| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008C10 | Sequence | 564 | 005177 (5) | ref|XP_004228630.1| | 7e-99 | PREDICTED: cysteine protease ATG4 isoform X2 [Solanum lycopersicum] | 778 | 013683 (5) | ref|XP_009588897.1| | 6e-95 | PREDICTED: cysteine protease ATG4-like isoform X2 [Nicotiana tomentosiformis] |
| JMFF008L01 | Sequence | 545 | 005177 (5) | ref|XP_009761431.1| | 4e-96 | PREDICTED: cysteine protease ATG4-like isoform X2 [Nicotiana sylvestris] | 655 | 013683 (5) | ref|XP_009588897.1| | 7e-79 | PREDICTED: cysteine protease ATG4-like isoform X2 [Nicotiana tomentosiformis] |
| JMFF018D07 | Sequence | 570 | 005177 (5) | ref|XP_009761431.1| | 1e-17 | PREDICTED: cysteine protease ATG4-like isoform X2 [Nicotiana sylvestris] | 500 | 013683 (5) | ref|XP_009588897.1| | 8e-20 | PREDICTED: cysteine protease ATG4-like isoform X2 [Nicotiana tomentosiformis] |
| JMFF039C07 | Sequence | 473 | 005177 (5) | ref|XP_009761430.1| | 3e-11 | PREDICTED: cysteine protease ATG4-like isoform X1 [Nicotiana sylvestris] | 691 | 013683 (5) | ref|XP_009761431.1| | 8e-81 | PREDICTED: cysteine protease ATG4-like isoform X2 [Nicotiana sylvestris] |
| JMSF032G07 | Sequence | 622 | 005177 (5) | ref|XP_009761431.1| | 5e-20 | PREDICTED: cysteine protease ATG4-like isoform X2 [Nicotiana sylvestris] | 740 | 013683 (5) | ref|XP_009588897.1| | 4e-83 | PREDICTED: cysteine protease ATG4-like isoform X2 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF008C10+ CTGGGGATGAAGATGGAGAAAGGGGCGGTGCACCAGCCCTTTGCATTGA
rJMSF032G07+ GCATTGA
____________________________________________________________
consensus CTGGGGATGAAGATGGAGAAAGGGGCGGTGCACCAGCCCTTTGCATTGA
. : . : . : . : . : . :
rJMFF039C07+ CTCGAGTTGTCAAAAGGCCAAGTTGATTGGGCTCCTATAAT
rJMFF008C10+ TGATATCTCAAGGCGATGCCTCGAGTTGTCAAAAGGCCAAGTTGATTGGGCTCCTATAAT
rJMSF032G07+ TGATATCTCAAGGCGATGCCTCGAGTTGTCAAAAGGCCAAGTTGGTTGGGCTCCTATAAT
____________________________________________________________
consensus TGATATCTCAAGGCGATGCCTCGAGTTGTCAAAAGGCCAAGTTGATTGGGCTCCTATAAT
. : . : . : . : . : . :
rJMFF039C07+ TTTGTTGGTTCCCTTGGTCTTAGGACTCGACAAGGTTAACCCAAGGTATATTCCCTTGTT
rJMFF008C10+ TTTGTTGGTTCCCTTGGTCTTAGGACTCGACAAGGTTAACCCAAGGTATATTCCCTTGTT
rJMFF008L01+ TGGTCTTAGGACTCGACAAGGTTAACCCAAGGTATATTCCCTTGTT
rJMSF032G07+ TTTGTTGGTTCCCTTGGTCTTAGGACTCGACAAGGTTAACCCAAGGTATATTCCCTTGTT
____________________________________________________________
consensus TTTGTTGGTTCCCTTGGTCTTAGGACTCGACAAGGTTAACCCAAGGTATATTCCCTTGTT
. : . : . : . : . : . :
rJMFF039C07+ AAAAGCTACATTCAGCTTCCCCCAAAGCCTGGGAATCCTTGGTGGTAGACCTGGAGTCTC
rJMFF008C10+ AAAAGCTACATTCAGCTTCCCCCAAAGCCTGGGAATCCTTGGTGGTAGACCTGGAGTCTC
rJMFF008L01+ AAAAGCTACATTCAGCTTCCCCCAAAGCCTGGGAATCCTTGGTGGTAGACCTGGAGTCTC
rJMSF032G07+ AAAAGCTACATTCAGCTTCCCCCAAAGCCTGGGAATCCTTGGTGGTAGACCTGGAGTCTC
____________________________________________________________
consensus AAAAGCTACATTCAGCTTCCCCCAAAGCCTGGGAATCCTTGGTGGTAGACCTGGAGTCTC
. : . : . : . : . : . :
rJMFF039C07+ AACATACATTGTTGGTGTGCAGGATGATCAGGCATTTTATCTTGATCCACATGAAGTTCA
rJMFF008C10+ AACATACATTGTTGGTGTGCAGGATGATCAGGCATTTTATCTTGATCCACATGAAGTTCA
rJMFF008L01+ AACATACATTGTTGGTGTGCAGGATGATCAGGCATTTTATCTTGATCCACATGAAGTTCA
rJMSF032G07+ AACATACATTGTTGGTGTGCAGGATGATCAGGCATTTTATCTTGATCCACATGAAGTTCA
____________________________________________________________
consensus AACATACATTGTTGGTGTGCAGGATGATCAGGCATTTTATCTTGATCCACATGAAGTTCA
. : . : . : . : . : . :
rJMFF039C07+ ACAAGTTGTTGATCTTGGGAGGGATAATTTAGATATCGACACTTCATCCTACCACTGCGA
rJMFF008C10+ ACAAGTTGTTGATCTTGGGAGGGATAATTTAGATATCGACACTTCATCCTACCACTGCGA
rJMFF008L01+ ACAAGTTGTTGATCTTGGGAGGGATAATTTAGATATCGACACTTCATCCTACCACTGCGA
rJMSF032G07+ ACAAGTTGTTGATCTTGGGAGGGATAATTTAGATATCGACACTTCATCCTACCACTGCGA
____________________________________________________________
consensus ACAAGTTGTTGATCTTGGGAGGGATAATTTAGATATCGACACTTCATCCTACCACTGCGA
. : . : . : . : . : . :
rJMFF039C07+ TGTTGTGCGGCAGCTCCCACTTGATTCCATTGATCCATCCTTGGCTATCGGGTTTTACTG
rJMFF008C10+ TGTTGTGCGGCAGCTCCCACTTGATTCCATTGATCCATCCTTGGCTATCGGGTTTTACTG
rJMFF008L01+ TGTTGTGCGGCAGCTCCCACTTGATTCCATTGATCCATCCTTGGCTATCGGGTTTTACTG
rJMSF032G07+ TGTTGTGCGGCAGCTCCCACTTGATTCCATTGATCCATCCTTGGCTATCGGGTTTTACTG
rJMFF018D07+ TTGGCTATCGGGTTTTACTG
____________________________________________________________
consensus TGTTGTGCGGCAGCTCCCACTTGATTCCATTGATCCATCCTTGGCTATCGGGTTTTACTG
. : . : . : . : . : . :
rJMFF039C07+ CAAAGACAAGAGCGATTTTGATGATTTTTGTGCACGAGCATCGGAGCTGGTTGATCAATC
rJMFF008C10+ CAAAGACAAGAGCGATTTTGATGATTTTTGTGCACGAGCATCGGAGCTGGTTGATCAATC
rJMFF008L01+ CAAAGACAAGAGCGATTTTGATGATTTTTGTGCACGAGCATCGGAGCTGGTTGATCAATC
rJMSF032G07+ CAAAGACAAGAGCGATTTTGATGATTTTTGTGCACGAGCATCGGAGCTGGTTGATCAATC
rJMFF018D07+ CAAAGACAAGAGCGATTTTGATGATTTTTGTGCACGAGCATCGGAGCTGGTTGATCAATC
____________________________________________________________
consensus CAAAGACAAGAGCGATTTTGATGATTTTTGTGCACGAGCATCGGAGCTGGTTGATCAATC
. : . : . : . : . : . :
rJMFF039C07+ AGGTGGTGCTCCACTGTTCACCATAACCGAGACTCGGAATGTCTCCATGCCAGTCCAATA
rJMFF008C10+ AGGTGGTGCTCCACTGTTCACCATAACCGAGACTCGGAATGTCTCCATGCCAGTCCAATA
rJMFF008L01+ AGGTGGTGCTCCACTGTTCACCATAACCGAGACTCGGAATGTCTCCATGCCAGTCCAATA
rJMSF032G07+ AGGTGGTGCTCCACTGTTCACCATAACCGAGACTCGGAATGTCTCCATGCCAGTCCAATA
rJMFF018D07+ AGGTGGTGCTCCACTGTTCACCATAACCGAGACTCGGAATGTCTCCATGCCAGTCCAATA
____________________________________________________________
consensus AGGTGGTGCTCCACTGTTCACCATAACCGAGACTCGGAATGTCTCCATGCCAGTCCAATA
. : . : . : . : . : . :
rJMFF039C07+ TCAAGATATGCAGGGCGAGGCGAGTGCAGAAGGATTCAAGTCATTCGATGCAACCTCCAT
rJMFF008C10+ TCAAGATATGCAGGGCGAGGCGAGTGCAGAAGGATTCAAGTCATTCGATGCAACCTCCAT
rJMFF008L01+ TCAAGATATGCAGGGCGAGGCGAGTGCAGAAGGATTCAAGTCATTCGATGCAACCTCCAT
rJMSF032G07+ TCAAGATATGCAGGGCGAGGCGAGTGCAGAAGGATTCAAGTCATTCGATGCAACCTCCAT
rJMFF018D07+ TCAAGATATGCAGGGCGAGGCGAGTGCAGAAGGATTCAAGTCATTCGATGCAACCTCCAT
____________________________________________________________
consensus TCAAGATATGCAGGGCGAGGCGAGTGCAGAAGGATTCAAGTCATTCGATGCAACCTCCAT
. : . : . : . : . : . :
rJMFF039C07+ TGGTGATTCGGAGAACGGTAAACAAGAAGAT-GACTGGCAACTTCTTTGAAGCTGGATCT
rJMFF008C10+ TGGTGATTCGGAGAACGGTAAACAAGAAGAT-GACTGGCAACTTCTTTGAAGCTGGATCT
rJMFF008L01+ TGGTGATTCGGAGAACGGTAAACAAGAAGAT-GACTGGCAACTTCTTTGAAGCTGGATCT
rJMSF032G07+ TGGTGATTCGGAGAACGGTAAACAAGAAGAT-GACTGGCAACTTCTTTGAAGCTGGATCT
rJMFF018D07+ TGGTGATTCGGAGAACGGTAAACAAGAAGATGGACTGGCAACTTCTTTGAAGCTGGATCT
____________________________________________________________
consensus TGGTGATTCGGAGAACGGTAAACAAGAAGAT-GACTGGCAACTTCTTTGAAGCTGGATCT
. : . : . : . : . : . :
rJMFF039C07+ GTGTTTGTATTTCCTGCCCTACCCAATTCTCAGGGGAGGGTTGAAAACTGTAAAGATAAA
rJMFF008C10+ GTGTTTGTATTTCCTGCCCTACCCAATTCTCAGGGGAGGGTTGAAAACTGTAAAGATAAA
rJMFF008L01+ GTGTTTGTATTTCCTGCCCTACCCAATTCTCAGGGGAGGGTTGAAAACTGTAAAGATAAA
rJMSF032G07+ GTGTTTGTATTTCCTGCCCTACCCAATTCTCAGGGGAGGGTTGAAAACTGTAAAGATAAA
rJMFF018D07+ GTGTTTGTATTTCCTGCCCTACCCAATTCTCAGGGGAGGGTTGAAAACTGTAAAGATAAA
____________________________________________________________
consensus GTGTTTGTATTTCCTGCCCTACCCAATTCTCAGGGGAGGGTTGAAAACTGTAAAGATAAA
. : . : . : . : . : . :
rJMFF039C07+ CAACACGTATTAGGCTCTGTTATTAGCTTCAGTT
rJMFF008C10+ CAACACGTATTAGGCTCTGTTATTAGCTTCAGTTTGAAATGTTGTTATTTTTTATTGATA
rJMFF008L01+ CAACACGTATTAGGCTCTGTTATTAGCTTCAGTTTGAAATGTTGTTATTTTTTATTGATA
rJMSF032G07+ CAACACGTATTAGGCTCTGTTATTAGCTTCAGTTTGAAATGTTGTTATTTTTTATTGATA
rJMFF018D07+ CAACACGTATTAGGCTCTGTTATTAGCTTCAGTTTGAAATGTTGTTATTTTTTATTGATA
____________________________________________________________
consensus CAACACGTATTAGGCTCTGTTATTAGCTTCAGTTTGAAATGTTGTTATTTTTTATTGATA
. : . : . : . : . : . :
rJMFF008C10+ TTTT
rJMFF008L01+ TTTT
rJMSF032G07+ TTTT
rJMFF018D07+ TTTTTGAAACTTGAATGATATGTGATATTCATTACATTATTTGGGAATAGATTTTATTCT
____________________________________________________________
consensus TTTTTGAAACTTGAATGATATGTGATATTCATTACATTATTTGGGAATAGATTTTATTCT
. : . : . : . : . : . :
rJMFF018D07+ TTCTTTTCAATTATTGGGTGGGGATTCGAGTACGTTGAACATTGAGGAATGATAGCTTAA
____________________________________________________________
consensus TTCTTTTCAATTATTGGGTGGGGATTCGAGTACGTTGAACATTGAGGAATGATAGCTTAA