Contig 013679:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017D24Sequence600013679 (3)ref|XP_010092891.1|1e-29UDP-galactose:fucoside alpha-3-galactosyltransferase [Morus notabilis] gb|EXB527
JMFF029D14Sequence478016292emb|CDP08739.1|5e-17unnamed protein product [Coffea canephora]730013679 (3)ref|XP_002320168.2|1e-72hypothetical protein POPTR_0014s08810g [Populus trichocarpa] gb|EEE98483.2| hypo
JMFF030C01Sequence534013679 (3)ref|XP_002511939.1|1e-47conserved hypothetical protein [Ricinus communis] gb|EEF50608.1| conserved hypot

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF029D14+ ACTCTCACGATTTGCCACNTCCAGGGAAAAAAGGCCGA
                      ____________________________________________________________
consensus ACTCTCACGATTTGCCACNTCCAGGGAAAAAAGGCCGA
 
. : . : . : . : . : . :
rJMFF029D14+ ACTTACATATGTAAGCTGCATGATTTATATGCGACCCACAGATGGAGCAAAATTAGTGAT
                      ____________________________________________________________
consensus ACTTACATATGTAAGCTGCATGATTTATATGCGACCCACAGATGGAGCAAAATTAGTGAT
 
. : . : . : . : . : . :
rJMFF030C01+ CAAAGCAAAGAAAGCTAATGA
rJMFF029D14+ GAAGAAGTGGATTGAAGAACTATCGGCTCAACCATGGTCCAAAGCAAAGAAAGCTAATGA
                      ____________________________________________________________
consensus GAAGAAGTGGATTGAAGAACTATCGGCTCAACCATGGTCCAAAGCAAAGAAAGCTAATGA
 
. : . : . : . : . : . :
rJMFF030C01+ CCAGCCTGCTTTTAACTGGGCACTAAACAAAACTGCTGGACAGGTCGACTTGTATCTGNT
rJMFF029D14+ CCAGCCTGCTTTTAACTGGGCACTAAACAAAACTGCTGGACAGGTCGACTTGTATCTGCT
rJMFF017D24+ T
                      ____________________________________________________________
consensus CCAGCCTGCTTTTAACTGGGCACTAAACAAAACTGCTGGACAGGTCGACTTGTATCTGCT
 
. : . : . : . : . : . :
rJMFF030C01+ TCCTCAAGCAGCGTTCCCAACGGGTGGTCTGTACTTCAAGAACCAANCATGGTTGCAAGA
rJMFF029D14+ TCCTCAAGCAGCGTTCCCAACGGGTGGTCTGTACTTCAAGAACCAAACATGGTTGCAAGA
rJMFF017D24+ TCCTCAAGCAGCGTTCCCAACGGGTGGTCTGTACTTCAAGAACCAAACATGGTTGCAAGA
                      ____________________________________________________________
consensus TCCTCAAGCAGCGTTCCCAACGGGTGGTCTGTACTTCAAGAACCAAACATGGTTGCAAGA
 
. : . : . : . : . : . :
rJMFF030C01+ GACCAAGGGAACGACTGTTATTATCCACAATAACTATATTACTGGTTTTGAGAAGAAGAT
rJMFF029D14+ GACCAAGGGAACGACTGTTATTATCCACAATAACTATATTACTGGTTTTGAGAAGAAGAT
rJMFF017D24+ GACCAAGGGAACGACTGTTATTATCCACAATAACTATATTACTGGTTTTGAGAAGAAGAT
                      ____________________________________________________________
consensus GACCAAGGGAACGACTGTTATTATCCACAATAACTATATTACTGGTTTTGAGAAGAAGAT
 
. : . : . : . : . : . :
rJMFF030C01+ AAAGCGTTTCCGCGAATTTGGTNTATGGTTGGTGGAAGATCATGCCTCCGAGTCCCCTCT
rJMFF029D14+ AAAGCGTTTCCGCGAATTTGGTCTATGGTTGGTGGAAGATCATGCCTCCGAGTCCCCTCT
rJMFF017D24+ AAAGCGTTTCCGCGAATTTGGTCTATGGTTGGTGGAAGATCATGCCTCCGAGTCCCCTCT
                      ____________________________________________________________
consensus AAAGCGTTTCCGCGAATTTGGTCTATGGTTGGTGGAAGATCATGCCTCCGAGTCCCCTCT
 
. : . : . : . : . : . :
rJMFF030C01+ TGGCAGATTAGACTAGATCCGATGGCCATTCCCAATCTGGACATGAAACCTCACATTGTA
rJMFF029D14+ TGGCAGATTAGACTAGATCCGATGGCCATTCCCAATCTGGACATGAAACCTCACATTGTA
rJMFF017D24+ TGGCAGATTAGACTAGATCCGATGGCCATTCCCAATCTGGACATGAAACCTCACATTGTA
                      ____________________________________________________________
consensus TGGCAGATTAGACTAGATCCGATGGCCATTCCCAATCTGGACATGAAACCTCACATTGTA
 
. : . : . : . : . : . :
rJMFF030C01+ ATCTCTTCTCGTCAAGCAAAAACACGATTTTGTGGTAAAAGATTTGTAATTCCAGCTGCA
rJMFF029D14+ ATCTCTTCTCGTCAAGCAAAAACACGATTTTGTGGTAAAAGATTTGTAATTCCAGCTGCA
rJMFF017D24+ ATCTCTTCTCGTCAAGCAAAAACACGATTTTGTGGTAAAAGATTTGTAATTCCAGCTGCA
                      ____________________________________________________________
consensus ATCTCTTCTCGTCAAGCAAAAACACGATTTTGTGGTAAAAGATTTGTAATTCCAGCTGCA
 
. : . : . : . : . : . :
rJMFF030C01+ GNTCACTTGTTGCTAGGAAACCCTTGAATTCTAGATGATTATATATAAATATATATAGTT
rJMFF029D14+ GCTCACTTGTTGCTAGGAAACCCTTGAATTCTAGATGATTATATATAAATATATATAGTT
rJMFF017D24+ GCTCACTTGTTGCTAGGAAACCCTTGAATTCTAGATGATTATATATAAATATATATAGTT
                      ____________________________________________________________
consensus GCTCACTTGTTGCTAGGAAACCCTTGAATTCTAGATGATTATATATAAATATATATAGTT
 
. : . : . : . : . : . :
rJMFF030C01+ GCAACAACAGCTCCCAGCCAGATTTGCAGCTGATGAGCTGGAATTTTCTGGCATGTAGAA
rJMFF029D14+ GCAACAACAGCTCCCAGCCAGATTTGCA-CTGATGAGCTGGAATTTTCTGGCATGTAGAA
rJMFF017D24+ GCAACAACAGCTCCCAGCCAGATTTGCA-CTGATGAGCTGGAATTTTCTGGCATGTAGAA
                      ____________________________________________________________
consensus GCAACAACAGCTCCCAGCCAGATTTGCA-CTGATGAGCTGGAATTTTCTGGCATGTAGAA
 
. : . : . : . : . : . :
rJMFF030C01+ GCTAGCGCTGTGAAGCACTCAAGCGCCTGTTAC
rJMFF029D14+ GCTAGCGCTGTGAAGCACTCAAGCGCCTGTTACTCCTTGATTTGTTGTGTATTTCTACCA
rJMFF017D24+ GCTAGCGCTGTGAAGCACTCAAGCGCCTGTTACTCCTTGATTTGTTGTGTATTTCTACCA
                      ____________________________________________________________
consensus GCTAGCGCTGTGAAGCACTCAAGCGCCTGTTACTCCTTGATTTGTTGTGTATTTCTACCA
 
. : . : . : . : . : . :
rJMFF029D14+ TCCTAAAATGTAGTTTTCAAACTGGTTCAAATA
rJMFF017D24+ TCCTAAAATGTAGTTTTCAAACTGGTTCAAATAATTTATTTAGATTTATTATTTAGAAGC
                      ____________________________________________________________
consensus TCCTAAAATGTAGTTTTCAAACTGGTTCAAATAATTTATTTAGATTTATTATTTAGAAGC
 
. : . : . : . : . : . :
rJMFF017D24+ ATTTGTTTTAAGGGTTTCCATGTAATATTTTTTTAGACGCATCAAGAGAATTGATAAGAA
                      ____________________________________________________________
consensus ATTTGTTTTAAGGGTTTCCATGTAATATTTTTTTAGACGCATCAAGAGAATTGATAAGAA