Contig 013681:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017P12Sequence494013681 (2)771013681 (2)ref|XP_009795684.1|112PREDICTED: uncharacterized protein LOC104242346 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF017P12-                          GGCTTTGGTAAAAGACGGGGGTTCCCTTCCATGGTGACTACAACT
                      ____________________________________________________________
consensus                            GGCTTTGGTAAAAGACGGGGGTTCCCTTCCATGGTGACTACAACT
 
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JMFF017P12-           CATATGCTTCAATCCCTCACTACTACTGCTCTTCTCAATCGCACTTCATCAAGCACCGTA
                      ____________________________________________________________
consensus             CATATGCTTCAATCCCTCACTACTACTGCTCTTCTCAATCGCACTTCATCAAGCACCGTA
 
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JMFF017P12-           TGCTGCTTCTCAGCCAGGAACGGCGGCCGTAGCGGCGGCTCCAGGTGGGAGAGCAGAACT
rJMFF017P12+                   TCAGCCAGGAACGGCGGCCGTAGCGGCGGCTCCAGGTGGGAGAGCAGAACT
                      ____________________________________________________________
consensus             TGCTGCTTCTCAGCCAGGAACGGCGGCCGTAGCGGCGGCTCCAGGTGGGAGAGCAGAACT
 
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JMFF017P12-           GGAAATGGCCAGCAACGGTTCAGATTTGACGAGGAGGAGCTCCGAGCTAACGGCGGCGAA
rJMFF017P12+          GGAAATGGCCAGCAACGGTTCAGATTTGACGAGGAGGAGCTCCGAGCTAACGGCGGCGAA
                      ____________________________________________________________
consensus             GGAAATGGCCAGCAACGGTTCAGATTTGACGAGGAGGAGCTCCGAGCTAACGGCGGCGAA
 
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JMFF017P12-           AAAGATGCGGAATTCGGTTTCGGTGCCGCCACCAAGCAGAGGATTTGGTGGTCCGATGAT
rJMFF017P12+          AAAGATGCGGAATTCGGTTTCGGTGCCGCCACCAAGCAGAGGATTTGGTGGTCCGATGAT
                      ____________________________________________________________
consensus             AAAGATGCGGAATTCGGTTTCGGTGCCGCCACCAAGCAGAGGATTTGGTGGTCCGATGAT
 
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JMFF017P12-           GACTCCTCCCGGGGCGATGGCTTTGATGATGAATATGAAGATTTTGAAGGGTTTGGAGAA
rJMFF017P12+          GACTCCTCCCGGGGCGATGGCTTTGATGATGAATATGAAGATTTTGAAGGGTTTGGAGAA
                      ____________________________________________________________
consensus             GACTCCTCCCGGGGCGATGGCTTTGATGATGAATATGAAGATTTTGAAGGGTTTGGAGAA
 
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JMFF017P12-           TTAGAGGGCTCCATTGGCTTTTCTTGGATATTCAAGGAACATCCTATGACCGTGCAAGAC
rJMFF017P12+          TTAGAGGGCTCCATTGGCTTTTCTTGGATATTCAAGGAACATCCTATGACCGTGCAAGAC
                      ____________________________________________________________
consensus             TTAGAGGGCTCCATTGGCTTTTCTTGGATATTCAAGGAACATCCTATGACCGTGCAAGAC
 
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JMFF017P12-           CAAAGTCCAGGACAAGGAAGCGGCCATATGCCAGAGCCAAAGCCAATGCTAGAACGAGAG
rJMFF017P12+          CAAAGTCCAGGACAAGGAAGCGGCCATATGCCAGAGCCAAAGCCAATGCTAGAACGAGAG
                      ____________________________________________________________
consensus             CAAAGTCCAGGACAAGGAAGCGGCCATATGCCAGAGCCAAAGCCAATGCTAGAACGAGAG
 
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JMFF017P12-           AGGGAGAACAAAATACCCAGAGCGGGAAG                               
rJMFF017P12+          AGGGAGAACAAAATACCCAGAGCGGGAAGGGAGTTAGGGGATATGGATCAAATGATGTTT
                      ____________________________________________________________
consensus             AGGGAGAACAAAATACCCAGAGCGGGAAGGGAGTTAGGGGATATGGATCAAATGATGTTT
 
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rJMFF017P12+          CAAATGAAAAGGAGGCGAAAACGACGCAAAATTTTGGTGGATGGGATGAACTAGATAACC
                      ____________________________________________________________
consensus             CAAATGAAAAGGAGGCGAAAACGACGCAAAATTTTGGTGGATGGGATGAACTAGATAACC
 
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rJMFF017P12+          CAGGGACTACATCTGCAAACAAAACGCCTAAAACAACCAGACTGCGGAGTGAAGGCAAAT
                      ____________________________________________________________
consensus             CAGGGACTACATCTGCAAACAAAACGCCTAAAACAACCAGACTGCGGAGTGAAGGCAAAT
 
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rJMFF017P12+          TGAGCCGGAGAATAAGCAAGAAAGAAACACCATTGCTGTTGAGGCTACTCATCGCGGTCT
                      ____________________________________________________________
consensus             TGAGCCGGAGAATAAGCAAGAAAGAAACACCATTGCTGTTGAGGCTACTCATCGCGGTCT
 
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rJMFF017P12+          TCCCATTCTTGGGATCCTGGACAAAGGTATTGTAATTCTACTGCATTGTTCTTATCTGCA
                      ____________________________________________________________
consensus             TCCCATTCTTGGGATCCTGGACAAAGGTATTGTAATTCTACTGCATTGTTCTTATCTGCA
 
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rJMFF017P12+          ACTGTATTGTAACTCTCACTATGCTTCACAAAGTTCACATAGCGTGTAAAGTTATGGCCA
                      ____________________________________________________________
consensus             ACTGTATTGTAACTCTCACTATGCTTCACAAAGTTCACATAGCGTGTAAAGTTATGGCCA
 
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rJMFF017P12+          AATTCAAAATCTGAATAACAGTATAAAGATTAAATGTCAATTATGGTTCCACGTTCAATT
                      ____________________________________________________________
consensus             AATTCAAAATCTGAATAACAGTATAAAGATTAAATGTCAATTATGGTTCCACGTTCAATT