                                  ATCAG
                      ____________________________________________________________
consensus                                                                    ATCAG
 
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JMFF021N02-           TAGCGGTGAGAAAATCCTTTAAAATCTGTGCTGCTACTCCGATCCTCCACAGCGTCTATT
                      ____________________________________________________________
consensus             TAGCGGTGAGAAAATCCTTTAAAATCTGTGCTGCTACTCCGATCCTCCACAGCGTCTATT
 
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JMFF021N02-           TTGATTGAGTTTGTTGCAGATGAGCATGAAAGTGAAGAAAGGGTGGCTTGCAGTGTATGT
                      ____________________________________________________________
consensus             TTGATTGAGTTTGTTGCAGATGAGCATGAAAGTGAAGAAAGGGTGGCTTGCAGTGTATGT
 
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JMFF021N02-           GGGGGCAGAAGAGGATGAAGGCAATAATAATAATAAGAAGGGGGGAAGTCAGAGATTTGT
rJMFF021N02+           GGGGCAGAAGAGGATGAAGGCAATAATAATAATAAGAAGGGGGGAAGTCAGAGATTTGT
                      ____________________________________________________________
consensus             GGGGGCAGAAGAGGATGAAGGCAATAATAATAATAAGAAGGGGGGAAGTCAGAGATTTGT
 
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JMFF021N02-           TATTCCTATTTCATATCTGTACCATCCTCTTATGCAGAGTGTTCTTGAGAAGGCTCGCGA
rJMFF021N02+          TATTCCTATTTCATATNTGTACCATCCTNTTATGCAGAGTGTTCTTGAGAAGGCTCGNGA
                      ____________________________________________________________
consensus             TATTCCTATTTCATATCTGTACCATCCTCTTATGCAGAGTGTTCTTGAGAAGGCTCGCGA
 
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JMFF021N02-           AGTGTACGGCTACCACGCTGACGGCCCCCTACGCCTGCCCTGTTCCGTCGACGATTTCCT
rJMFF021N02+          AGTGTACGGCTACCACGCTGACGGCCCCNTACGCCTGCCCTGTTCCGTCGACGATTTCCT
                      ____________________________________________________________
consensus             AGTGTACGGCTACCACGCTGACGGCCCCCTACGCCTGCCCTGTTCCGTCGACGATTTCCT
 
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JMFF021N02-           CCATATTCGTTGGCAGATTGAGAAGGAAGCCAATTACTCCTCCAACCACCACCACCACCA
rJMFF021N02+          CCATATTCGTTGGCAGATTGAGAAGGAAGCCAATTACTCCTCCAACCACCACCACCACCA
                      ____________________________________________________________
consensus             CCATATTCGTTGGCAGATTGAGAAGGAAGCCAATTACTCCTCCAACCACCACCACCACCA
 
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JMFF021N02-           TCATCATCATCTCCCCACCACTTTGTCCTTTCACTCTTGCTGATCGATTAATCATACTTC
rJMFF021N02+          TCATCATCATCTCCCCACCACTTTGTCCTTTCACTCTTGCTGATCGATTAATCATACTTC
                      ____________________________________________________________
consensus             TCATCATCATCTCCCCACCACTTTGTCCTTTCACTCTTGCTGATCGATTAATCATACTTC
 
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JMFF021N02-           AATCCAATTTCCCTTTCCTTTTTCATTTTGGACTATACCAAATTAAAGGAATTACTCCTA
rJMFF021N02+          AATCCAATTTCCCTTTCCTTTTTCATTTTGGACTATACCAAATTAAAGGAATTACTCCTA
                      ____________________________________________________________
consensus             AATCCAATTTCCCTTTCCTTTTTCATTTTGGACTATACCAAATTAAAGGAATTACTCCTA
 
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JMFF021N02-           TCCGGCCTGCGGGCAGATACGTAGAGTTGGATGGGTTAGCTCAGAAAGTTTGATCGAGTG
rJMFF021N02+          TCCGGCCTGCGGGCAGATACGTAGAGTTGGATGGGTTAGCTCAGAAAGTTTGATCGAGTG
                      ____________________________________________________________
consensus             TCCGGCCTGCGGGCAGATACGTAGAGTTGGATGGGTTAGCTCAGAAAGTTTGATCGAGTG
 
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JMFF021N02-           AATTGAATTTCTTCCATT                                          
rJMFF021N02+          AATTGAATTTCTTCCATTCCTTGCCGGCCTCAATCTTCTTAATTTCTCTGTGATAGATCA
                      ____________________________________________________________
consensus             AATTGAATTTCTTCCATTCCTTGCCGGCCTCAATCTTCTTAATTTCTCTGTGATAGATCA
 
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rJMFF021N02+          GATCAGAGTATGCTAGCTAGAGCTGTAATCTAGACCTTTGGTTTTAATTTGTTTCTCTTA
                      ____________________________________________________________
consensus             GATCAGAGTATGCTAGCTAGAGCTGTAATCTAGACCTTTGGTTTTAATTTGTTTCTCTTA
 
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rJMFF021N02+          GCTTGCTTCAATTCACGGTTAGATTATGGCTATATATACGATGTAAAACACATAGCTAGC
                      ____________________________________________________________
consensus             GCTTGCTTCAATTCACGGTTAGATTATGGCTATATATACGATGTAAAACACATAGCTAGC