Contig 013672:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015I03Sequence601003157 (2)ref|XP_009768995.1|3e-42PREDICTED: BES1/BZR1 homolog protein 4-like [Nicotiana sylvestris]733013672 (2)ref|XP_010644097.1|1e-64PREDICTED: BES1/BZR1 homolog protein 4 [Vitis vinifera]
JMFF021D14Sequence606003157 (2)ref|XP_009768995.1|4e-44PREDICTED: BES1/BZR1 homolog protein 4-like [Nicotiana sylvestris]721013672 (2)ref|XP_010644097.1|8e-71PREDICTED: BES1/BZR1 homolog protein 4 [Vitis vinifera]

Alignment

This contig is upended


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rJMFF021D14+                                                        AGCTCCCCAACTGG
rJMFF015I03+                                                         GCTCCCCAACTGG
                      ____________________________________________________________
consensus                                                           AGCTCCCCAACTGG
 
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rJMFF021D14+          CAGGACCCCCAGAAT-AAGAACTGATTGGAATGGCCCTTCTGCCTGTGTTGGCTGGGGTG
rJMFF015I03+          CAGGACCCCCAGAATAAAGAACTGATTGGAATGGCCCTTCTGCCTGTGTTGGCTGGGGTG
                      ____________________________________________________________
consensus             CAGGACCCCCAGAATAAAGAACTGATTGGAATGGCCCTTCTGCCTGTGTTGGCTGGGGTG
 
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rJMFF021D14+          GACCACACTACTCTTTCCTTCCTTCATCGACACCTGTAAGCCCTAGCCGCCAGACCCATC
rJMFF015I03+          GACCACACTACTCTTTCCTTCCTTCATCGACACCTGTAAGCCCTAGCCGCCAGACCCATC
                      ____________________________________________________________
consensus             GACCACACTACTCTTTCCTTCCTTCATCGACACCTGTAAGCCCTAGCCGCCAGACCCATC
 
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rJMFF021D14+          CTCCTCATTCAGAATGGCTTGCTGGGATACAAATCCCACATGGTGGGGCAACTTCTCCAA
rJMFF015I03+          CTCCTCATTCAGAATGGCTTGCTGGGATACAAATCCCACATGGTGGGGCAACTTCTCCAA
                      ____________________________________________________________
consensus             CTCCTCATTCAGAATGGCTTGCTGGGATACAAATCCCACATGGTGGGGCAACTTCTCCAA
 
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rJMFF021D14+          CTTATAGTCTTGTCTCTCCCAATCCACTCGGCTTTAAAGCCCAGACTCTGCCCCATCATC
rJMFF015I03+          CTTATAGTCTTGTCTCTCCCAATCCACTCGGCTTTAAAGCCCAGACTCTGCCCCATCATC
                      ____________________________________________________________
consensus             CTTATAGTCTTGTCTCTCCCAATCCACTCGGCTTTAAAGCCCAGACTCTGCCCCATCATC
 
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rJMFF021D14+          GCGGATCTCTCATTTCCACTCCTGGACAGAGTGGGACATGTTCACCTGCTATTGCCGCAG
rJMFF015I03+          GCGGATCTCTCATTTCCACTCCTGGACAGAGTGGGACATGTTCACCTGCTATTGCCGCAG
                      ____________________________________________________________
consensus             GCGGATCTCTCATTTCCACTCCTGGACAGAGTGGGACATGTTCACCTGCTATTGCCGCAG
 
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rJMFF021D14+          GCTTTGATCACACTGCTGACGTTCCAATGGCTGAAGCTGTCTCAGACGAATTTGCATTTG
rJMFF015I03+          GCTTTGATCACACTGCTGACGTTCCAATGGCTGAAGCTGTCTCAGACGAATTTGCATTTG
                      ____________________________________________________________
consensus             GCTTTGATCACACTGCTGACGTTCCAATGGCTGAAGCTGTCTCAGACGAATTTGCATTTG
 
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rJMFF021D14+          GGAGCAACACAGCAGGCTTTGTGAAGCCCTGGGAAGGGGAGAGGATTCACGAGGAGTGTG
rJMFF015I03+          GGAGCAACACAGCAGGCTTTGTGAAGCCCTGGGAAGGGGAGAGGATTCACGAGGAGTGTG
                      ____________________________________________________________
consensus             GGAGCAACACAGCAGGCTTTGTGAAGCCCTGGGAAGGGGAGAGGATTCACGAGGAGTGTG
 
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rJMFF021D14+          GTCCTGATGACCTCGAGCTCACTCTCGGGAGCTCTAAGACCAGGTGAAGATTGAGAATGG
rJMFF015I03+          GTCCTGATGACCTCGAGCTCACTCTCGGGAGCTCTAAGACCAGGTGAAGATTGAGAATGG
                      ____________________________________________________________
consensus             GTCCTGATGACCTCGAGCTCACTCTCGGGAGCTCTAAGACCAGGTGAAGATTGAGAATGG
 
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rJMFF021D14+          AACAAAAACACAAGTTGTGTGGATGTGATAACTGAATTAAAGACAAGATGTTGAGACAAG
rJMFF015I03+          AACAAAAACACAAGTTGTGTGGATGTGATAACTGAATTAAAGACAAGATGTTGAGACAAG
                      ____________________________________________________________
consensus             AACAAAAACACAAGTTGTGTGGATGTGATAACTGAATTAAAGACAAGATGTTGAGACAAG
 
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rJMFF021D14+          AAAGACATCACCTGGATGAACATGCGGCTGTCTAAGCTGCTATCCAACATGTTTCATGGT
rJMFF015I03+          AAAGACATCACCTGGATGAACATGCGGCTGTCTAAGCTGCTATCCAACATGTTTCATGGT
                      ____________________________________________________________
consensus             AAAGACATCACCTGGATGAACATGCGGCTGTCTAAGCTGCTATCCAACATGTTTCATGGT
 
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rJMFF021D14+          TTGTTGTATTCGTATGTTCTTCCTAAGTCTACCCACCCCTCCACCTCCAGACATTTTCTT
rJMFF015I03+          TTGTTGTATTCGTATGTTCTTCCTAAGTCTACCCACCCCTCCACCTCCAGACATTTTCTT
                      ____________________________________________________________
consensus             TTGTTGTATTCGTATGTTCTTCCTAAGTCTACCCACCCCTCCACCTCCAGACATTTTCTT
 
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rJMFF021D14+          TCTTGCATTATTATGTAAATTTC-TTCAGGTTGCACTCATTTAACTATA           
rJMFF015I03+          TCTTGCATTATTATGTAAATTTCTTTCAGGTTGCACTCATTTAACTATATATTACGGAGT
                      ____________________________________________________________
consensus             TCTTGCATTATTATGTAAATTTCTTTCAGGTTGCACTCATTTAACTATATATTACGGAGT