Contig 013671:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015H08Sequence609013671 (2)ref|XP_009760270.1|97.4PREDICTED: uncharacterized protein LOC104212640 [Nicotiana sylvestris]682013671 (2)ref|XP_009760270.1|160PREDICTED: uncharacterized protein LOC104212640 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF015H08-                                GTACCCTCCTCCTCATTACCCTTAGACTCGGCTACCGAT
                      ____________________________________________________________
consensus                                  GTACCCTCCTCCTCATTACCCTTAGACTCGGCTACCGAT
 
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JMFF015H08-           TCCAATAACTCAGTCGAGTCGGTTACCGGTTCTGTTTTCACTACCTCATGAACCGGTTCC
                      ____________________________________________________________
consensus             TCCAATAACTCAGTCGAGTCGGTTACCGGTTCTGTTTTCACTACCTCATGAACCGGTTCC
 
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JMFF015H08-           TTTTCCACGCTGTTAGAGCTACAGTTACATGAATCCTCTCGACCCGGTTTTCCCTCTTTT
                      ____________________________________________________________
consensus             TTTTCCACGCTGTTAGAGCTACAGTTACATGAATCCTCTCGACCCGGTTTTCCCTCTTTT
 
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JMFF015H08-           ACTTTATCCGGTTCGTCTTCTACGTTTCCGGTTTGTATAGCTTCCAAGTGTTTCCCGTCG
                      ____________________________________________________________
consensus             ACTTTATCCGGTTCGTCTTCTACGTTTCCGGTTTGTATAGCTTCCAAGTGTTTCCCGTCG
 
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JMFF015H08-           TCTTTTGTACCGGTTCGTGCATTTGCGTCTTTCTGATCCGTGGAATTCGATTCATTCATG
                      ____________________________________________________________
consensus             TCTTTTGTACCGGTTCGTGCATTTGCGTCTTTCTGATCCGTGGAATTCGATTCATTCATG
 
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JMFF015H08-           GACTGTTGGTCCTTATCGCCGGTTACTGGTTCTCCGGCGTCCGATTCCGGGGTAATCTCA
                      ____________________________________________________________
consensus             GACTGTTGGTCCTTATCGCCGGTTACTGGTTCTCCGGCGTCCGATTCCGGGGTAATCTCA
 
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JMFF015H08-           ACGCCGCCTTCATTTTTCTCCACACAACGGATTTCCTGATTCTCACTCATCGCCGGATCT
                      ____________________________________________________________
consensus             ACGCCGCCTTCATTTTTCTCCACACAACGGATTTCCTGATTCTCACTCATCGCCGGATCT
 
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JMFF015H08-           GATTTCTCATCCTCTCGCAGACTCCGATCTCTCTCTTCCGTCAGTGTCTTCACCTTCAAT
                      ____________________________________________________________
consensus             GATTTCTCATCCTCTCGCAGACTCCGATCTCTCTCTTCCGTCAGTGTCTTCACCTTCAAT
 
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JMFF015H08-           TGCAGAGACCTAGATCACAATCAAAGAAATCTCTCATTTTCCAGCAAAAATTGCTGATAA
rJMFF015H08+                                                TTCCAGCAAAAATTGCTGATAA
                      ____________________________________________________________
consensus             TGCAGAGACCTAGATCACAATCAAAGAAATCTCTCATTTTCCAGCAAAAATTGCTGATAA
 
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JMFF015H08-           AACCAAGCTATCATCATTCAGATCTTCAAATTTTATGTATATATAGGAACATGCGAATTA
rJMFF015H08+          AACCAAGCTATCATCATTCAGATCTTCAAATTTTATGTATATATAGGAACATGCGAATTA
                      ____________________________________________________________
consensus             AACCAAGCTATCATCATTCAGATCTTCAAATTTTATGTATATATAGGAACATGCGAATTA
 
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JMFF015H08-           CACGATAGAGAGATCATAGCGCTCAACTTC                              
rJMFF015H08+          CACGATAGAGAGATCATAGCGCTCAACTTCGCGTGTCAGTTCAGCGACTCGGAGCTTCCG
                      ____________________________________________________________
consensus             CACGATAGAGAGATCATAGCGCTCAACTTCGCGTGTCAGTTCAGCGACTCGGAGCTTCCG
 
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rJMFF015H08+          CAACTCCTCCAGCAAAGGTACGGCAGTCTCGGTTCGTTCGCCACACTCATCGTCAACACC
                      ____________________________________________________________
consensus             CAACTCCTCCAGCAAAGGTACGGCAGTCTCGGTTCGTTCGCCACACTCATCGTCAACACC
 
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rJMFF015H08+          GTTAACTTCACCAGAAGAGAAACGTCTCTTGAGGTCAAGGTATTTAAGTCTACAGCTCTC
                      ____________________________________________________________
consensus             GTTAACTTCACCAGAAGAGAAACGTCTCTTGAGGTCAAGGTATTTAAGTCTACAGCTCTC
 
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rJMFF015H08+          AGGCGATAGCAGCATCGTCGGAACGGAGCTCCGTTTCTGGAGCTCGTCGGCGACAGATTC
                      ____________________________________________________________
consensus             AGGCGATAGCAGCATCGTCGGAACGGAGCTCCGTTTCTGGAGCTCGTCGGCGACAGATTC
 
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rJMFF015H08+          CCAACTCTTGGTGCCATGGCGGTTGACGGCGCCTGCTAACAGCAGCTCCTCCCACGTGCC
                      ____________________________________________________________
consensus             CCAACTCTTGGTGCCATGGCGGTTGACGGCGCCTGCTAACAGCAGCTCCTCCCACGTGCC
 
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rJMFF015H08+          CCAACGTGCCTCCTTTTCCGGCGTGTTATCTGCCGTTCCGTCCGATTTGGCCATAACCGA
                      ____________________________________________________________
consensus             CCAACGTGCCTCCTTTTCCGGCGTGTTATCTGCCGTTCCGTCCGATTTGGCCATAACCGA
 
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rJMFF015H08+          CTACTCCGTATTAAAAATGTGCCGGGCGAATCCGTACCGTCTGTTTATGTTCTCTCTTTT
                      ____________________________________________________________
consensus             CTACTCCGTATTAAAAATGTGCCGGGCGAATCCGTACCGTCTGTTTATGTTCTCTCTTTT
 
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rJMFF015H08+          TCTCCGTCGTCTAGACTCTATAGTCTAGTCTCTTTTCTCCCTATACTATACCTTTGTCGG
                      ____________________________________________________________
consensus             TCTCCGTCGTCTAGACTCTATAGTCTAGTCTCTTTTCTCCCTATACTATACCTTTGTCGG
 
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rJMFF015H08+          ACTTCGGGCTGGGCTGGGTTGGGCTGGACTGTACTGGTGATCTGATTCGAGATTGATTAT
                      ____________________________________________________________
consensus             ACTTCGGGCTGGGCTGGGTTGGGCTGGACTGTACTGGTGATCTGATTCGAGATTGATTAT
 
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rJMFF015H08+          TATTGATTTATTGATAAGATTTGTTCTTTCTGCTTTTCTTCTTTTGGGGTCTTTTTTTTG
                      ____________________________________________________________
consensus             TATTGATTTATTGATAAGATTTGTTCTTTCTGCTTTTCTTCTTTTGGGGTCTTTTTTTTG