Contig 013677:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF016F04-                                        ATCTATTCCTATACCTATAACTATAATTTCC
                      ____________________________________________________________
consensus                                          ATCTATTCCTATACCTATAACTATAATTTCC
 
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JMFF016F04-           CCGCACTCCGTCGCTCTACCCAGAGCGATCTCAGACAACAGAAGCCATTAGAAGCGAACG
JMFF031L11-                            ACCCTGAGCGATCTCAGACAACAGAAGCCATTAGAAGCGAACG
                      ____________________________________________________________
consensus             CCGCACTCCGTCGCTCTACCCTGAGCGATCTCAGACAACAGAAGCCATTAGAAGCGAACG
 
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JMFF016F04-           CCACTGCTTTTGACGATGGCCATAATCGCCGAATCGTCAGATGAGAATTCAAAAGCGCCG
JMFF031L11-           CCACTGCTTTTGACGATGGCCATAATCGCCGAATCGTCAGATGAGAATTCAAAAGCGCCG
                      ____________________________________________________________
consensus             CCACTGCTTTTGACGATGGCCATAATCGCCGAATCGTCAGATGAGAATTCAAAAGCGCCG
 
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JMFF016F04-           CCGTCCCCCGTCGCCCCGTCACTCCCTCGACAGCGAGGAAACTACTCAGACAATTTGGAA
JMFF031L11-           CCGTCCCCCGTCGCCCCGTCACTCCCTCGACAGCGAGGAAACTACTCAGACAATTTGGAA
                      ____________________________________________________________
consensus             CCGTCCCCCGTCGCCCCGTCACTCCCTCGACAGCGAGGAAACTACTCAGACAATTTGGAA
 
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JMFF016F04-           ACCCTAGCACAGGCTGCACCGTGGATTGACGATGCTCTGCAACAGGCGCGGCAGGCCCAG
JMFF031L11-           ACCCTAGCACAGGCTGCACCGTGGATTGACGATGCTCTGCAACAGGCGCGGCAGGCCCAG
                      ____________________________________________________________
consensus             ACCCTAGCACAGGCTGCACCGTGGATTGACGATGCTCTGCAACAGGCGCGGCAGGCCCAG
 
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JMFF016F04-           CAGACTGTAGAAACTGTAATAGAGAGTGCAATCACCGTAACCAAATCTCGATTGGATCGT
JMFF031L11-           CAGACTGTAGAAACTGTAATAGAGAGTGCAATCACCGTAACCAAATCTCGATTGGATCGT
                      ____________________________________________________________
consensus             CAGACTGTAGAAACTGTAATAGAGAGTGCAATCACCGTAACCAAATCTCGATTGGATCGT
 
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JMFF016F04-           ATCCTGACCACATCGTCTGCTCATTTTAATCAAACTCTTGATTCCTTGCAAGATGTTAAG
JMFF031L11-           ATCCTGACCACATCGTCTGCTCATTTTAATCAAACTCTTGATTCCTTGCAAGATGTTAAG
                      ____________________________________________________________
consensus             ATCCTGACCACATCGTCTGCTCATTTTAATCAAACTCTTGATTCCTTGCAAGATGTTAAG
 
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JMFF016F04-           GCTGAATATCATTTATATGAGGACTTAACTTTTGGGAGGATGGAAGAGGGTATTTGTATT
JMFF031L11-           GCTGAATATCATTTATATGAGGACTTAACTTTTGGGAGGATGAAAGAGGGTATTTGTATT
                      ____________________________________________________________
consensus             GCTGAATATCATTTATATGAGGACTTAACTTTTGGGAGGATGGAAGAGGGTATTTGTATT
 
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JMFF016F04-           GCAGCTTCACATCCTCTGATCACAACAGGAGCTTTTCTTAGCCTTGGATTCTTGGGTCTG
JMFF031L11-           GCAGCTTCACATC--CTGATCACAACAGGAGCTTTTCTTAGCCTTGGATTCTTGGGTCTG
                      ____________________________________________________________
consensus             GCAGCTTCACATCCTCTGATCACAACAGGAGCTTTTCTTAGCCTTGGATTCTTGGGTCTG
 
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JMFF016F04-           AAAAG                                                       
JMFF031L11-           AAAAGACCAAGGCGATTTTTGTACTACAAAGCAAGAAGCATATTTGTCAGTGAAGAGGCC
rJMFF031L11+                                                                   GCC
rJMFF016F04+                                                                   GCC
                      ____________________________________________________________
consensus             AAAAGACCAAGGCGATTTTTGTACTACAAAGCAAGAAGCATATTTGTCAGTGAAGAGGCC
 
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JMFF031L11-           ATGCTTTCTAAGGCTGATGCAAAAGTCAAAGAGCTGAAGAAATCCATTGATTTTCTGAAG
rJMFF031L11+          ATGCTTTCTAAGGCTGATGCAAAAGTCAAAGAGCTGAAGAAATCCATTGATTTTCTGAAG
rJMFF016F04+          ATGCTTTCTAAGGCTGATGCAAAAGTCAAAGAGCTGAAGAAATCCATTGATTTTCTGAAG
                      ____________________________________________________________
consensus             ATGCTTTCTAAGGCTGATGCAAAAGTCAAAGAGCTGAAGAAATCCATTGATTTTCTGAAG
 
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JMFF031L11-           GCAGAGAGTGAGAAATGGGAGAAGAACGCAGTGCAAGCTGAACAGGAGCTGATAC     
rJMFF031L11+          GCAGAGAGTGAGAAATGGGAGAAGAACGCAGTGCAAGCTGAACAGGAGCTGATACGGGGA
rJMFF016F04+          GCAGAGAGTGAGAAATGGGAGAAGAACGCAGTGCAAGCTGAACAGGAGCTGATACGGGGA
                      ____________________________________________________________
consensus             GCAGAGAGTGAGAAATGGGAGAAGAACGCAGTGCAAGCTGAACAGGAGCTGATACGGGGA
 
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rJMFF031L11+          AAGACAAAATTGAGACAAGCTGGGAAACAAATTAGGAGTGTTATTCGCTCTGCCTATAAG
rJMFF016F04+          AAGACAAAATTGAGACAAGCTGGGAAACAAATTAGGAGTGTTATTCGCTCTGCCTATAAG
                      ____________________________________________________________
consensus             AAGACAAAATTGAGACAAGCTGGGAAACAAATTAGGAGTGTTATTCGCTCTGCCTATAAG
 
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rJMFF031L11+          ATAGAAAGACAAGCTGCAGGTCTGAAAGATGTCCTCAAAGAGCTTCCACGAAGAGAAGCT
rJMFF016F04+          ATAGAAAGACAAGCTGCAGGTCTGAAAGATGTCCTCAAAGAGCTTCCACGAAGAGAAGCT
                      ____________________________________________________________
consensus             ATAGAAAGACAAGCTGCAGGTCTGAAAGATGTCCTCAAAGAGCTTCCACGAAGAGAAGCT
 
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rJMFF031L11+          TCTTTGTTTAGATCACAAGTTTCCAACCTTGCTTCAGAGGCAAAGAAAGAAAGGAATTTT
rJMFF016F04+          TCTTTGTTTAGATCACAAGTTTCCAACCTTGCTTCAGAGGCAAAGAAAGAAAGGAATTTT
                      ____________________________________________________________
consensus             TCTTTGTTTAGATCACAAGTTTCCAACCTTGCTTCAGAGGCAAAGAAAGAAAGGAATTTT
 
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rJMFF031L11+          CTTACTAAGGAGGTTACAAAAATAAGCAATCATGGCATCTCGGTCTGATTCAACCATTCT
rJMFF016F04+          CTTACTAAGGAGGTTACAAAAATAAGCAATCATGGCATCTCGGTCTGATTCAACCATTCT
                      ____________________________________________________________
consensus             CTTACTAAGGAGGTTACAAAAATAAGCAATCATGGCATCTCGGTCTGATTCAACCATTCT
 
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rJMFF031L11+          CTATCCACATACTCTCTCTAGTAGTAGTAGTTTGACAGATGGATAATTGTATAAACTGTT
rJMFF016F04+          CTATCCACATACTCTCTCTAGTAGTAGTAGTTTGACAGATGGATAATTGTATAAACTGTT
                      ____________________________________________________________
consensus             CTATCCACATACTCTCTCTAGTAGTAGTAGTTTGACAGATGGATAATTGTATAAACTGTT
 
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rJMFF031L11+          CCACCCAAATAAAAGCAATATTTAGGAGTTGTGATTATGAATTTACCATGAGGGAGGGGA
rJMFF016F04+          CCACCCAAATAAAAGCAATATTTAGGAGTTGTGATTATGAATTTACCATGAGGGAGGGGA
                      ____________________________________________________________
consensus             CCACCCAAATAAAAGCAATATTTAGGAGTTGTGATTATGAATTTACCATGAGGGAGGGGA
 
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rJMFF031L11+          GAGGGGGGCTTCATCCCACAGGAGAACAAGTTTTTCTTACAACTCTCAGTCAGGCCAGAT
rJMFF016F04+          GAGGGGGGCTTCATCCCACAGGAGAACAAGTTTTTCTTACAACTCTCAGTCAGGCCAGAT
                      ____________________________________________________________
consensus             GAGGGGGGCTTCATCCCACAGGAGAACAAGTTTTTCTTACAACTCTCAGTCAGGCCAGAT
 
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rJMFF031L11+          GGAAGTATTGGCCTTTTTAGTGATGGTGAAATGTTCAGTCAGGCCAGATGAAATGCTCAG
rJMFF016F04+          GGAAGTATTGGCCTTTTTAGTGATGGTGAAATGTTCAGTCAGGCCAGATGAAATGCTCAG
                      ____________________________________________________________
consensus             GGAAGTATTGGCCTTTTTAGTGATGGTGAAATGTTCAGTCAGGCCAGATGAAATGCTCAG
 
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rJMFF031L11+          TATCAGAATGCCGTATAATATGGCACTTTAATTACTTGAAATTATTTTGAGGCAAGGCTT
rJMFF016F04+          TATCAGAATGCCGTATAATATGGCACTTTAATTACTTGAAATTATTTTGAGGCAAGGCTT
                      ____________________________________________________________
consensus             TATCAGAATGCCGTATAATATGGCACTTTAATTACTTGAAATTATTTTGAGGCAAGGCTT
 
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rJMFF031L11+          CATATGTTTATCTTTTGACCTTATTTTGTACGTTTTTATCATGACCAACGATTGGAGA  
rJMFF016F04+          CATATGTTTATCTTTTGACCTTATTTTGTACGTTTTTATCATGACCAACGATTGGAGAGA
                      ____________________________________________________________
consensus             CATATGTTTATCTTTTGACCTTATTTTGTACGTTTTTATCATGACCAACGATTGGAGAGA