Contig 013688:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN033H08+                                                                 TGTAAT
JMFN020E20+                                         AGACCAGGAAAAGACAATCAATTCTGTAAT
rJMFF018M12-                                                                TGTAAT
                      ____________________________________________________________
consensus                                           AGACCAGGAAAAGACAATCAATTCTGTAAT
 
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JMFN033H08+           AATAACGCGATATTGCAGGTAAATCCAAGTTCTCGCTGCAACAAGGGTATGCAAATCCTT
JMFN020E20+           AATAACACGATATTACAGGTAAATCCAAGTTCTCGCTGCAACAAGGGTATGCAAATCCTT
rJMFF018M12-          AATAACACGATATTACAGGTAAATCCAAGTTCTCGCTGCAACAAGGGTATGCAAATCCTT
                      ____________________________________________________________
consensus             AATAACACGATATTACAGGTAAATCCAAGTTCTCGCTGCAACAAGGGTATGCAAATCCTT
 
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JMFN033H08+           GAAAGATAAAACAACATTTAAAACACACAAAAGTAACATGGAGATCACAAAGTAGAATTC
JMFN020E20+           GAAAGATAAAACAACATTTAAAACACACAAAAGTAACATGGAGATCACAAAGTAGAATTC
rJMFF018M12-          GAAAGATAAAACAACATTTAAAACACACAAAAGTAACATGGAGATCACAAAGTAGAATTC
                      ____________________________________________________________
consensus             GAAAGATAAAACAACATTTAAAACACACAAAAGTAACATGGAGATCACAAAGTAGAATTC
 
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JMFN033H08+           TTTAAAAGCCCTATAGCAGATAACTCTGAGTCTCTCATTATTATGTATCGATATGGTTTA
JMFN020E20+           TTTAAAAGCCCTATAGCAGATAACTCTGAGTCTCTCATTATTATGTATCGATATGGTTTA
rJMFF018M12-          TTTAAAAGCCCTATAGCAGATAACTCTGAGTCTCTCATTATTATGTATCGATATGGTTTA
                      ____________________________________________________________
consensus             TTTAAAAGCCCTATAGCAGATAACTCTGAGTCTCTCATTATTATGTATCGATATGGTTTA
 
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JMFN033H08+           TCTCATCTTCAAATGTCGCCATGGCCAAGCAAAGCCAAGAGCATGTCTTCATAGTCACCA
JMFN020E20+           TCTCATCTTCAAATGTCGCCATGGCCAAGCAAAGCCAAGAGCATGTCTTCATAGTCACCA
rJMFF018M12-          TCTCATCTTCAAATGTCGCCATGGCCAAGCAAAGCCAAGAGCATGTCTTCATAGTCACCA
                      ____________________________________________________________
consensus             TCTCATCTTCAAATGTCGCCATGGCCAAGCAAAGCCAAGAGCATGTCTTCATAGTCACCA
 
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JMFN033H08+           TGGGTGTCTTTGGCAATGGCCCGGTCTAGAGGGATGCTATTCACTTTCTGGAACTCCTCA
JMFN020E20+           TGGGTGTCTTTGGCAATGGCCCGGTCTAGAGGGATGCTATTCACTTTCTGGAACTCCTCA
rJMFF018M12-          TGGGTGTCTTTGGCAATGGCCCGGTCTAGAGGGATGCTATTCACTTTCTGGAACTCCTCA
                      ____________________________________________________________
consensus             TGGGTGTCTTTGGCAATGGCCCGGTCTAGAGGGATGCTATTCACTTTCTGGAACTCCTCA
 
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JMFN033H08+           GCTATGACCTTCAAATCAACCTCAGCTCTCGTTGCAACAACTCTTGTCAGGTCGCTTTCG
JMFN020E20+           GCTATGACCTTCAAATCAACCTCAGCTCTCGTTGCAACAACTCTTGTCAGGTCGCTTTCG
rJMFF018M12-          GCTATGACCTTCAAATCAA-CTCAGCTCTCGTTGCAACAACTCTTGTCAGGTCGCTTTCG
                      ____________________________________________________________
consensus             GCTATGACCTTCAAATCAACCTCAGCTCTCGTTGCAACAACTCTTGTCAGGTCGCTTTCG
 
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JMFN033H08+           TCTGTGCCCCTCTTGTTGATTGCACCGCGAAGTACCTCAACAAAGTACTTCTCAGGGTGG
JMFN020E20+           TCTGTGCCCCTCTTGTTGATTGCACCGCGAAGTACCTCAACAAAGTACTTCTCAGGGTAG
rJMFF018M12-          TCTGTGCCCCTCTTGTTGATTGCACCGCGAAGTACCTCAACAAAGTACTTCTCAGGGTAG
                      ____________________________________________________________
consensus             TCTGTGCCCCTCTTGTTGATTGCACCGCGAAGTACCTCAACAAAGTACTTCTCAGGGTAG
 
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JMFN033H08+           AGAAGAGACTGGATAGTAGCTCTTAGTATTGCAGGGAATTCATCCTTTTCATCAGCTTCC
JMFN020E20+           AGAAGAGACTGGATAGTAGCTCTTAGTATTGCAGGGAATTCATCCTTTTCATCAGCTTCC
rJMFF018M12-          AGAAGAGACTGGATAGTAGCTCTTAGTATTGCAGGGAATTCATCCTTTTCATCAGCTTCC
                      ____________________________________________________________
consensus             AGAAGAGACTGGATAGTAGCTCTTAGTATTGCAGGGAATTCATCCTTTTCATCAGCTTCC
 
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JMFN033H08+           AAATCCTTGAGAATATCTTGTCCATATTCA                              
JMFN020E20+           AAATCCTTGAGAATATCTTGTCCATATTCATCTCTATAGTGATTCAAGGTTGCATTGATC
rJMFF018M12-          AAATCCTTGAGAATATCTTGTCCATATTCATCTCTATAGTGATTCAAGGTTGCATTGATC
                      ____________________________________________________________
consensus             AAATCCTTGAGAATATCTTGTCCATATTCATCTCTATAGTGATTCAAGGTTGCATTGATC
 
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JMFN020E20+           TGGGATTTGCTCCTTGTGGCCAGAATTCTAATCACATCATCATCAGC             
rJMFF018M12-          TGGGATTTGCTTCTTGTGGCCAGAATTCTAATCACATCATCATCAGCATAGCACTTGTCT
                      ____________________________________________________________
consensus             TGGGATTTGCTTCTTGTGGCCAGAATTCTAATCACATCATCATCAGCATAGCACTTGTCT
 
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rJMFF018M12-          GAGATCTTCTCATGCAGGATTCTAGCCTCACGCTTAGCAAGAGTCATGTTCACCTCATCA
                      ____________________________________________________________
consensus             GAGATCTTCTCATGCAGGATTCTAGCCTCACGCTTAGCAAGAGTCATGTTCACCTCATCA
 
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rJMFF018M12-          CCCCCGTAGCGATATGAGGTCACCAGAAGTACCAAAAGCTTGCGGAAGTCCCCAGTTGTG
                      ____________________________________________________________
consensus             CCCCCGTAGCGATATGAGGTCACCAGAAGTACCAAAAGCTTGCGGAAGTCCCCAGTTGTG
 
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rJMFF018M12-          TGCTGTGCAACATCCTCTTCNAGGGATTTCTTATAACGAGCATGATAAGCTTCTCTGACA
                      ____________________________________________________________
consensus             TGCTGTGCAACATCCTCTTCNAGGGATTTCTTATAACGAGCATGATAAGCTTCTCTGACA