Contig 013704:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021J07Sequence591013704 (6)ref|XP_009790027.1|4e-51PREDICTED: uncharacterized protein LOC104237552 isoform X2 [Nicotiana sylvestri628013704 (6)ref|XP_009790027.1|7e-51PREDICTED: uncharacterized protein LOC104237552 isoform X2 [Nicotiana sylvestri
JMFF032P03Sequence595013704 (6)ref|XP_009629181.1|174PREDICTED: uncharacterized protein LOC104119393 [Nicotiana tomentosiformis]676013704 (6)ref|XP_009629181.1|174PREDICTED: uncharacterized protein LOC104119393 [Nicotiana tomentosiformis]
JMFF049A20Sequence641013704 (6)ref|XP_009790027.1|7e-51PREDICTED: uncharacterized protein LOC104237552 isoform X2 [Nicotiana sylvestri608013704 (6)ref|XP_009790027.1|1e-49PREDICTED: uncharacterized protein LOC104237552 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


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rJMFF032P03-                                       AATGAGAATCAAAGTGATTGAACAATAACCA
                      ____________________________________________________________
consensus                                          AATGAGAATCAAAGTGATTGAACAATAACCA
 
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rJMFF049A20-                  TCAAGCAACAATGACAATCATGCACTATCATGTTGAATGTTGGGAATTACAC
rJMFF032P03-          GTTTCATGTCAAGCAACAATGACAATCATGCACTATCATGTTGAATGTTGGGAATTACAC
JMFF032P03+                                                             GGAATTACAC
JMFF049A20+                   TCAAGCAACAATGACAATCATGCACTATCATGTTGAATGTTGGGAATTACAC
JMFF021J07+                                                                     AC
rJMFF021J07-                                          CTATCATGTTGAATGTTGGGAATTACAC
                      ____________________________________________________________
consensus             GTTTCATGTCAAGCAACAATGACAATCATGCACTATCATGTTGAATGTTGGGAATTACAC
 
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rJMFF049A20-          ATACAGCACACAAGTCACCATCATAATTATTCACAATCCTTTTGCCCAACCACATTAGCA
rJMFF032P03-          ATACAGCACACAAGTCACCATCATAATTATTCACAATCCTTTTGCCCAACCACATTAGCA
JMFF032P03+           ATACAGCACACAAGTCACCATCATAATTATTCACAATCCTTTTGCCCAACCACATTAGCA
JMFF049A20+           ATACAGCACACAAGTCACCATCATAATTATTCACAATCCTTTTGCCCAACCACATTAGCA
JMFF021J07+           ATACAGCACACAAGTCACCATCATAATTATTCACAATCCTTTTGCCCAACCACATTAGCA
rJMFF021J07-          ATACAGCACACAAGTCACCATCATAATTATTCACAATCCTTTTGCCCAACCACATTAGCA
                      ____________________________________________________________
consensus             ATACAGCACACAAGTCACCATCATAATTATTCACAATCCTTTTGCCCAACCACATTAGCA
 
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rJMFF049A20-          ACTCTAGGACAAGCACAAGCAAACAGGTGAGGCCAACATACCATGCAGCAAAGCAACGTG
rJMFF032P03-          ACTCTAGGACAAGCACAAGCAAACAGGTGAGGCCAACATACCATGCAGCAAAGCAACGTG
JMFF032P03+           ACTCTAGGACAAGCACAAGCAAACAGGTGAGGCCAACATACCATGCAGCAAAGCAACGTG
JMFF049A20+           ACTCTAGGACAAGCACAAGCAAACAGGTGAGGCCAACATACCATGCAGCAAAGCAACGTG
JMFF021J07+           ACTCTAGGACAAGCACAAGCAAACAGGTGAGGCCAACATACCATGCAGCAAAGCAACGTG
rJMFF021J07-          ACTCTAGGACAAGCACAAGCAAACAGGTGAGGCCAACATACCATGCAGCAAAGCAACGTG
                      ____________________________________________________________
consensus             ACTCTAGGACAAGCACAAGCAAACAGGTGAGGCCAACATACCATGCAGCAAAGCAACGTG
 
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rJMFF049A20-          CTCAAACCTCTTCAATGACACCCCTTAATGTTGTCCACCATCTTCTCCCATCTTGTTTTC
rJMFF032P03-          CTCAAACCTCTTCAATGACACCCCTTAATGTTGTCCACCATCTTCTCCCATCTTGTTTTC
JMFF032P03+           CTCAAACCTCTTCAATGACACCCCTTAATGTTGTCCACCATCTTCTCCCATCTTGTTTTC
JMFF049A20+           CTCAAACCTCTTCAATGACACCCCTTAATGTTGTCCACCATCTTCTCCCATCTTGTTTTC
JMFF021J07+           CTCAAACCTCTTCAATGACACCCCTTAATGTTGTCCACCATCTTCTCCCATCTTGTTTTC
rJMFF021J07-          CTCAAACCTCTTCAATGACACCCCTTAATGTTGTCCACCATCTTCTCCCATCTTGTTTTC
                      ____________________________________________________________
consensus             CTCAAACCTCTTCAATGACACCCCTTAATGTTGTCCACCATCTTCTCCCATCTTGTTTTC
 
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rJMFF049A20-          TGCTAGCAGCATCCGGTCTATATTATCGACTCGTCTTTGTATAGACTTCAAAACTGAATT
rJMFF032P03-          TGCTAGCAGCATCCGGTCTATATTATCGACTCGTCTTTGTATAGACTTCAAAACTGAATT
JMFF032P03+           TGCTAGCAGCATCCGGTCTATATTATCGACTCGTCTTTGTATAGACTTCAAAACTGAATT
JMFF049A20+           TGCTAGCAGCATCCGGTCTATATTATCGACTCGTCTTTGTATAGACTTCAAAACTGAATT
JMFF021J07+           TGCTAGCAGCATCCGGTCTATATTATCGACTCGTCTTTGTATAGACTTCAAAACTGAATT
rJMFF021J07-          TGCTAGCAGCATCCGGTCTATATTATCGACTCGTCTTTGTATAGACTTCAAAACTGAATT
                      ____________________________________________________________
consensus             TGCTAGCAGCATCCGGTCTATATTATCGACTCGTCTTTGTATAGACTTCAAAACTGAATT
 
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rJMFF049A20-          TAAAGATGTGACTCTCTTTCTAACACCAGAAATCCTAGCGGCATGTTGCACGATGAAAGG
rJMFF032P03-          TAAAGATGTGACTCTCTTTCTAACACCAGAAATCCTAGCGGCATGTTGCATGATGAAAGG
JMFF032P03+           TAAAGATGTGACTCTCTTTCTAACACCAGAAATCCTAGCGGCATGTTGCATGATGAAAGG
JMFF049A20+           TAAAGATGTGACTCTCTTTCTAACACCAGAAATCCTAGCGGCATGTTGCACGATGAAAGG
JMFF021J07+           TAAAGATGTGACTCTCTTTCTAACACCAGAAATCCTAGCGGCATGTTGCACGATGAAAGG
rJMFF021J07-          TAAAGATGTGACTCTCTTTCTAACACCAGAAATCCTAGCGGCATGTTGCACGATGAAAGG
                      ____________________________________________________________
consensus             TAAAGATGTGACTCTCTTTCTAACACCAGAAATCCTAGCGGCATGTTGCACGATGAAAGG
 
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rJMFF049A20-          CAACGGTGCATCCTCCAACAGCTTGTCAAGCTCTCCGGTGAGACGATCGAGGGCGAAGGA
rJMFF032P03-          CAACGGTGCATCCTCCAACAGCTTGTCAAGCTCTCCGGTGAGACGATCGAGGGCGAAGGA
JMFF032P03+           CAACGGTGCATCCTCCAACAGCTTGTCAAGCTCTCCGGTGAGACGATCGAGGGCGAAGGA
JMFF049A20+           CAACGGTGCATCCTCCAACAGCTTGTCAAGCTCTCCGGTGAGACGATCGAGGGCGAAGGA
JMFF021J07+           CAACGGTGCATCCTCCAACAGCTTGTCAAGCTCTCCGGTGAGACGATCGAGGGCGAAGGA
rJMFF021J07-          CAACGGTGCATCCTCCAACAGCTTGTCAAGCTCTCCGGTGAGACGATCGAGGGCGAAGGA
                      ____________________________________________________________
consensus             CAACGGTGCATCCTCCAACAGCTTGTCAAGCTCTCCGGTGAGACGATCGAGGGCGAAGGA
 
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rJMFF049A20-          GAGTTGATCTTGACTGCGGGAAGTGGCGTCAGCTCTGCTATCGAACTCCCTAATTACAGA
rJMFF032P03-          GAGTTGATCTTGACTGCGGGAAGTGGCGTCAGCTCTGCTATCGAACTCCCTAATTACAGA
JMFF032P03+           GAGTTGATCTTGACTGCGGGAAGTGGCGTCAGCTCTGCTATCGAACTCCCTAATTACAGA
JMFF049A20+           GAGTTGATCTTGACTGCGGGAAGTGGCGTCAGCTCTGCTATCGAACTCCCTAATTACAGA
JMFF021J07+           GAGTTGATCTTGACTGCGGGAAGTGGCGTCAGCTCTGCTATCGAACTCCCTAATTACAGA
rJMFF021J07-          GAGTTGATCTTGACTGCGGGAAGTGGCGTCAGCTCTGCTATCGAACTCCCTAATTACAGA
                      ____________________________________________________________
consensus             GAGTTGATCTTGACTGCGGGAAGTGGCGTCAGCTCTGCTATCGAACTCCCTAATTACAGA
 
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rJMFF049A20-          TGAAATCAAGGTGGACAGGCCTATACCCATGGGAGAAGTTGAGGCATTGCTCTCATCGTC
rJMFF032P03-          TGAAATCAAGGTGGACAGGCCTATACCCATGGGAGAAGTTGAGGTATTGCTCTCATCGTC
JMFF032P03+           TGAAATCAAGGTGGACAGGCCTATACCCATGGGAGAAGTTGAGGTATTGCTCTCATCGTC
JMFF049A20+           TGAAATCAAGGTGGACAGGCCTATACCCATGGGAGAAGTTGAGGCATTGCTCTCATCGTC
JMFF021J07+           TGAAATCAAGGTGGACAGGCCTATACCCATGGGAGAAGTTGAGGCATTGCTCTCATCGTC
rJMFF021J07-          TGAAATCAAGGTGGACAGGCCTATACCCATGGGAGAAGTTGAGGCATTGCTCTCATCGTC
                      ____________________________________________________________
consensus             TGAAATCAAGGTGGACAGGCCTATACCCATGGGAGAAGTTGAGGCATTGCTCTCATCGTC
 
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rJMFF049A20-          ATTGCCGTCGCCGGCAACGGAAGGTATCCCGTCCTCAGTGGAGTCCGGTAGACGATTTTC
rJMFF032P03-          ATTGCCGTCGCCGGCAACGGAAGGTATCCCGTCCTCAGTGGAGTCCGGTAGACGATTTTC
JMFF032P03+           ATTGCCGTCGCCGGCAACGGAAGGTATCCCGTCCTCAGTGGAGTCCGGTAGACGATTTTC
JMFF049A20+           ATTGCCGTCGCCGGCAACGGAAGGTATCCCGTCCTCAGTGGAGTCCGGTAGACGATTTTC
JMFF021J07+           ATTGCCGTCGCCGGCAACGGAAGGTATCCCGTCCTCAGTGGAGTCCGGTAGACGATTTTC
rJMFF021J07-          ATTGCCGTCGCCGGCAACGGAAGGTATCCCGTCCTCAGTGGAGTCCGGTAGACGATTTTC
                      ____________________________________________________________
consensus             ATTGCCGTCGCCGGCAACGGAAGGTATCCCGTCCTCAGTGGAGTCCGGTAGACGATTTTC
 
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rJMFF049A20-          AGGAACGTCATC                                                
rJMFF032P03-          AGGAACGTCATCAGACATAGTTACAGAAAGACCTAAGCTCCAAGT               
JMFF032P03+           AGGAACGTCATCAGACATAGTTACAGAAAGACCTAAGCTCCAAGT               
JMFF049A20+           AGGAACGTCATCAGACATAGTTACAGAAAGACCTAAGCTCCAAGT               
JMFF021J07+           AGGAACGTCATCAGACATAGTTACAGAAAGACCTAAGCTCCAAGT               
rJMFF021J07-          AGGAACGTCATCAGACATAGTTACAGAAAGACCTAAGCTCCAAGTAAGTCGGTTCTCGAC
                      ____________________________________________________________
consensus             AGGAACGTCATCAGACATAGTTACAGAAAGACCTAAGCTCCAAGTAAGTCGGTTCTCGAC