Contig 013679:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017D24Sequence600013679 (3)ref|XP_010092891.1|1e-29UDP-galactose:fucoside alpha-3-galactosyltransferase [Morus notabilis] gb|EXB527
JMFF029D14Sequence478016292emb|CDP08739.1|5e-17unnamed protein product [Coffea canephora]730013679 (3)ref|XP_002320168.2|1e-72hypothetical protein POPTR_0014s08810g [Populus trichocarpa] gb|EEE98483.2| hypo
JMFF030C01Sequence534013679 (3)ref|XP_002511939.1|1e-47conserved hypothetical protein [Ricinus communis] gb|EEF50608.1| conserved hypot

Alignment

This contig is upended


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rJMFF029D14+                                ACTCTCACGATTTGCCACNTCCAGGGAAAAAAGGCCGA
                      ____________________________________________________________
consensus                                   ACTCTCACGATTTGCCACNTCCAGGGAAAAAAGGCCGA
 
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rJMFF029D14+          ACTTACATATGTAAGCTGCATGATTTATATGCGACCCACAGATGGAGCAAAATTAGTGAT
                      ____________________________________________________________
consensus             ACTTACATATGTAAGCTGCATGATTTATATGCGACCCACAGATGGAGCAAAATTAGTGAT
 
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rJMFF030C01+                                                 CAAAGCAAAGAAAGCTAATGA
rJMFF029D14+          GAAGAAGTGGATTGAAGAACTATCGGCTCAACCATGGTCCAAAGCAAAGAAAGCTAATGA
                      ____________________________________________________________
consensus             GAAGAAGTGGATTGAAGAACTATCGGCTCAACCATGGTCCAAAGCAAAGAAAGCTAATGA
 
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rJMFF030C01+          CCAGCCTGCTTTTAACTGGGCACTAAACAAAACTGCTGGACAGGTCGACTTGTATCTGNT
rJMFF029D14+          CCAGCCTGCTTTTAACTGGGCACTAAACAAAACTGCTGGACAGGTCGACTTGTATCTGCT
rJMFF017D24+                                                                     T
                      ____________________________________________________________
consensus             CCAGCCTGCTTTTAACTGGGCACTAAACAAAACTGCTGGACAGGTCGACTTGTATCTGCT
 
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rJMFF030C01+          TCCTCAAGCAGCGTTCCCAACGGGTGGTCTGTACTTCAAGAACCAANCATGGTTGCAAGA
rJMFF029D14+          TCCTCAAGCAGCGTTCCCAACGGGTGGTCTGTACTTCAAGAACCAAACATGGTTGCAAGA
rJMFF017D24+          TCCTCAAGCAGCGTTCCCAACGGGTGGTCTGTACTTCAAGAACCAAACATGGTTGCAAGA
                      ____________________________________________________________
consensus             TCCTCAAGCAGCGTTCCCAACGGGTGGTCTGTACTTCAAGAACCAAACATGGTTGCAAGA
 
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rJMFF030C01+          GACCAAGGGAACGACTGTTATTATCCACAATAACTATATTACTGGTTTTGAGAAGAAGAT
rJMFF029D14+          GACCAAGGGAACGACTGTTATTATCCACAATAACTATATTACTGGTTTTGAGAAGAAGAT
rJMFF017D24+          GACCAAGGGAACGACTGTTATTATCCACAATAACTATATTACTGGTTTTGAGAAGAAGAT
                      ____________________________________________________________
consensus             GACCAAGGGAACGACTGTTATTATCCACAATAACTATATTACTGGTTTTGAGAAGAAGAT
 
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rJMFF030C01+          AAAGCGTTTCCGCGAATTTGGTNTATGGTTGGTGGAAGATCATGCCTCCGAGTCCCCTCT
rJMFF029D14+          AAAGCGTTTCCGCGAATTTGGTCTATGGTTGGTGGAAGATCATGCCTCCGAGTCCCCTCT
rJMFF017D24+          AAAGCGTTTCCGCGAATTTGGTCTATGGTTGGTGGAAGATCATGCCTCCGAGTCCCCTCT
                      ____________________________________________________________
consensus             AAAGCGTTTCCGCGAATTTGGTCTATGGTTGGTGGAAGATCATGCCTCCGAGTCCCCTCT
 
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rJMFF030C01+          TGGCAGATTAGACTAGATCCGATGGCCATTCCCAATCTGGACATGAAACCTCACATTGTA
rJMFF029D14+          TGGCAGATTAGACTAGATCCGATGGCCATTCCCAATCTGGACATGAAACCTCACATTGTA
rJMFF017D24+          TGGCAGATTAGACTAGATCCGATGGCCATTCCCAATCTGGACATGAAACCTCACATTGTA
                      ____________________________________________________________
consensus             TGGCAGATTAGACTAGATCCGATGGCCATTCCCAATCTGGACATGAAACCTCACATTGTA
 
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rJMFF030C01+          ATCTCTTCTCGTCAAGCAAAAACACGATTTTGTGGTAAAAGATTTGTAATTCCAGCTGCA
rJMFF029D14+          ATCTCTTCTCGTCAAGCAAAAACACGATTTTGTGGTAAAAGATTTGTAATTCCAGCTGCA
rJMFF017D24+          ATCTCTTCTCGTCAAGCAAAAACACGATTTTGTGGTAAAAGATTTGTAATTCCAGCTGCA
                      ____________________________________________________________
consensus             ATCTCTTCTCGTCAAGCAAAAACACGATTTTGTGGTAAAAGATTTGTAATTCCAGCTGCA
 
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rJMFF030C01+          GNTCACTTGTTGCTAGGAAACCCTTGAATTCTAGATGATTATATATAAATATATATAGTT
rJMFF029D14+          GCTCACTTGTTGCTAGGAAACCCTTGAATTCTAGATGATTATATATAAATATATATAGTT
rJMFF017D24+          GCTCACTTGTTGCTAGGAAACCCTTGAATTCTAGATGATTATATATAAATATATATAGTT
                      ____________________________________________________________
consensus             GCTCACTTGTTGCTAGGAAACCCTTGAATTCTAGATGATTATATATAAATATATATAGTT
 
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rJMFF030C01+          GCAACAACAGCTCCCAGCCAGATTTGCAGCTGATGAGCTGGAATTTTCTGGCATGTAGAA
rJMFF029D14+          GCAACAACAGCTCCCAGCCAGATTTGCA-CTGATGAGCTGGAATTTTCTGGCATGTAGAA
rJMFF017D24+          GCAACAACAGCTCCCAGCCAGATTTGCA-CTGATGAGCTGGAATTTTCTGGCATGTAGAA
                      ____________________________________________________________
consensus             GCAACAACAGCTCCCAGCCAGATTTGCA-CTGATGAGCTGGAATTTTCTGGCATGTAGAA
 
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rJMFF030C01+          GCTAGCGCTGTGAAGCACTCAAGCGCCTGTTAC                           
rJMFF029D14+          GCTAGCGCTGTGAAGCACTCAAGCGCCTGTTACTCCTTGATTTGTTGTGTATTTCTACCA
rJMFF017D24+          GCTAGCGCTGTGAAGCACTCAAGCGCCTGTTACTCCTTGATTTGTTGTGTATTTCTACCA
                      ____________________________________________________________
consensus             GCTAGCGCTGTGAAGCACTCAAGCGCCTGTTACTCCTTGATTTGTTGTGTATTTCTACCA
 
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rJMFF029D14+          TCCTAAAATGTAGTTTTCAAACTGGTTCAAATA                           
rJMFF017D24+          TCCTAAAATGTAGTTTTCAAACTGGTTCAAATAATTTATTTAGATTTATTATTTAGAAGC
                      ____________________________________________________________
consensus             TCCTAAAATGTAGTTTTCAAACTGGTTCAAATAATTTATTTAGATTTATTATTTAGAAGC
 
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rJMFF017D24+          ATTTGTTTTAAGGGTTTCCATGTAATATTTTTTTAGACGCATCAAGAGAATTGATAAGAA
                      ____________________________________________________________
consensus             ATTTGTTTTAAGGGTTTCCATGTAATATTTTTTTAGACGCATCAAGAGAATTGATAAGAA