Contig 013692:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019J01Sequence545000100 (4)ref|XP_004243544.1|3e-34PREDICTED: SEC12-like protein 2 [Solanum lycopersicum]736013692 (4)ref|XP_009784441.1|7e-42PREDICTED: SEC12-like protein 2 [Nicotiana sylvestris]
JMSF010B18Sequence230000100 (4)774013692 (4)ref|XP_009784441.1|1e-67PREDICTED: SEC12-like protein 2 [Nicotiana sylvestris]
JMSF011A17Sequence553013692 (4)ref|XP_009784441.1|2e-30PREDICTED: SEC12-like protein 2 [Nicotiana sylvestris]
JMSF029H10Sequence654000100 (4)ref|XP_004243544.1|5e-51PREDICTED: SEC12-like protein 2 [Solanum lycopersicum]728013692 (4)gb|EYU30065.1|4e-52hypothetical protein MIMGU_mgv1a008031mg [Erythranthe guttata]

Alignment

This contig is upended


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rJMSF010B18+                                   GCTGGAAGTGGCCCTTGTAGGGTTGGGAATGTCTC
                      ____________________________________________________________
consensus                                      GCTGGAAGTGGCCCTTGTAGGGTTGGGAATGTCTC
 
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rJMSF029H10+                                                       TTTAGGCTTTTGTAG
rJMSF010B18+          AACATCTGCATCAGTGGCTTCTTTGCAGAAGGAAAATGACGAGATTTTAGGCTTTTGTAG
                      ____________________________________________________________
consensus             AACATCTGCATCAGTGGCTTCTTTGCAGAAGGAAAATGACGAGATTTTAGGCTTTTGTAG
 
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rJMSF029H10+          GTTCTCACGAAGTAGTGACAATAACCAAGCACTCTATGTCACTGCAATGCAAGGAAAAGG
rJMSF011A17+                                                     GCAATGCAAGGAAAAGG
rJMSF010B18+          GTTCTCACGAAGTAGTGACAATAACCAAGCACTCTATGTCACTGCAATGCAAGGAAAAGG
rJMFF019J01+                                                     GCAATGCAAGGAAAAGG
                      ____________________________________________________________
consensus             GTTCTCACGAAGTAGTGACAATAACCAAGCACTCTATGTCACTGCAATGCAAGGAAAAGG
 
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rJMSF029H10+          AGGAAGTATTGTGAAGTGGAGCACTGCTTCATGGAATAGGATGAGCTCAAAATGGGTTTC
rJMSF011A17+          AGGAAGTATTGTGAAGNGGAGCACTGCTTCATGGAATAGGATGAGCTCAAAATGGGTTTC
rJMSF010B18+          AGGAAGTATTGTGAAGTGGAGCACTGCTTCATGGAATAGGATGAGCTCAAAATGGGTTTC
rJMFF019J01+          AGGAAGTATTGTGAAGTGGAGCACTGCTTCATGGAATAGGATGAGCTCAAAATGGGTTTC
                      ____________________________________________________________
consensus             AGGAAGTATTGTGAAGTGGAGCACTGCTTCATGGAATAGGATGAGCTCAAAATGGGTTTC
 
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rJMSF029H10+          CCGTGACCCAATTTCAGCTTTTAATGTTTCAGCTGATGGGAAGCTCCTAGCAATTGGGAC
rJMSF011A17+          CCGTGACCCAATTTCAGCTTTTAATGTTTCAGCTGATGGGAAGCTCCTAGCAATNGGGAC
rJMSF010B18+          CCGTGACCCAATTTCAGCTTTTAATGTTTCAGCTGATGGGAAGCTCCTAGCAATTGGGAC
rJMFF019J01+          CCGTGACCCAATTTCAGCTTTTAATGTTTCAGCTGATGGGAAGCTCCTAGCAATTGGGAC
                      ____________________________________________________________
consensus             CCGTGACCCAATTTCAGCTTTTAATGTTTCAGCTGATGGGAAGCTCCTAGCAATTGGGAC
 
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rJMSF029H10+          CATTCAAGGAGATGTTCTTATCTTGAGTTCCAACTTACAAGTACTAACCACTGTTAAGAA
rJMSF011A17+          CATTCAAGGAGATGTTCTTATCTTGAGTTCCAACTTACAAGTACTAACCACTGTTAAGAA
rJMSF010B18+          CATTCAAGGAGATGTTCTTATCTTGAGTTCCAACTTACAAGTACTAACCACTGTTAAGAA
rJMFF019J01+          CATTCAAGGAGATGTTCTTATCTTGAGTTCCAACTTACAAGTACTAACCACTGTTAAGAA
                      ____________________________________________________________
consensus             CATTCAAGGAGATGTTCTTATCTTGAGTTCCAACTTACAAGTACTAACCACTGTTAAGAA
 
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rJMSF029H10+          AGCACATCTTGGTCTCGTGACTACGTTGAAGTTCTCCGACGATTCGAGGGCTTTGCTCTC
rJMSF011A17+          AGCACATCTTGGTCTCGTGACTACGTTGAAGTTCTCCGACGATTCGAGGGCTTTGCTCTC
rJMSF010B18+          AGCACATCTTGGTCTCGTGACTACGTTGAAGTTCTCCGACGATTCGAGGGCTTTGCTCTC
rJMFF019J01+          AGCACATCTTGGTCTCGTGACTACGTTGAAGTTCTCCGACGATTCGAGGGCTTTGCTCTC
                      ____________________________________________________________
consensus             AGCACATCTTGGTCTCGTGACTACGTTGAAGTTCTCCGACGATTCGAGGGCTTTGCTCTC
 
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rJMSF029H10+          TACCTCATTGGATTCAAGTGTAAGGGTGACAGTTATCAAGGACAAGTCCGATAAAAAAGG
rJMSF011A17+          TNCCTCATTGGATTCAAGTGTAAGGGTGACAGTTATCAAGGACAAGTCCGATAAAAAAGG
rJMSF010B18+          TACCTCATTGGATTCAAGTGTAAGGGTGACAGTTATCAAGGACAAGTCCGATAAAAAAGG
rJMFF019J01+          TACCTCATTGGATTCAAGTGTAAGGGTGACAGTTATCAAGGACAAGTCCGATAAAAAAGG
                      ____________________________________________________________
consensus             TACCTCATTGGATTCAAGTGTAAGGGTGACAGTTATCAAGGACAAGTCCGATAAAAAAGG
 
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rJMSF029H10+          ATTCAACTTGTGGATCATTCTTTTAATTATTCTAATGGCGATAGCTGTATATTATGCGAA
rJMSF011A17+          ATTCAACTTGTGGATCATTCTTTTAATTATTCTAATGGCGATAGCTGTATATTATGCGAA
rJMSF010B18+          ATTCAACTTGTGGATCATTCTTTTAATTATTCTAATGGCGATAGCTGTATATTATGCGAA
rJMFF019J01+          ATTCAACTTGTGGATCATTCTTTTAATTATTCTAATGGCGATAGCTGTATATTATGCGAA
                      ____________________________________________________________
consensus             ATTCAACTTGTGGATCATTCTTTTAATTATTCTAATGGCGATAGCTGTATATTATGCGAA
 
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rJMSF029H10+          ACGCGAAGAGAAACTCTCATTGCCGCTCGATTTTCCAATCAAGTTTTGAAGTATCGAAAT
rJMSF011A17+          ACGCGAAGGGAAACTCTCATTGCCGCTCGATTTTCCAATCAAGTTTTGAAGTATCGAAAT
rJMSF010B18+          ACGCGAAGGGAAACTCTCATTGCCGCTCGATTTTCCAATCAAGTTTTGAAGTATCGAAAT
rJMFF019J01+          ACGCGAAGGGAAACTCTCATTGCCGCTCGATTTTCCAATCAAGTTTTGAAGTATCGAAAT
                      ____________________________________________________________
consensus             ACGCGAAGGGAAACTCTCATTGCCGCTCGATTTTCCAATCAAGTTTTGAAGTATCGAAAT
 
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rJMSF029H10+          TTACCTCAGATCTGCAATTTGATAATTTTCAATTAATGCCTGTTTTGTAGACTGGACCTA
rJMSF011A17+          TTACCTCAGATCTGCAATTTGATAATTTTCAATTAATGCCTGTTTTGTAGACTGGACCNA
rJMSF010B18+          TTACCTCAGATCTGCAATTTGATAATTTTCAATTAATGCCTGTTTTGTAGACTGGACCTA
rJMFF019J01+          TTACCTCAGATCTGCAATTTGATAATTTTCAATTAATGCCTGTTTTGTAGACTGGACCTA
                      ____________________________________________________________
consensus             TTACCTCAGATCTGCAATTTGATAATTTTCAATTAATGCCTGTTTTGTAGACTGGACCTA
 
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rJMSF029H10+          GGTTCTGGATTTGGTGGAAC-TGATCACCAAACACTGTAATCTGTTTTGTTTTTGTACAT
rJMSF011A17+          GGTTCNGGATTTGGTGGACCATNATCACCAAACACTGTAATCTGTTTTGTT         
rJMSF010B18+          GGTTCTGGATTTGGTGGAAC-TGATCACCAAACACTGTAATCTGTTTTGTTTTTGTACAT
rJMFF019J01+          GGTTCTGGATTTGGTGGAAC-TGATCACCAAACACTGTAATCTGTTTTGTTTTTGTACAT
                      ____________________________________________________________
consensus             GGTTCTGGATTTGGTGGAAC-TGATCACCAAACACTGTAATCTGTTTTGTTTTTGTACAT
 
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rJMSF029H10+          AGTTTTTAGATGAATGGTTTCCCTCTCTTAGAAATAAAACTCCGAGACCAGAACGTCATG
rJMSF010B18+          AGTTTTTAGATGAATGGTTTCCCTCTCTTAGAAATAAAACTCCGAGACCAGAACGTCATG
rJMFF019J01+          AGTTTTTAGATGAATGGTTTCCCTCTCTTAGAAATAAAACTCCGAGACCAGAACGTCATG
                      ____________________________________________________________
consensus             AGTTTTTAGATGAATGGTTTCCCTCTCTTAGAAATAAAACTCCGAGACCAGAACGTCATG
 
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rJMSF029H10+          CTCTTAGAGTGTACGTATC                                         
rJMSF010B18+          CTCTTAGAGTGTACGTATC                                         
rJMFF019J01+          CTCTTAGAGTGTACGTATCAGTAACAGTTATTATACCGATATATTGATATTGATGTTACA
                      ____________________________________________________________
consensus             CTCTTAGAGTGTACGTATCAGTAACAGTTATTATACCGATATATTGATATTGATGTTACA
 
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rJMFF019J01+          TACATTGACTTTGATAAAATCGTATGAATGTCATTATACCAGGATTTGAACATTTTACCT
                      ____________________________________________________________
consensus             TACATTGACTTTGATAAAATCGTATGAATGTCATTATACCAGGATTTGAACATTTTACCT