Contig 013699:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020H11Sequence466012091 (9)736013699 (8)ref|XP_009601214.1|1e-82PREDICTED: protein EXECUTER 1, chloroplastic [Nicotiana tomentosiformis]
JMSF010K03Sequence360012091 (9)756013699 (8)ref|XP_009601214.1|4e-90PREDICTED: protein EXECUTER 1, chloroplastic [Nicotiana tomentosiformis]
JMSF025P16Sequence693012091 (9)ref|XP_009783985.1|2e-52PREDICTED: protein EXECUTER 1, chloroplastic [Nicotiana sylvestris]781013699 (8)ref|XP_009601214.1|4e-87PREDICTED: protein EXECUTER 1, chloroplastic [Nicotiana tomentosiformis]
JMSF031H15Sequence671012091 (9)ref|XP_009783985.1|1e-47PREDICTED: protein EXECUTER 1, chloroplastic [Nicotiana sylvestris]694013699 (8)ref|XP_009601214.1|2e-73PREDICTED: protein EXECUTER 1, chloroplastic [Nicotiana tomentosiformis]
JMSF033O09Sequence700012091 (9)ref|XP_009783985.1|3e-47PREDICTED: protein EXECUTER 1, chloroplastic [Nicotiana sylvestris]753013699 (8)ref|XP_009601214.1|1e-93PREDICTED: protein EXECUTER 1, chloroplastic [Nicotiana tomentosiformis]
JMSF039D15Sequence711012091 (9)ref|XP_009783985.1|8e-54PREDICTED: protein EXECUTER 1, chloroplastic [Nicotiana sylvestris]771013699 (8)ref|XP_009601214.1|2e-90PREDICTED: protein EXECUTER 1, chloroplastic [Nicotiana tomentosiformis]
JMSF049E19Sequence711012091 (9)ref|XP_009783985.1|3e-47PREDICTED: protein EXECUTER 1, chloroplastic [Nicotiana sylvestris]750013699 (8)ref|XP_009601214.1|5e-90PREDICTED: protein EXECUTER 1, chloroplastic [Nicotiana tomentosiformis]
JMSF051F15Sequence701012091 (9)ref|XP_009783985.1|9e-55PREDICTED: protein EXECUTER 1, chloroplastic [Nicotiana sylvestris]786013699 (8)ref|XP_009601214.1|2e-94PREDICTED: protein EXECUTER 1, chloroplastic [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF033O09+                                                             CCAGGATTA
rJMSF051F15+                                            CTGNATACACAANTTTACCAGGATTA
rJMSF039D15+                                                             CCAGGATTA
rJMSF025P16+                                                             CCAGGATTA
                      ____________________________________________________________
consensus                                               CTGNATACACAANTTTACCAGGATTA
 
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rJMSF010K03+             CTTCTGGCAGTGATTTAGATCCTTTTGAT-GGCCTATATGTAGGTGCATTTGGACCT
rJMSF033O09+          CCACTTCTGGCAGTGATTTAGATCCTTTTGAT-GGCCTATATGTAGGTGCATTTGGACCT
rJMSF051F15+          CCACTTCTGGCAGTGATTTAGATCCTTTTGAT-GGCCTATATGTAGGTGCATTTGGACCT
rJMSF049E19+                    CAGTGATTTAGATCCTTTTGAT-GGCCTATATGTAGGTGCATTTGGACCT
rJMSF039D15+          CCACTTCTGGCAGTGATTTAGATCCTTTNGAT-GGCCTATATGTAGGTGCATTTGGACCT
rJMSF025P16+          CCACTTCTGGCAGTGATTTAGATCCTTTTGATGGGCCTATATGTAGGTGCA-TTGGACCT
rJMFF020H11+                                                      AGGTGCATTTGGACCT
                      ____________________________________________________________
consensus             CCACTTCTGGCAGTGATTTAGATCCTTTTGAT-GGCCTATATGTAGGTGCATTTGGACCT
 
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rJMSF010K03+          TATGGTACTGAGGTTGTGCAATTAAAGCGTAAATATGGGAACTGGAATGTTCGCGATGAA
rJMSF033O09+          TATGGTACTGAGGTTGTGCAATTAAAGCGTAAATATGGGAACTGGAATGTTCGCGATGAA
rJMSF051F15+          TATGGTACTGAGGTTGTGCAATTAAAGCGTAAATATGGGAACTGGAATGTTCGCGATGAA
rJMSF049E19+          TATGGTACTGAGGTTGTGCAATTAAAGCGTAAATATGGGAACTGGAATGTTCGCGATGAA
rJMSF031H15+                 CTGAGGTTGTGCAATTAAAGCGTAAATATGGGAACTGGAATGTTCGCGATGAA
rJMSF039D15+          TATGGTACTGAGGTTGTGCAATTAAAGCGTAAATATGGGAACTGGAATGTTCGCGATGAA
rJMSF025P16+          TATGGTACTGAGGTTGTGCAATTAAAGCGTAAATATGGGAACTGGAATGTTCGCGATGAA
rJMFF020H11+          TATGGTACTGAGGTTGTGCAATTAAAGCGTAAATATGGGAACTGGAATGTTCGCGATGAA
                      ____________________________________________________________
consensus             TATGGTACTGAGGTTGTGCAATTAAAGCGTAAATATGGGAACTGGAATGTTCGCGATGAA
 
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rJMSF010K03+          GAGAAATCCTCTGGTATGGAGTTCTTTGAGTATGTCGAAGCAGTAAAACTGACAGGCGAT
rJMSF033O09+          GAGAAATCCTCTGGTATGGAGTTCTTTGAGTATGTCGAAGCAGTAAAACTGACAGGCGAT
rJMSF051F15+          GAGAAATCCTCTGGTATGGAGTTCTTTGAGTATGTCGAAGCAGTAAAACTGACAGGCGAT
rJMSF049E19+          GAGAAATCCTCTGGTATGGAGTTCTTTGAGTATGTCGAAGCAGTAAAACTGACAGGCGAT
rJMSF031H15+          GAGAAATCCTCTGGTATGGAGTTCTTTGAGTATGTCGAAGCAGTAAAACTGACAGGCGAT
rJMSF039D15+          GAGAAATCCTCTGGTATGGAGTTCTTTGAGTATGTCGAAGCAGTAAAACTGACAGGCGAT
rJMSF025P16+          GAGAAATCCTCTGGTATGGAGTTCTTTGAGTATGTCGAAGCAGTAAAACTGACAGGCGAT
rJMFF020H11+          GAGAAATCCTCTGGTATGGAGTTCTTTGAGTATGTCGAAGCAGTAAAACTGACAGGCGAT
                      ____________________________________________________________
consensus             GAGAAATCCTCTGGTATGGAGTTCTTTGAGTATGTCGAAGCAGTAAAACTGACAGGCGAT
 
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rJMSF010K03+          ATGAACGTTCCAGCTGGCCAGGTGACATTCCGTGCTAAAATCGGAAAAGGAAATCGATTT
rJMSF033O09+          ATGAACGTTCCAGCTGGCCAGGTGACATTCCGTGCTAAAATCGGAAAAGGAAATCGATTT
rJMSF051F15+          ATGAACGTTCCAGCTGGCCAGGTGACATTCCGTGCTAAAATCGGAAAAGGAAATCGATTT
rJMSF049E19+          ATGAACGTTCCAGCTGGCCAGGTGACATTCCGTGCTAAAATCGGAAAAGGAAATCGATTT
rJMSF031H15+          ATGAACGTTCCAGCTGGCCAGGTGACATTCCGTGCTAAAATCGGAAAAGGAAATCGATTT
rJMSF039D15+          ATGAACGTTCCAGCTGGCCAGGTGACATTCCGTGCTAAAATCGGAAAAGGAAATCGATTT
rJMSF025P16+          ATGAACGTTCCAGCTGGCCAGGTGACATTCCGTGCTAAAATCGGAAAAGGAAATCGATTT
rJMFF020H11+          ATGAACGTTCCAGCTGGCCAGGTGACATTCCGTGCTAAAATCGGAAAAGGAAATCGATTT
                      ____________________________________________________________
consensus             ATGAACGTTCCAGCTGGCCAGGTGACATTCCGTGCTAAAATCGGAAAAGGAAATCGATTT
 
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rJMSF010K03+          ACTAACAAAGGGATGTATCCAGATGAGCTGGGAGTGGTTGCAAGCTACAAAGGTCAAGGG
rJMSF033O09+          ACTAACAAAGGGATGTATCCAGATGAGCTGGGAGTGGTTGCAAGCTACAAAGGTCAAGGG
rJMSF051F15+          ACTAACAAAGGGATGTATCCAGATGAGCTGGGAGTGGTTGCAAGCTACAAAGGTCAAGGG
rJMSF049E19+          ACTAACAAAGGGATGTATCCAGATGAGCTGGGAGTGGTTGCAAGCTACAAAGGTCAAGGG
rJMSF031H15+          ACTAACAAAGGGANGTATCCAGATGAGCTGGGAGTGGTTGCAAGCTACAAAGGTCAAGGG
rJMSF039D15+          ACTAACAAAGGGANGTATCCAGATGAGCTGGGAGTGGTTGCAAGCTACAAAGGTCAAGGG
rJMSF025P16+          ACTAACAAAGGGATGTATCCAGATGAGCTGGGAGTGGTTGCAAGCTACAAAGGTCAAGGG
rJMFF020H11+          ACTAACAAAGGGATGTATCCAGATGAGCTGGGAGTGGTTGCAAGCTACAAAGGTCAAGGG
                      ____________________________________________________________
consensus             ACTAACAAAGGGATGTATCCAGATGAGCTGGGAGTGGTTGCAAGCTACAAAGGTCAAGGG
 
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rJMSF010K03+          AGAATAGCAGAATATGGGTTCAAAAATCCCAAGTGGGTTGAGGGCGAGTTGCTGCAACTC
rJMSF033O09+          AGAATAGCAGAATATGGGTTCAAAAATCCCAAGTGGGTTGAGGGCGAGTTGCTGCAACTC
rJMSF051F15+          AGAATAGCAGAATATGGGTTCAAAAATCCCAAGTGGGTTGAGGGCGAGTTGCTGCAACTC
rJMSF049E19+          AGAATAGCAGAATATGGGTTCAAAAATCCCAAGTGGGTTGAGGGCGAGTTGCTGCAACTC
rJMSF031H15+          AGAATAGCAGAATATGGGTTCAAAAATCCCAAGTGGGNTGAGGGCGAGTTGCTGCAACTC
rJMSF039D15+          AGAATAGCAGAATATGGGTTCAAAAATCCCAAGTGGGTTGAGGGCGAGTTGCTGCAACTC
rJMSF025P16+          AGAATAGCAGAATATGGGTTCAAAAATCCCAAGTGGGTTGAGGGCGAGTTGCTGCAACTC
rJMFF020H11+          AGAATAGCAGAATATGGGTTCAAAAATCCCAAGTGGGTTGAGGGCGAGTTGCTGCAACTC
                      ____________________________________________________________
consensus             AGAATAGCAGAATATGGGTTCAAAAATCCCAAGTGGGTTGAGGGCGAGTTGCTGCAACTC
 
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rJMSF010K03+          AATGGCAAGGGTGTCGGGCCACATATCAAAGGTGCAGACCTTGGGTTTCTCTATGTCATT
rJMSF033O09+          AATGGCAAGGGTGTCGGGCCACATATCAAAGGTGCAGACCTTGGGTTTCTCTATGTCATT
rJMSF051F15+          AATGGCAAGGGTGTCGGGCCACATATCAAAGGTGCAGACCTTGGGTTTCTCTATGTCATT
rJMSF049E19+          AATGGCAAGGGTGTCGGGCCACATATCAAAGGTGCAGACCTTGGGTTTCTCTATGTCATT
rJMSF031H15+          AATGGCAAGGGTGTCGGGCCACATATCAAAGGTGCAGACCTTGGGTTTCTCTATGTCATT
rJMSF039D15+          AATGGCAAGGGTGTCGGGCCACATATCAAAGGTGCAGACCTTGGGTTTCTCTATGTCATT
rJMSF025P16+          AATGGCAAGGGTGTCGGGCCACATATCAAAGGTGCAGACCTTGGGTTTCTCTATGTCATT
rJMFF020H11+          AATGGCAAGGGTGTCGGGCCACATATCAAAGGTGCAGACCTTGGGTTTCTCTATGTCATT
                      ____________________________________________________________
consensus             AATGGCAAGGGTGTCGGGCCACATATCAAAGGTGCAGACCTTGGGTTTCTCTATGTCATT
 
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rJMSF010K03+          CCGGAGCACAGCTTTCTTGTGCTCTTCAGTCGTTTGAAGTTACCGGAGTAGGGTCGTGAG
rJMSF033O09+          CCGGAGCACAGCTTTCTTGTGCTCTTCAGTCGTTTGAAGTTACCGGAGTAGGGTCGTGAG
rJMSF051F15+          CCGGAGCACAGCTTTCTTGTGCTCTTCAGTCGTTTGAAGTTACCGGAGTAGGGTCGTGAG
rJMSF049E19+          CCGGAGCACAGCTTTCTTGTGCTCTTCAGTCGTTTGAAGTTACCGGAGTAGGGTCGTGAG
rJMSF031H15+          CCGGAGCACAGCTTTCTTGTGCTCTTCAGTCGTTNGAAGTTACCGGAGTAGGGTCGTGAG
rJMSF039D15+          CCGGAGCACAGCTTTCTTGTGCTCTTCAGTCGTTNGAAGTTACCGGAGTAGGGTCGTGAG
rJMSF025P16+          CCGGAGCACAGCTTTCTTGTGCTCTTCAGTCGTTTGAAGTTACCGGAGTAGGGTCGTGAG
rJMFF020H11+          CCGGAGCACAGCTTTCTTGTGCTCTTCAGTCGTTTGAAGTTACCGGAGTAGGGTCGTGAG
                      ____________________________________________________________
consensus             CCGGAGCACAGCTTTCTTGTGCTCTTCAGTCGTTTGAAGTTACCGGAGTAGGGTCGTGAG
 
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rJMSF010K03+          ATGGAGATATAATGTTAAGCAAAACTAACCCTAAATACTACTGTCTCTGGAGTTGTATTA
rJMSF033O09+          ATGGAGATATAATGTTAAGCAAAACTAACCCTAAATACTACTGTCTCTGGAGTTGTATTA
rJMSF051F15+          ATGGAGATATAATGTTAAGCAAAACTAACCCTAAATACTACTGTCTCTGGAGTTGTATTA
rJMSF049E19+          ATGGAGATATAATGTTAAGCAAAACTAACCCTAAATACTACTGTCTCTGGAGTTGTATTA
rJMSF031H15+          ATGGAGATATAATGTTAAGCAAAACTAACCCTAAATNCTNCTGTCTCTGGAGTTGTATTA
rJMSF039D15+          ATGGAGATATAATGTTAAGCAAAACTAACCCTAAATACTACTGTCTCTGGAGTTGTATTA
rJMSF025P16+          ATGGAGATATAATGTTAAGCAAAACTAACCCTAAATACTACTGTCTCTGGAGTTGTATTA
rJMFF020H11+          ATGGAGATATAATGTTAAGCAAAACTAACCCTAAATACTACTGTCTCTGGAGTTGTATTA
                      ____________________________________________________________
consensus             ATGGAGATATAATGTTAAGCAAAACTAACCCTAAATACTACTGTCTCTGGAGTTGTATTA
 
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rJMSF010K03+          TGGGTGGCATGCATGCAGTTTTGATTCCACTTCTTGCGGCAAGACTTGGAGAAGATCGGA
rJMSF033O09+          TGGGTGGCATGCATGCAGTTTTGATTCCACTTCTTGCGGCAAGACTTGGAGAAGATCGGA
rJMSF051F15+          TGGGTGGCATGCATGCAGTTTTGATTCCACTTCTTGCGGCAAGACTTGGAGAAGATCGGA
rJMSF049E19+          TGGGTGGCATGCATGCAGTTTTGATTCCACTTCTTGCGGCAAGACTTGGAGAAGATCGGA
rJMSF031H15+          TGGGTGGCATGCATGCAGTTTTGATTCCACTTCTTGCGGCAAGACTTGGAGAAGATCGGA
rJMSF039D15+          TGGGTGGCATGCATGCAGTTTTGATTCCACTTCTTGCGGCAAGACTTGGAGAAGATCGGA
rJMSF025P16+          TGGGTGGCATGCATGCAGTTTTGATTCCACTTCTTGCGGCAAGACTTGGAGAAGATCGGA
rJMFF020H11+          TGGGTGGCATGCATGCAGTTTTGATTCCACTTCTTGCGGCAAGACTTGGAGAAGATCGGA
                      ____________________________________________________________
consensus             TGGGTGGCATGCATGCAGTTTTGATTCCACTTCTTGCGGCAAGACTTGGAGAAGATCGGA
 
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rJMSF010K03+          AGAGTCTTTTACTCTATATATCTATCTTTGTTTGTTTTTGGTTGAAGTTTAAAGGTGTAT
rJMSF033O09+          AGAGTCTTTTACTCTATATATCTATCTTTGTTTGTTTTTGGTTGAAGTTTAAAGGTGTAT
rJMSF051F15+          AGAGTCTTTTACTCTATATATCTATCTTTGTTTGTTTTTGGTTGAAGTTTAAAGGTGTAT
rJMSF049E19+          AGAGTCTTTTACTCTATATATCTATCTTTGTTTGTTTTTGGTTGAAGTTTAAAGGTGTAT
rJMSF031H15+          AGAGTCTTTTACTCTATATATCTATCTTTGTTTGTTTTTGGTTGAAGTTTAAAGGTGTAT
rJMSF039D15+          AGAGTCTTTTACTCTATATATCTATCTTTGTTTGTTTTTGGTTGAAGTTTAAAGGTGTAT
rJMSF025P16+          AGAGTCTTTTACTCTATATATCTATCTTTGTTTGTTTTTGGTTGAAGTTTAAAGGTGTAT
rJMFF020H11+          NGAGTCTTTTACTCTATATATCTATCTTTGTTTGTTTTTGGTTGAAGTTTAAAGGTGTAT
                      ____________________________________________________________
consensus             AGAGTCTTTTACTCTATATATCTATCTTTGTTTGTTTTTGGTTGAAGTTTAAAGGTGTAT
 
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rJMSF010K03+          TTTATCACGACAACCTCAATCTACCATGTAGGTAACCTTGTAACATTTGCAGCTCTTGGA
rJMSF033O09+          TTTATCACGACAACCTCAATCTACCATGTAGGTAACCTTGTAACATTTGCAGCTCTTGGA
rJMSF051F15+          TTTATCACGACAACCTCAATCTACCATGTAGGTAACCTTGTAACATTTGCAGCTCTTGGA
rJMSF049E19+          TTTATCACGACAACCTCAATCTACCATGTAGGTAACCTTGTAACATTTGCAGCTCTTGGA
rJMSF031H15+          TTTATCACGACAACCTCAATCTACCATGTAGGNAACCTTGTAACATTTGCANCTCTTGGA
rJMSF039D15+          TTTATCACGACAACCTCAATCTACCATGTAGGTAACCTTGTAACATTTGCAGCTCTTGGA
rJMSF025P16+          TTTATCACGACAACCTCAATCTACCATGTAGGTAACCTTGTAACATTTGCAGCTCTTGGA
rJMFF020H11+          TTTATCACGACAACCTCAATCTACCATGTAGGTAACCTTGTAACATTTGCAGCTCTTGGA
                      ____________________________________________________________
consensus             TTTATCACGACAACCTCAATCTACCATGTAGGTAACCTTGTAACATTTGCAGCTCTTGGA
 
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rJMSF010K03+          GGTATAACCAGCTTGTATGTGCAACAATAAATCCAATTTG                    
rJMSF033O09+          GGTATAACCAGCTTGTATGTGCA                                     
rJMSF051F15+          GGTATAACCAGCTTGTATGTGCAACAATAAATCCAATTTG                    
rJMSF049E19+          GGTATAACCAGCTTGTATGTGCAACAATAAATCCAATTTG                    
rJMSF031H15+          GGTATAACCAGCTTGTATGTGCAACAATAAATCCAATTT                     
rJMSF039D15+          GGTATAACCAGCTTGTATGTGCAACAATAAATCCAATTTG                    
rJMSF025P16+          GGTATAACCAGCTTGTATGTGCAACAATAAATCCAATTTTGTATGAATAATTT       
rJMFF020H11+          GGTATAACCAGCTTGTATGTGCAACAATAAATCCAATTTTGTATGAATAATTTACTACAA
                      ____________________________________________________________
consensus             GGTATAACCAGCTTGTATGTGCAACAATAAATCCAATTTGGTATGAATAATTTACTACAA