Contig 013666:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014I15Sequence282013666 (2)ref|XP_003597652.1|1e-20Agglutinin alpha chain [Medicago truncatula]
JMFN044J16Sequence626013666 (2)ref|XP_006343016.1|2e-52PREDICTED: agglutinin-like [Solanum tuberosum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044J16+                                  ACAAGGAACGTAACTTAAGTTATGGTGCTGCAGCTTT
                      ____________________________________________________________
consensus                                    ACAAGGAACGTAACTTAAGTTATGGTGCTGCAGCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044J16+           TATTCTGGTGCCCAACCACAGTGGTGGTACGTTTCTTGCGTGTTTTTTTACCCTTTTGAT
                      ____________________________________________________________
consensus             TATTCTGGTGCCCAACCACAGTGGTGGTACGTTTCTTGCGTGTTTTTTTACCCTTTTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044J16+           TGGCGGCGGCGGCGTTAGGCGTCTGGATACAAGCAATGTAGCAGCCAATTGAGTCTATAT
                      ____________________________________________________________
consensus             TGGCGGCGGCGGCGTTAGGCGTCTGGATACAAGCAATGTAGCAGCCAATTGAGTCTATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044J16+           ACCACCCATTTCTCCCCTTCAACCCACCAATCTTACCTCCTTCCACGGGCACTGAAAAGG
                      ____________________________________________________________
consensus             ACCACCCATTTCTCCCCTTCAACCCACCAATCTTACCTCCTTCCACGGGCACTGAAAAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044J16+           GGGTTCCTTCTTCCAACCCAAATGGCCCAAATGTCCTCTGCAGGTTGCTTTTAAAGGTGA
                      ____________________________________________________________
consensus             GGGTTCCTTCTTCCAACCCAAATGGCCCAAATGTCCTCTGCAGGTTGCTTTTAAAGGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044J16+           GCGATCGTATCACAAGGCTGCCACGTTCTGGTCCATAGTAGCCACTAATACTGGTTAGGT
                      ____________________________________________________________
consensus             GCGATCGTATCACAAGGCTGCCACGTTCTGGTCCATAGTAGCCACTAATACTGGTTAGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044J16+           ATTCCTCTGGAAATTGTAGCTTTACCTCCCCAGTTTTGTCACCACCATTTCCTCCATGCT
rJMFF014I15-                            GCTTTACATCCCCAGTTTTGTCACCACCATTTCCTCCATGCT
                      ____________________________________________________________
consensus             ATTCCTCTGGAAATTGTAGCTTTACCTCCCCAGTTTTGTCACCACCATTTCCTCCATGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044J16+           TTTTTTCTGCAATAAAAGGCCTGCCATTTTTATTGTAAACTACCTTTATGGAGTCAATAC
rJMFF014I15-          TTTTTTCTGCAATAAAAGGCCTGCCATTTTTATTGTAAACTACCTTTATGGAGTCAATAC
                      ____________________________________________________________
consensus             TTTTTTCTGCAATAAAAGGCCTGCCATTTTTATTGTAAACTACCTTTATGGAGTCAATAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044J16+           AACGGCCATAGACGAGGCTTATCTCTCTTATTCCATCGATGCTACCATCATCCCTGCACT
rJMFF014I15-          AACGGCCATAGACGAGGCTTATCTCTCTTATTCCATCGATGCTACCATCATCCCTGCACT
                      ____________________________________________________________
consensus             AACGGCCATAGACGAGGCTTATCTCTCTTATTCCATCGATGCTACCATCATCCCTGCACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044J16+           CACTACTGCCGCCTCCATGAACACCCCATGGTCCAATTTCTATTCTTTTCTTCACTGCAC
rJMFF014I15-          CACTACTGCCGCCTCCATGAACACCCCATGGTCCAATTTCTATTCTTTTCTTCACTGCAC
                      ____________________________________________________________
consensus             CACTACTGCCGCCTCCATGAACACCCCATGGTCCAATTTCTATTCTTTTCTTCACTGCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044J16+           TAGCTTCTTCCTGCACCATTGTTG-TGATCCAAGAGAGTACGTGCAGAAG          
rJMFF014I15-          TAGCTTCTTCCTGCACCATTGTTGNTGATCCAAGAGAGTACGTGCAGAAGAAACTGATGA
                      ____________________________________________________________
consensus             TAGCTTCTTCCTGCACCATTGTTGNTGATCCAAGAGAGTACGTGCAGAAGAAACTGATGA