Contig 013682:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018C18Sequence529012113 (3)ref|XP_006351637.1|3e-52PREDICTED: probable fructokinase-4-like [Solanum tuberosum]759013682 (3)ref|XP_009757358.1|1e-69PREDICTED: fructokinase-1 [Nicotiana sylvestris]
JMSF038B17Sequence722012113 (3)ref|XP_006351637.1|6e-58PREDICTED: probable fructokinase-4-like [Solanum tuberosum]872013682 (3)ref|XP_009757358.1|1e-88PREDICTED: fructokinase-1 [Nicotiana sylvestris]
JMSF039L03Sequence680012113 (3)ref|XP_006351637.1|1e-49PREDICTED: probable fructokinase-4-like [Solanum tuberosum]867013682 (3)ref|XP_009757358.1|3e-82PREDICTED: fructokinase-1 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF039L03+                                       TTCAGGAAGACCTGAAGAACAGAGAGCAGCT
rJMSF038B17+                             CTGACCCTTGTTCAGGAAGACCTGAAGAACAGAGAGCAGCT
                      ____________________________________________________________
consensus                                CTGACCCTTGTTCAGGAAGACCTGAAGAACAGAGAGCAGCT
 
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rJMSF039L03+          GACAAATTCTTCCAAGATGAGTGATGTGCTTCTTTTGACTTCTGAAGAGGCAGGATCGTT
rJMSF038B17+          GACAAATTCTT-CAAGATGAGTGATGTGCTTCTTTTGACTTCTGAAGAGGCAGGATCGTT
                      ____________________________________________________________
consensus             GACAAATTCTTCCAAGATGAGTGATGTGCTTCTTTTGACTTCTGAAGAGGCAGGATCGTT
 
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rJMSF039L03+          GACTGGCATTGAAAATCCAATTATGGCAGGGCAAGAGTTGCTAAAGAAAGGAGCCCGTCT
rJMSF038B17+          GACTGGCATTGAAAATCCAATTATGGCAGGGCAAGAGTTGCTAAAGAAAGGAGCCCGTCT
rJMFF018C18+                               TATGGCAGGGCAAGAGTTGCTAAAGAAAGGAGCCCGTCT
                      ____________________________________________________________
consensus             GACTGGCATTGAAAATCCAATTATGGCAGGGCAAGAGTTGCTAAAGAAAGGAGCCCGTCT
 
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rJMSF039L03+          TAAGTGGGTGATTGTTAAGATGGGTGCAAAGGGTTCAATTTTGATCACCAAATCAAGTAT
rJMSF038B17+          TAAGTGGGTGATTGTTAAGATGGGTGCAAAGGGTTCAATTTTGATCACCAAATCAAGTAT
rJMFF018C18+          TAAGTGGGTGATTGTTAAGATGGGTGCAAAGGGTTCAATTTTGATCACCAAATCAAGTAT
                      ____________________________________________________________
consensus             TAAGTGGGTGATTGTTAAGATGGGTGCAAAGGGTTCAATTTTGATCACCAAATCAAGTAT
 
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rJMSF039L03+          AACTTGTGCCCCTGGATTCAAGGTGAATGTTATTGACACTGTTGGGTGTGGAGACAGCTT
rJMSF038B17+          AACTTGTGCCCCTGGATTCAAGGTGAATGTTATTGACACTGTTGGGTGTGGAGACAGCTT
rJMFF018C18+          AACTTGTGCCCCTGGATTCAAGGTGAATGTTATTGACACTGTTGGGTGTGGAGACAGCTT
                      ____________________________________________________________
consensus             AACTTGTGCCCCTGGATTCAAGGTGAATGTTATTGACACTGTTGGGTGTGGAGACAGCTT
 
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rJMSF039L03+          TGTGGCTGCCGTTGCATTTGGTTTTATACACAATGTGCCATTGGTATATACTCTAACCCT
rJMSF038B17+          TGTGGCTGCCGTTGCATTTGGTTTTATACACAATGTGCCATTGGTATATACTCTAACCCT
rJMFF018C18+          TGTGGCTGCCGTTGCATTTGGTTTTATACACAATGTGCCATTGGTATATACTCTAACCCT
                      ____________________________________________________________
consensus             TGTGGCTGCCGTTGCATTTGGTTTTATACACAATGTGCCATTGGTATATACTCTAACCCT
 
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rJMSF039L03+          GGCAAATGCAGTGGGCGGTGCAACTGCTATGGGTTGTGGTGCTGGTAGAAATGTCGCGAC
rJMSF038B17+          GGCAAATGCAGTGGGCGGTGCAACTGCTATGGGTTGTGGTGCTGGTAGAAATGTCGCGAC
rJMFF018C18+          GGCAAATGCAGTGGGCGGTGCAACTGCTATGGGTTGTGGTGCTGGTAGAAATGTCGCGAC
                      ____________________________________________________________
consensus             GGCAAATGCAGTGGGCGGTGCAACTGCTATGGGTTGTGGTGCTGGTAGAAATGTCGCGAC
 
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rJMSF039L03+          CCTAGAGCAAGTGAAGGAACTCATGAGAAGATCAGATATTAACGAGGATGAAAAGTTATG
rJMSF038B17+          CCTAGAGCAAGTGAAGGAACTCATGAGAAGATCAGATATTAACGAGGATGAAAAGTTATG
rJMFF018C18+          CCTAGAGCAAGTGAAGGAACTCATGAGAAGATCAGATATTAACGAGGATGAAAAGTTATG
                      ____________________________________________________________
consensus             CCTAGAGCAAGTGAAGGAACTCATGAGAAGATCAGATATTAACGAGGATGAAAAGTTATG
 
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rJMSF039L03+          GGAGGAGTTACTTAGTGATAGTGTAGGAACCTTAGAAGTAAATTTACTCTCAAGATCACT
rJMSF038B17+          GGAGGAGTTACTTAGTGATAGTGTAGGAACCTTAGAAGTAAATTTACTCTCAAGATCACT
rJMFF018C18+          GGAGGAGTTACTTAGTGATAGTGTAGGAACCTTAGAAGTAAATTTACTCTCAAGATCACT
                      ____________________________________________________________
consensus             GGAGGAGTTACTTAGTGATAGTGTAGGAACCTTAGAAGTAAATTTACTCTCAAGATCACT
 
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rJMSF039L03+          CATAGACCAGAACAGCCAACAGCTTAACGTAGTTCCCCTGCAAAGGGCGGTCTCTGAAAT
rJMSF038B17+          CATAGACCAGAACAGCCAACAGCTTAACGTAGTTCCCCTGCAAAGGGCGGTCTCTGAAAT
rJMFF018C18+          CATAGACCAGAACAGCCAACAGCTTAACGTAGTTCCCCTGCAAAGGGCGGTCTCTGAAAT
                      ____________________________________________________________
consensus             CATAGACCAGAACAGCCAACAGCTTAACGTAGTTCCCCTGCAAAGGGCGGTCTCTGAAAT
 
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rJMSF039L03+          TCTACCCAAGCTCTTACCTACTCAGTCAAAGATGGCCATCGTTTCTTCACTGTCATGAAC
rJMSF038B17+          TCTACCCAAGCTCTTACCTACTCAGTCAAAGATGGCCATCGTTTCTTCACTGTCATGAAC
rJMFF018C18+          TCTACCCAAGCTCTTACCTACTCAGTCAAAGATGGCCATCGTTTCTTCACTGTCATGAAC
                      ____________________________________________________________
consensus             TCTACCCAAGCTCTTACCTACTCAGTCAAAGATGGCCATCGTTTCTTCACTGTCATGAAC
 
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rJMSF039L03+          AGACGTTATGATGGTAGATTGGTTATATTTGCTATAGTCATCAACATATGATTACTATCG
rJMSF038B17+          AGACGTTATGATGGTAGATTGGTTATATTTGCTATAGTCATCAACATATGATTACTATCG
rJMFF018C18+          AGACGTTATGATGGTAGATTGGTTATATTTGCTATAGTCATCAACATATGATTACTATCG
                      ____________________________________________________________
consensus             AGACGTTATGATGGTAGATTGGTTATATTTGCTATAGTCATCAACATATGATTACTATCG
 
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rJMSF039L03+          CCTTACTCCTCACCACAAAAACACAGCTCAAGATTGGAGATGAATGGTAAGTTGAGACAA
rJMSF038B17+          CCTTACTCCTCACCACAAAAACACAGCTCAAGATTGGAGATGAATGGTAAGTTGAGACAA
rJMFF018C18+          CCTTACTCCTCACCACAAAAACACAGCTCAAGATTGGAGATGAATGGTAAGTTGAGACAA
                      ____________________________________________________________
consensus             CCTTACTCCTCACCACAAAAACACAGCTCAAGATTGGAGATGAATGGTAAGTTGAGACAA
 
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rJMSF039L03+          TATTTTAGTTTCAGGGAAGGGTGCTCAATATTGTGGGTTGTATTTTTACCATCTTGATGA
rJMSF038B17+          TATTTTAGTTTCAGGGAAGGGTGCTCAATATTGTGGGTTGTATTTTTACCATCTTGATGA
rJMFF018C18+          TATTTTAGTTTCAGGGAAGGGTGCTCAATATTGTGGGTTGTATTTTTACCATCTTGATGA
                      ____________________________________________________________
consensus             TATTTTAGTTTCAGGGAAGGGTGCTCAATATTGTGGGTTGTATTTTTACCATCTTGATGA
 
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rJMSF039L03+          TTAAATAAACTTATAGCGCACGATTTACACAATCAATTCTTGTAATTTA           
rJMSF038B17+          TTAAATAAACTTATAGCGCACGATTTACACAATCAATTCTTGTAATTTA           
rJMFF018C18+          TTAAATAAACTTATAGCGCACGATTTACACAATCAATTCTTGTAATTTACTTGGCACAGC
                      ____________________________________________________________
consensus             TTAAATAAACTTATAGCGCACGATTTACACAATCAATTCTTGTAATTTACTTGGCACAGC