| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012C16 | Sequence | 507 | 008755 (6) | ref|XP_010253592.1| | 7e-25 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.1 [Nelumbo nuci | 732 | 013675 (5) | ref|XP_009598151.1| | 3e-102 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.1-like [Nicotia |
| JMFF016C16 | Sequence | 584 | 013675 (5) | ref|XP_009598151.1| | 4e-96 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.1-like [Nicotia | 743 | 013675 (5) | ref|XP_009598151.1| | 2e-96 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.1-like [Nicotia |
| JMFF042D18 | Sequence | 633 | 008755 (6) | ref|XP_009601141.1| | 1e-69 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.1-like [Nicotia | 577 | 013675 (5) | ref|XP_009598151.1| | 5e-71 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.1-like [Nicotia |
| JMSF005P21 | Sequence | 283 | 008755 (6) | 111 | 013675 (5) | ref|XP_009598151.1| | 6e-17 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.1-like [Nicotia | |||
This contig is upended
. : . : . : . : . : . :
JMFF016C16- GGCTCGCCAG
rJMFF012C16+ TTCAACGCAAGATTAAGCGATTTCGGGCTCGCCAG
rJMFF016C16+ CGGGCTCGCCAG
____________________________________________________________
consensus TTCAACGCAAGATTAAGCGATTTCGGGCTCGCCAG
. : . : . : . : . : . :
JMFF016C16- GCAAGTGGAGCACGACAAGTCCCCGGACGCCACCGTGGCGGCCGGAACAATGGGGTACCT
rJMFF012C16+ GCAAGTGGAGCACGACAAGTCCCCGGACGCCACCGTGGCGGCCGGAACAATGGGGTACCT
rJMFF016C16+ GCAAGTGGAGCACGACAAGTCCCCGGACGCCACCGTGGCGGCCGGAACAATGGGGTACCT
____________________________________________________________
consensus GCAAGTGGAGCACGACAAGTCCCCGGACGCCACCGTGGCGGCCGGAACAATGGGGTACCT
. : . : . : . : . : . :
JMFF016C16- CGCGCCGGAATATCTCCTAACCGGCCGCGCCACGGATAAAACAGACGTGTTCAGCTACGG
rJMFF042D18+ CGGATAAAACAGACGTGTTCAGCTACGG
rJMFF012C16+ CGCGCCGGAATATCTCCTAACCGGCCGCGCCACGGATAAAACAGACGTGTTCAGCTACGG
rJMFF016C16+ CGCGCCGGAATATCTCCTAACCGGCCGCGCCACGGATAAAACAGACGTGTTCAGCTACGG
____________________________________________________________
consensus CGCGCCGGAATATCTCCTAACCGGCCGCGCCACGGATAAAACAGACGTGTTCAGCTACGG
. : . : . : . : . : . :
JMFF016C16- CGCGGTGGTTCTTGAAGTCGCCAGCGGGAGGAGGCCGATAGAGAAGGAAGCGGAGAAGGC
rJMFF042D18+ CGCGGTGGTTCTTGAAGTCGCCAGCGGGAGGAGGCCGATAGAGAAGGAAGCGGAGAAGGC
rJMFF012C16+ CGCGGTGGTTCTTGAAGTCGCCAGCGGGAGGAGGCCGATAGAGAAGGAAGCGGAGAAGGC
rJMFF016C16+ CGCGGTGGTTCTTGAAGTCGCCAGCGGGAGGAGGCCGATAGAGAAGGAAGCGGAGAAGGC
____________________________________________________________
consensus CGCGGTGGTTCTTGAAGTCGCCAGCGGGAGGAGGCCGATAGAGAAGGAAGCGGAGAAGGC
. : . : . : . : . : . :
JMFF016C16- GAGAGGGGGGAATGGGAACTTGGTGGAATGGGTATGGAGTTTGCACCGAGAAGGGAGATT
rJMFF042D18+ GAGAGGGGGGAATGGGAACTTGGTGGAATGGGTATGGAGTTTGCACCGAGAAGGGAGATT
rJMFF012C16+ GAGAGGGGGGAATGGGAACTTGGTGGAATGGGTATGGAGTTTGCACCGAGAAGGGAGATT
rJMFF016C16+ GAGAGGGGGGAATGGGAACTTGGTGGAATGGGTATGGAGTTTGCACCGAGAAGGGAGATT
____________________________________________________________
consensus GAGAGGGGGGAATGGGAACTTGGTGGAATGGGTATGGAGTTTGCACCGAGAAGGGAGATT
. : . : . : . : . : . :
JMFF016C16- GCTTTCGGCGGCAGATTCGCGGCTGAATGGGGAGTTTGAGGAAGGAGAAATGAGGAGAGT
rJMFF042D18+ GCTTTCGGCGGCAGATTCGCGGCTGAATGGGGAGTTTGAGGAAGGAGAAATGAGGAGAGT
rJMFF012C16+ GCTTTCGGCGGCAGATTCGCGGCTGAATGGGGAGTTTGAGGAAGGAGAAATGAGGAGAGT
rJMFF016C16+ GCTTTCGGCGGCAGATTCGCGGCTGAATGGGGAGTTTGAGGAAGGAGAAATGAGGAGAGT
____________________________________________________________
consensus GCTTTCGGCGGCAGATTCGCGGCTGAATGGGGAGTTTGAGGAAGGAGAAATGAGGAGAGT
. : . : . : . : . : . :
rJMSF005P21+ TGCTCGCACCCGGACCCCATGGCTAGACCTTCCATGAGAGG
JMFF016C16- TCTTCTGGTTGGGTTAGCTTGCTCGCACCCGGACCCCATGGCTAGACCTTCCATGAGAGG
rJMFF042D18+ TCTTCTGGTTGGGTTAGCTTGCTCGCACCCGGACCCCATGGCTAGACCTTCCATGAGAGG
rJMFF012C16+ TCTTCTGGTTGGGTTAGCTTGCTCGCACCCGGACCCCATGGCTAGACCTTCCATGAGAGG
rJMFF016C16+ TCTTCTGGTTGGGTTAGCTTGCTCGCACCCGGACCCCATGGCTAGACCTTCCATGAGAGG
____________________________________________________________
consensus TCTTCTGGTTGGGTTAGCTTGCTCGCACCCGGACCCCATGGCTAGACCTTCCATGAGAGG
. : . : . : . : . : . :
rJMSF005P21+ AGTGGTGCAGATGCTGGTGGGGGAAGCGGAGGTGCCATTGGTGCCCAGAGCTAAACCTTC
JMFF016C16- AGTGGTGCAGATGCTGGTGGGGGAAGCGGAGGTGCCATTGGTGCCCAGAGCTAAACCTTC
rJMFF042D18+ AGTGGTGCAGATGCTGGTGGGGGAAGCGGAGGTGCCATTGGTGCCCAGAGCTAAACCTTC
rJMFF012C16+ AGTGGTGCAGATGCTGGTGGGGGAAGCGGAGGTGCCATTGGTGCCCAGAGCTAAACCTTC
rJMFF016C16+ AGTGGTGCAGATGCTGGTGGGGGAAGCGGAGGTGCCATTGGTGCCCAGAGCTAAACCTTC
____________________________________________________________
consensus AGTGGTGCAGATGCTGGTGGGGGAAGCGGAGGTGCCATTGGTGCCCAGAGCTAAACCTTC
. : . : . : . : . : . :
rJMSF005P21+ CATGAATTTC
JMFF016C16- CATGAATTTCACCACTTCGCACCTTCTCATGACGCTGCAGGATAGTGTTTCTGACTTGAA
rJMFF042D18+ CATGAATTTCACCACTTCGCACCTTCTCATGACGCTGCAGGATAGTGTTTCTGACTTGAA
rJMFF012C16+ CATGAATTTCACCACTTCGCACCTTCTCATGACGCTGCAGGATAGTGTTTCTGACTTGAA
rJMFF016C16+ CATGAATTTCACCACTTCGCACCTTCTCATGACGCTGCAGGATAGTGTTTCTGACTTGAA
____________________________________________________________
consensus CATGAATTTCACCACTTCGCACCTTCTCATGACGCTGCAGGATAGTGTTTCTGACTTGAA
. : . : . : . : . : . :
JMFF016C16- TGAAATCATCGCCTTCTCCCCATCGTCCTCTCAGAGCAGCTTCACTGGAATGGATATAGN
rJMFF042D18+ TGAAATCATCGCCTTCTCCCCATCGTCCTCTCAGAGCAGCTTCACTGGAATGGATATAGT
rJMFF012C16+ TGAAATCATCGCCTTCTCCCCATCGTCCTCTCAGAGCAGCTTCACTGGAATGGATATAGT
rJMFF016C16+ TGAAATCATCGCCTTCTCCCCATCGTCCTCTCAGAGCAGCTTCACTGGAATGGATATAGT
____________________________________________________________
consensus TGAAATCATCGCCTTCTCCCCATCGTCCTCTCAGAGCAGCTTCACTGGAATGGATATAGT
. : . : . : . : . : . :
JMFF016C16- CTAATTATTATTATTATTATTATTATTATTATTA
rJMFF042D18+ CTAATTATTATTATTATTATTATTATTATTATTAACCCAGAAAGCCTGCAGGGGAGAAGG
rJMFF012C16+ CTAATTATTATTATTATTATTATTATTATTATTAACCCAGAAAGCCTGCAGGGGAGAAGG
rJMFF016C16+ CTAATTATTATTATTATTATTATTATTATTATTAACCCAGAAAGCCTGCAGGGGAGAAGG
____________________________________________________________
consensus CTAATTATTATTATTATTATTATTATTATTATTAACCCAGAAAGCCTGCAGGGGAGAAGG
. : . : . : . : . : . :
rJMFF042D18+ AAGAAATTAAACCCATCTTTTTGTTCATATTATTCATTAATTTATTATCATCATCATTGT
rJMFF012C16+ AAGAAATTAAACCCATCTTTTTGTTCATATTATTCATTAATTTATTATCATCATCATTGT
rJMFF016C16+ AAGAAATTAAACCCATCTTTTTGTTCATATTATTCATTAATTTATTATCATCATCATTGT
____________________________________________________________
consensus AAGAAATTAAACCCATCTTTTTGTTCATATTATTCATTAATTTATTATCATCATCATTGT
. : . : . : . : . : . :
rJMFF042D18+ TGTTGTTG
rJMFF012C16+ TGTTGTTGTATGTAAAGTGTAAAACAAGACAATAACA
rJMFF016C16+ TGTTGTTGTATGTAAAGTGTAAAACAAGACAATAACATTAATCTTCATGCCCAGAGAAAA
____________________________________________________________
consensus TGTTGTTGTATGTAAAGTGTAAAACAAGACAATAACATTAATCTTCATGCCCAGAGAAAA